Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:48:57 (80615): wrapper (7.7.26015): starting
11:48:57 (80615): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 11:48:57] Arguments: --nthreads 8
[2025-06-05 11:48:57] Threads: 8
[2025-06-05 11:48:57] Checking for CVMFS
[2025-06-05 11:48:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:48:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:48:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:48:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:48:59] 2.11.2.0 12263 12777 262804 146825 2 69 11198941 18432001 26184 130560 0 97495886 99.282 133913271 60718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 11:48:59] CVMFS is ok
[2025-06-05 11:48:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:48:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:48:59] Further information can be found at the LHC@home message board.
[2025-06-05 11:48:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:48:59] Checking for apptainer binary...
[2025-06-05 11:48:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:48:59] Running /usr/bin/apptainer --version
[2025-06-05 11:48:59] apptainer version 1.3.2-1.el7
[2025-06-05 11:48:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:49:19] c-212-14.aglt2.org
[2025-06-05 11:49:19] apptainer works
[2025-06-05 11:49:19] Set ATHENA_PROC_NUMBER=8
[2025-06-05 11:49:19] Set ATHENA_CORE_NUMBER=8
[2025-06-05 11:49:19] Starting ATLAS job with PandaID=6668231808
[2025-06-05 11:49:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:08:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:08:15] 2025-06-05 19:07:53,376 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:08:15] 2025-06-05 19:07:53,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:08:15] 2025-06-05 19:07:53,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:08:15] 2025-06-05 19:07:53,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:08:15] 2025-06-05 19:07:53,387 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:08:15] 2025-06-05 19:07:53,387 | INFO     | sum of square deviations: 2093408863.8095198
[2025-06-05 15:08:15] 2025-06-05 19:07:53,388 | INFO     | sum of deviations: 24422417062.984123
[2025-06-05 15:08:15] 2025-06-05 19:07:53,388 | INFO     | mean x: 1749144677.0317461
[2025-06-05 15:08:15] 2025-06-05 19:07:53,388 | INFO     | mean y: 2451646.502645503
[2025-06-05 15:08:15] 2025-06-05 19:07:53,388 | INFO     | -- intersect: -20403662775.039677
[2025-06-05 15:08:15] 2025-06-05 19:07:53,388 | INFO     | intersect: -20403662775.039677
[2025-06-05 15:08:15] 2025-06-05 19:07:53,400 | INFO     | chi2: 2.9640692297683326
[2025-06-05 15:08:15] 2025-06-05 19:07:53,400 | INFO     | sum of square deviations: 1931621613.8043506
[2025-06-05 15:08:15] 2025-06-05 19:07:53,401 | INFO     | sum of deviations: 36178297351.20652
[2025-06-05 15:08:15] 2025-06-05 19:07:53,401 | INFO     | mean x: 1749144524.5326087
[2025-06-05 15:08:15] 2025-06-05 19:07:53,401 | INFO     | mean y: 2462469.0489130435
[2025-06-05 15:08:15] 2025-06-05 19:07:53,401 | INFO     | -- intersect: -32758131151.635773
[2025-06-05 15:08:15] 2025-06-05 19:07:53,401 | INFO     | intersect: -32758131151.635773
[2025-06-05 15:08:15] 2025-06-05 19:07:53,404 | INFO     | chi2: 2.1666459526564976
[2025-06-05 15:08:15] 2025-06-05 19:07:53,404 | INFO     | current chi2=2.1666459526564976 (change=26.902990966043006 %)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,404 | INFO     | sum of square deviations: 1778392663.7988853
[2025-06-05 15:08:15] 2025-06-05 19:07:53,405 | INFO     | sum of deviations: 35026967684.27933
[2025-06-05 15:08:15] 2025-06-05 19:07:53,405 | INFO     | mean x: 1749144372.0335195
[2025-06-05 15:08:15] 2025-06-05 19:07:53,405 | INFO     | mean y: 2461323.620111732
[2025-06-05 15:08:15] 2025-06-05 19:07:53,405 | INFO     | -- intersect: -34448436187.102936
[2025-06-05 15:08:15] 2025-06-05 19:07:53,405 | INFO     | intersect: -34448436187.102936
[2025-06-05 15:08:15] 2025-06-05 19:07:53,405 | INFO     | chi2: 2.1689737373884426
[2025-06-05 15:08:15] 2025-06-05 19:07:53,405 | INFO     | current chi2=2.1689737373884426 (change=-0.1074372455310883 %)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,408 | INFO     | right removable region: 178
[2025-06-05 15:08:15] 2025-06-05 19:07:53,408 | INFO     | sum of square deviations: 1931617953.8043506
[2025-06-05 15:08:15] 2025-06-05 19:07:53,409 | INFO     | sum of deviations: -13906692215.489126
[2025-06-05 15:08:15] 2025-06-05 19:07:53,409 | INFO     | mean x: 1749144829.5326087
[2025-06-05 15:08:15] 2025-06-05 19:07:53,409 | INFO     | mean y: 2487445.8315217393
[2025-06-05 15:08:15] 2025-06-05 19:07:53,409 | INFO     | -- intersect: 12595463575.876331
[2025-06-05 15:08:15] 2025-06-05 19:07:53,409 | INFO     | intersect: 12595463575.876331
[2025-06-05 15:08:15] 2025-06-05 19:07:53,409 | INFO     | chi2: 0.859607881616397
[2025-06-05 15:08:15] 2025-06-05 19:07:53,409 | INFO     | current chi2=0.859607881616397 (change=70.99906193204593 %)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,412 | INFO     | sum of square deviations: 1778385343.7988853
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | sum of deviations: -13892922800.162018
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | mean x: 1749144982.0335195
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | mean y: 2487398.8603351954
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | -- intersect: 13666981590.975426
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | intersect: 13666981590.975426
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | chi2: 0.8523052196864038
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | current chi2=0.8523052196864038 (change=0.8495340824773894 %)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | left removable region: 20
[2025-06-05 15:08:15] 2025-06-05 19:07:53,413 | INFO     | sum of square deviations: 1223024599.2721517
[2025-06-05 15:08:15] 2025-06-05 19:07:53,416 | INFO     | sum of deviations: 3292629270.917722
[2025-06-05 15:08:15] 2025-06-05 19:07:53,416 | INFO     | mean x: 1749144951.5379746
[2025-06-05 15:08:15] 2025-06-05 19:07:53,416 | INFO     | mean y: 2493332.930379747
[2025-06-05 15:08:15] 2025-06-05 19:07:53,416 | INFO     | -- intersect: -4706558202.042318
[2025-06-05 15:08:15] 2025-06-05 19:07:53,416 | INFO     | intersect: -4706558202.042318
[2025-06-05 15:08:15] 2025-06-05 19:07:53,417 | INFO     | chi2: 0.0004670524734878609
[2025-06-05 15:08:15] 2025-06-05 19:07:53,417 | INFO     | -- intersect: -4706558202.042318
[2025-06-05 15:08:15] 2025-06-05 19:07:53,417 | INFO     | current memory leak: 2.69 B/s (using 158 data points, chi2=0.00)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,419 | INFO     | ..............................
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . Timing measurements:
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . get job = 0 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . initial setup = 7 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . payload setup = 83 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . stage-in = 0 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . payload execution = 11552 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . stage-out = 3 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | . log creation = 0 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,420 | INFO     | ..............................
[2025-06-05 15:08:15] 2025-06-05 19:07:53,578 | INFO     | 
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | job summary report
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | --------------------------------------------------
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | PanDA job id: 6668231808
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | task id: 44871837
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | errors: (none)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | pilot state: finished 
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | transexitcode: 0
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | exeerrorcode: 0
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | exeerrordiag: 
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | exitcode: 0
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | exitmsg: OK
[2025-06-05 15:08:15] 2025-06-05 19:07:53,583 | INFO     | cpuconsumptiontime: 44301 s
[2025-06-05 15:08:15] 2025-06-05 19:07:53,588 | INFO     | nevents: 400
[2025-06-05 15:08:15] 2025-06-05 19:07:53,589 | INFO     | neventsw: 0
[2025-06-05 15:08:15] 2025-06-05 19:07:53,589 | INFO     | pid: 5228
[2025-06-05 15:08:15] 2025-06-05 19:07:53,589 | INFO     | pgrp: 5228
[2025-06-05 15:08:15] 2025-06-05 19:07:53,589 | INFO     | corecount: 8
[2025-06-05 15:08:15] 2025-06-05 19:07:53,589 | INFO     | event service: False
[2025-06-05 15:08:15] 2025-06-05 19:07:53,591 | INFO     | sizes: {0: 2396564, 1: 2397420, 2: 2397420, 12: 2397448, 23: 2397476, 34: 2397504, 44: 2397660, 52: 2397894, 55: 2397922, 11636: 2427382, 11641: 2436323, 11644: 24
[2025-06-05 15:08:15] 2025-06-05 19:07:53,591 | INFO     | --------------------------------------------------
[2025-06-05 15:08:15] 2025-06-05 19:07:53,592 | INFO     | 
[2025-06-05 15:08:15] 2025-06-05 19:07:53,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-05 15:08:15] 2025-06-05 19:07:53,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:08:15] 2025-06-05 19:07:53,622 | INFO     | job 6668231808 has completed (purged errors)
[2025-06-05 15:08:15] 2025-06-05 19:07:53,622 | INFO     | overall cleanup function is called
[2025-06-05 15:08:15] 2025-06-05 19:07:54,318 | INFO     | PID=86126 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 15:08:15] 2025-06-05 19:07:54,318 | INFO     | .. there are 22 such processes running
[2025-06-05 15:08:15] 2025-06-05 19:07:54,630 | INFO     | --- collectZombieJob: --- 10, [5228]
[2025-06-05 15:08:15] 2025-06-05 19:07:54,630 | INFO     | zombie collector waiting for pid 5228
[2025-06-05 15:08:15] 2025-06-05 19:07:54,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:08:15] 2025-06-05 19:07:54,630 | INFO     | collected zombie processes
[2025-06-05 15:08:15] 2025-06-05 19:07:54,630 | INFO     | will attempt to kill all subprocesses of pid=5228
[2025-06-05 15:08:15] 2025-06-05 19:07:55,291 | INFO     | process IDs to be killed: [5228] (in reverse order)
[2025-06-05 15:08:15] 2025-06-05 19:07:55,474 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:08:15] 2025-06-05 19:07:55,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:08:15] 2025-06-05 19:07:55,485 | INFO     | did not find any defunct processes belonging to 5228
[2025-06-05 15:08:15] 2025-06-05 19:07:55,501 | INFO     | did not find any defunct processes belonging to 5228
[2025-06-05 15:08:15] 2025-06-05 19:07:55,502 | INFO     | ready for new job
[2025-06-05 15:08:15] 2025-06-05 19:07:55,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:08:15] 2025-06-05 19:07:55,504 | INFO     | **************************************
[2025-06-05 15:08:15] 2025-06-05 19:07:55,504 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:08:15] 2025-06-05 19:07:55,505 | INFO     | **************************************
[2025-06-05 15:08:15] 2025-06-05 19:07:55,505 | INFO     | 
[2025-06-05 15:08:15] 2025-06-05 19:07:55,509 | INFO     | architecture information:
[2025-06-05 15:08:15] 2025-06-05 19:07:55,510 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:08:15] 2025-06-05 19:07:55,638 | INFO     | cat /etc/os-release:
[2025-06-05 15:08:15] NAME="CentOS Linux"
[2025-06-05 15:08:15] VERSION="7 (Core)"
[2025-06-05 15:08:15] ID="centos"
[2025-06-05 15:08:15] ID_LIKE="rhel fedora"
[2025-06-05 15:08:15] VERSION_ID="7"
[2025-06-05 15:08:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:08:15] ANSI_COLOR="0;31"
[2025-06-05 15:08:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:08:15] HOME_URL="https://www.centos.org/"
[2025-06-05 15:08:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:08:15] 
[2025-06-05 15:08:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:08:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:08:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:08:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:08:15] 
[2025-06-05 15:08:15] 2025-06-05 19:07:55,639 | INFO     | **************************************
[2025-06-05 15:08:15] 2025-06-05 19:07:56,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-05 15:08:15] 2025-06-05 19:07:56,275 | INFO     | sufficient remaining disk space (105482551296 B)
[2025-06-05 15:08:15] 2025-06-05 19:07:56,276 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:08:15] 2025-06-05 19:07:56,276 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:08:15] 2025-06-05 19:07:56,276 | INFO     | update_server=False
[2025-06-05 15:08:15] 2025-06-05 19:07:56,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:08:15] 2025-06-05 19:07:56,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:08:15] 2025-06-05 19:07:56,325 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:08:15] 2025-06-05 19:07:56,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:08:15] 2025-06-05 19:07:56,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:08:15] 2025-06-05 19:07:57,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:08:15] 2025-06-05 19:07:57,068 | INFO     | aborting loop
[2025-06-05 15:08:15] 2025-06-05 19:07:57,231 | INFO     | all data control threads have been joined
[2025-06-05 15:08:15] 2025-06-05 19:07:57,245 | INFO     | all payload control threads have been joined
[2025-06-05 15:08:15] 2025-06-05 19:07:57,282 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:57,436 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:57,703 | INFO     | all job control threads have been joined
[2025-06-05 15:08:15] 2025-06-05 19:07:57,817 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:57,911 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,074 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,103 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,104 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,238 | INFO     | [data] control thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,251 | INFO     | [payload] control thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,285 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,352 | INFO     | [job] validate thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,483 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:58,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:08:15] 2025-06-05 19:07:58,709 | INFO     | [job] control thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:07:59,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:08:15] 2025-06-05 19:07:59,599 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:08:03,273 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:08:06,890 | INFO     | job.realtimelogging is not enabled
[2025-06-05 15:08:15] 2025-06-05 19:08:07,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:08:15] 2025-06-05 19:08:08,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076507555648)>', '<ExcThread(monitor, started 140075929171712)>']
[2025-06-05 15:08:15] 2025-06-05 19:08:08,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:08:15] 2025-06-05 19:08:08,395 | INFO     | [monitor] control thread has ended
[2025-06-05 15:08:15] 2025-06-05 19:08:13,362 | INFO     | all workflow threads have been joined
[2025-06-05 15:08:15] 2025-06-05 19:08:13,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:08:15] 2025-06-05 19:08:13,362 | INFO     | traces error code: 0
[2025-06-05 15:08:15] 2025-06-05 19:08:13,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:08:15] 2025-06-05 19:08:13,790 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:08:15] 2025-06-05 19:08:13,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:08:15] 2025-06-05 19:08:13,799 [wrapper] pilotpid: 86126
[2025-06-05 15:08:15] 2025-06-05 19:08:13,834 [wrapper] Pilot exit status: 0
[2025-06-05 15:08:15] 2025-06-05 19:08:14,011 [wrapper] pandaids: 6668231808
[2025-06-05 15:08:15] 2025-06-05 19:08:14,252 [wrapper] cleanup supervisor_pilot 80954 86127
[2025-06-05 15:08:15] 2025-06-05 19:08:14,277 [wrapper] Test setup, not cleaning
[2025-06-05 15:08:15] 2025-06-05 19:08:14,279 [wrapper] apfmon messages muted
[2025-06-05 15:08:15] 2025-06-05 19:08:14,281 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:08:15] 2025-06-05 19:08:14,283 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:08:15]  *** Error codes and diagnostics ***
[2025-06-05 15:08:15]     "exeErrorCode": 0,
[2025-06-05 15:08:15]     "exeErrorDiag": "",
[2025-06-05 15:08:15]     "pilotErrorCode": 0,
[2025-06-05 15:08:15]     "pilotErrorDiag": "",
[2025-06-05 15:08:15]  *** Listing of results directory ***
[2025-06-05 15:08:15] total 416548
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas    495897 May 28 04:01 pilot3.tar.gz
[2025-06-05 15:08:15] -rwx------ 1 boincer umatlas     37140 May 28 04:03 runpilot2-wrapper.sh
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas      5111 May 28 04:03 queuedata.json
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas       100 Jun  5 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:08:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 11:48 run_atlas
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas       105 Jun  5 11:48 job.xml
[2025-06-05 15:08:15] -rw-r--r-- 2 boincer umatlas 224414467 Jun  5 11:48 EVNT.44871834._003162.pool.root.1
[2025-06-05 15:08:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 11:48 start_atlas.sh
[2025-06-05 15:08:15] drwxrwx--x 2 boincer umatlas      4096 Jun  5 11:48 shared
[2025-06-05 15:08:15] -rw-r--r-- 2 boincer umatlas    508875 Jun  5 11:48 input.tar.gz
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas         0 Jun  5 11:48 boinc_lockfile
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 11:49 pandaJob.out
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas    983229 Jun  5 11:51 agis_schedconf.cvmfs.json
[2025-06-05 15:08:15] drwx------ 4 boincer umatlas      4096 Jun  5 11:51 pilot3
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas      6388 Jun  5 15:00 init_data.xml
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas 195455037 Jun  5 15:06 HITS.44871837._080990.pool.root.1
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas       530 Jun  5 15:06 boinc_task_state.xml
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas      1077 Jun  5 15:07 memory_monitor_summary.json
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas   1598969 Jun  5 15:07 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas    374337 Jun  5 15:07 log.44871837._080990.job.log.tgz.1
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas        95 Jun  5 15:07 pilot_heartbeat.json
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas      7748 Jun  5 15:07 heartbeat.json
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 15:08 boinc_mmap_file
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas        28 Jun  5 15:08 wrapper_checkpoint.txt
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas      4426 Jun  5 15:08 pilotlog.txt
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas   1047736 Jun  5 15:08 log.44871837._080990.job.log.1
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas       357 Jun  5 15:08 output.list
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas       620 Jun  5 15:08 runtime_log
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas   1443840 Jun  5 15:08 result.tar.gz
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 15:08 runtime_log.err
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas       663 Jun  5 15:08 pCTLDmWwQe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEbbKDmTSrxDm.diag
[2025-06-05 15:08:15] -rw-r--r-- 1 boincer umatlas     20983 Jun  5 15:08 stderr.txt
[2025-06-05 15:08:15] HITS file was successfully produced:
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas 195455037 Jun  5 15:06 shared/HITS.pool.root.1
[2025-06-05 15:08:15]  *** Contents of shared directory: ***
[2025-06-05 15:08:15] total 411964
[2025-06-05 15:08:15] -rw-r--r-- 2 boincer umatlas 224414467 Jun  5 11:48 ATLAS.root_0
[2025-06-05 15:08:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 11:48 start_atlas.sh
[2025-06-05 15:08:15] -rw-r--r-- 2 boincer umatlas    508875 Jun  5 11:48 input.tar.gz
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas 195455037 Jun  5 15:06 HITS.pool.root.1
[2025-06-05 15:08:15] -rw------- 1 boincer umatlas   1443840 Jun  5 15:08 result.tar.gz
15:08:16 (80615): run_atlas exited; CPU time 43936.691515
15:08:16 (80615): called boinc_finish(0)

</stderr_txt>
]]>

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