Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:59 (1052292): wrapper (7.7.26015): starting
12:04:59 (1052292): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 12:04:59] Arguments: --nthreads 4
[2025-06-06 12:04:59] Threads: 4
[2025-06-06 12:04:59] Checking for CVMFS
[2025-06-06 12:04:59] No cvmfs_config command found, will try listing directly
[2025-06-06 12:04:59] CVMFS is ok
[2025-06-06 12:04:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 12:04:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 12:04:59] Further information can be found at the LHC@home message board.
[2025-06-06 12:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 12:04:59] Checking for apptainer binary...
[2025-06-06 12:04:59] which: no apptainer in ((null))
[2025-06-06 12:04:59] apptainer is not installed, using version from CVMFS
[2025-06-06 12:04:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 12:04:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-06-06 12:04:59] apptainer works
[2025-06-06 12:04:59] Set ATHENA_PROC_NUMBER=4
[2025-06-06 12:04:59] Set ATHENA_CORE_NUMBER=4
[2025-06-06 12:04:59] Starting ATLAS job with PandaID=6680893967
[2025-06-06 12:04:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 15:08:23]  *** The last 200 lines of the pilot log: ***
[2025-06-06 15:08:23] 2025-06-06 13:08:03,727 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 15:08:23] 2025-06-06 13:08:03,727 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 15:08:23] 2025-06-06 13:08:03,731 | INFO     | fitting pss+swap vs Time
[2025-06-06 15:08:23] 2025-06-06 13:08:03,731 | INFO     | sum of square deviations: 1808350185.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,732 | INFO     | sum of deviations: 18818960580.5
[2025-06-06 15:08:23] 2025-06-06 13:08:03,732 | INFO     | mean x: 1749209792.5
[2025-06-06 15:08:23] 2025-06-06 13:08:03,733 | INFO     | mean y: 2320804.1944444445
[2025-06-06 15:08:23] 2025-06-06 13:08:03,733 | INFO     | -- intersect: -18201183365.039284
[2025-06-06 15:08:23] 2025-06-06 13:08:03,733 | INFO     | intersect: -18201183365.039284
[2025-06-06 15:08:23] 2025-06-06 13:08:03,733 | INFO     | chi2: 2.207482095179558
[2025-06-06 15:08:23] 2025-06-06 13:08:03,734 | INFO     | sum of square deviations: 1661798600.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,735 | INFO     | sum of deviations: 29209963948.000004
[2025-06-06 15:08:23] 2025-06-06 13:08:03,735 | INFO     | mean x: 1749209640.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,735 | INFO     | mean y: 2331353.2285714285
[2025-06-06 15:08:23] 2025-06-06 13:08:03,735 | INFO     | -- intersect: -30744084320.664803
[2025-06-06 15:08:23] 2025-06-06 13:08:03,735 | INFO     | intersect: -30744084320.664803
[2025-06-06 15:08:23] 2025-06-06 13:08:03,736 | INFO     | chi2: 1.4359889823026
[2025-06-06 15:08:23] 2025-06-06 13:08:03,736 | INFO     | current chi2=1.4359889823026 (change=34.949008853193185 %)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,736 | INFO     | sum of square deviations: 1523386702.5
[2025-06-06 15:08:23] 2025-06-06 13:08:03,737 | INFO     | sum of deviations: 27881839191.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,737 | INFO     | mean x: 1749209487.5
[2025-06-06 15:08:23] 2025-06-06 13:08:03,737 | INFO     | mean y: 2329894.3294117646
[2025-06-06 15:08:23] 2025-06-06 13:08:03,738 | INFO     | -- intersect: -32012638834.102512
[2025-06-06 15:08:23] 2025-06-06 13:08:03,738 | INFO     | intersect: -32012638834.102512
[2025-06-06 15:08:23] 2025-06-06 13:08:03,738 | INFO     | chi2: 1.4370459843954322
[2025-06-06 15:08:23] 2025-06-06 13:08:03,738 | INFO     | current chi2=1.4370459843954322 (change=-0.07360795283661012 %)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,738 | INFO     | right removable region: 169
[2025-06-06 15:08:23] 2025-06-06 13:08:03,739 | INFO     | sum of square deviations: 1661798600.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,740 | INFO     | sum of deviations: -5621339099.999999
[2025-06-06 15:08:23] 2025-06-06 13:08:03,740 | INFO     | mean x: 1749209945.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,740 | INFO     | mean y: 2345884.44
[2025-06-06 15:08:23] 2025-06-06 13:08:03,740 | INFO     | -- intersect: 5919369919.685514
[2025-06-06 15:08:23] 2025-06-06 13:08:03,740 | INFO     | intersect: 5919369919.685514
[2025-06-06 15:08:23] 2025-06-06 13:08:03,741 | INFO     | chi2: 0.8119060189230104
[2025-06-06 15:08:23] 2025-06-06 13:08:03,741 | INFO     | current chi2=0.8119060189230104 (change=63.220267077320536 %)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,741 | INFO     | sum of square deviations: 1523386702.5
[2025-06-06 15:08:23] 2025-06-06 13:08:03,742 | INFO     | sum of deviations: -5017622069.500001
[2025-06-06 15:08:23] 2025-06-06 13:08:03,742 | INFO     | mean x: 1749210097.5
[2025-06-06 15:08:23] 2025-06-06 13:08:03,742 | INFO     | mean y: 2345190.3588235294
[2025-06-06 15:08:23] 2025-06-06 13:08:03,743 | INFO     | -- intersect: 5763768192.807703
[2025-06-06 15:08:23] 2025-06-06 13:08:03,743 | INFO     | intersect: 5763768192.807703
[2025-06-06 15:08:23] 2025-06-06 13:08:03,743 | INFO     | chi2: 0.8077291830394221
[2025-06-06 15:08:23] 2025-06-06 13:08:03,743 | INFO     | current chi2=0.8077291830394221 (change=0.5144481979735607 %)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,743 | INFO     | left removable region: 20
[2025-06-06 15:08:23] 2025-06-06 13:08:03,744 | INFO     | sum of square deviations: 1025693650.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,744 | INFO     | sum of deviations: 5832426733.000002
[2025-06-06 15:08:23] 2025-06-06 13:08:03,745 | INFO     | mean x: 1749210067.0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,745 | INFO     | mean y: 2354928.2684563757
[2025-06-06 15:08:23] 2025-06-06 13:08:03,745 | INFO     | -- intersect: -9944220792.857948
[2025-06-06 15:08:23] 2025-06-06 13:08:03,745 | INFO     | intersect: -9944220792.857948
[2025-06-06 15:08:23] 2025-06-06 13:08:03,745 | INFO     | chi2: 0.0010190144428336631
[2025-06-06 15:08:23] 2025-06-06 13:08:03,745 | INFO     | -- intersect: -9944220792.857948
[2025-06-06 15:08:23] 2025-06-06 13:08:03,746 | INFO     | current memory leak: 5.69 B/s (using 149 data points, chi2=0.00)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,746 | INFO     | could have reported an average CPU frequency of 2660 MHz (10 samples)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,746 | INFO     | ..............................
[2025-06-06 15:08:23] 2025-06-06 13:08:03,746 | INFO     | . Timing measurements:
[2025-06-06 15:08:23] 2025-06-06 13:08:03,746 | INFO     | . get job = 0 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,747 | INFO     | . initial setup = 1 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,747 | INFO     | . payload setup = 6 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,747 | INFO     | . stage-in = 0 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,747 | INFO     | . payload execution = 10943 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,747 | INFO     | . stage-out = 0 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,747 | INFO     | . log creation = 0 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,747 | INFO     | ..............................
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | 
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | job summary report
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | --------------------------------------------------
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | PanDA job id: 6680893967
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | task id: 44871837
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | errors: (none)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 15:08:23] 2025-06-06 13:08:03,820 | INFO     | pilot state: finished 
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | transexitcode: 0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | exeerrorcode: 0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | exeerrordiag: 
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | exitcode: 0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | exitmsg: OK
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | cpuconsumptiontime: 42218 s
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | nevents: 400
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | neventsw: 0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | pid: 1063271
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | pgrp: 1063271
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | corecount: 4
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | event service: False
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | sizes: {0: 2397520, 1: 2397719, 4: 2397981, 11: 2398009, 10953: 2427291, 10954: 2436254, 10956: 2436438, 10961: 2436632}
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | --------------------------------------------------
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | 
[2025-06-06 15:08:23] 2025-06-06 13:08:03,821 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-06 15:08:23] 2025-06-06 13:08:03,834 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | job 6680893967 has completed (purged errors)
[2025-06-06 15:08:23] 2025-06-06 13:08:03,836 | INFO     | overall cleanup function is called
[2025-06-06 15:08:23] 2025-06-06 13:08:04,843 | INFO     | --- collectZombieJob: --- 10, [1063271]
[2025-06-06 15:08:23] 2025-06-06 13:08:04,843 | INFO     | zombie collector waiting for pid 1063271
[2025-06-06 15:08:23] 2025-06-06 13:08:04,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 15:08:23] 2025-06-06 13:08:04,843 | INFO     | collected zombie processes
[2025-06-06 15:08:23] 2025-06-06 13:08:04,843 | INFO     | will attempt to kill all subprocesses of pid=1063271
[2025-06-06 15:08:23] 2025-06-06 13:08:04,990 | INFO     | process IDs to be killed: [1063271] (in reverse order)
[2025-06-06 15:08:23] 2025-06-06 13:08:05,032 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 15:08:23] 2025-06-06 13:08:05,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 15:08:23] 2025-06-06 13:08:05,036 | INFO     | did not find any defunct processes belonging to 1063271
[2025-06-06 15:08:23] 2025-06-06 13:08:05,039 | INFO     | did not find any defunct processes belonging to 1063271
[2025-06-06 15:08:23] 2025-06-06 13:08:05,039 | INFO     | ready for new job
[2025-06-06 15:08:23] 2025-06-06 13:08:05,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 15:08:23] 2025-06-06 13:08:05,040 | INFO     | ***************************************
[2025-06-06 15:08:23] 2025-06-06 13:08:05,040 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-06 15:08:23] 2025-06-06 13:08:05,040 | INFO     | ***************************************
[2025-06-06 15:08:23] 2025-06-06 13:08:05,040 | INFO     | 
[2025-06-06 15:08:23] 2025-06-06 13:08:05,042 | INFO     | architecture information:
[2025-06-06 15:08:23] 2025-06-06 13:08:05,042 | INFO     | executing command: cat /etc/os-release
[2025-06-06 15:08:23] 2025-06-06 13:08:05,050 | INFO     | cat /etc/os-release:
[2025-06-06 15:08:23] NAME="CentOS Linux"
[2025-06-06 15:08:23] VERSION="7 (Core)"
[2025-06-06 15:08:23] ID="centos"
[2025-06-06 15:08:23] ID_LIKE="rhel fedora"
[2025-06-06 15:08:23] VERSION_ID="7"
[2025-06-06 15:08:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 15:08:23] ANSI_COLOR="0;31"
[2025-06-06 15:08:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 15:08:23] HOME_URL="https://www.centos.org/"
[2025-06-06 15:08:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 15:08:23] 
[2025-06-06 15:08:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 15:08:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 15:08:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 15:08:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 15:08:23] 
[2025-06-06 15:08:23] 2025-06-06 13:08:05,050 | INFO     | ***************************************
[2025-06-06 15:08:23] 2025-06-06 13:08:05,553 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-06 15:08:23] 2025-06-06 13:08:05,563 | INFO     | sufficient remaining disk space (1669833162752 B)
[2025-06-06 15:08:23] 2025-06-06 13:08:05,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 15:08:23] 2025-06-06 13:08:05,563 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 15:08:23] 2025-06-06 13:08:05,563 | INFO     | update_server=False
[2025-06-06 15:08:23] 2025-06-06 13:08:05,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 15:08:23] 2025-06-06 13:08:05,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 15:08:23] 2025-06-06 13:08:05,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 15:08:23] 2025-06-06 13:08:05,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 15:08:23] 2025-06-06 13:08:05,564 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 15:08:23] 2025-06-06 13:08:05,564 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 15:08:23] 2025-06-06 13:08:05,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 15:08:23] 2025-06-06 13:08:05,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 15:08:23] 2025-06-06 13:08:05,671 | INFO     | all data control threads have been joined
[2025-06-06 15:08:23] 2025-06-06 13:08:05,737 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 15:08:23] 2025-06-06 13:08:05,737 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 15:08:23] 2025-06-06 13:08:05,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 15:08:23] 2025-06-06 13:08:05,737 | INFO     | will abort loop
[2025-06-06 15:08:23] 2025-06-06 13:08:06,375 | INFO     | all job control threads have been joined
[2025-06-06 15:08:23] 2025-06-06 13:08:06,569 | INFO     | [job] retrieve thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:06,569 | INFO     | [job] queue monitor thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:06,582 | INFO     | all payload control threads have been joined
[2025-06-06 15:08:23] 2025-06-06 13:08:06,666 | INFO     | [payload] validate_post thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:06,677 | INFO     | [data] control thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:06,740 | INFO     | [job] job monitor thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:06,890 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:06,918 | INFO     | [payload] failed_post thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:07,163 | INFO     | [data] copytool_in thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:07,263 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:07,377 | INFO     | [job] control thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:07,443 | INFO     | [job] validate thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:07,570 | INFO     | [data] copytool_out thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:07,588 | INFO     | [payload] control thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:08,047 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:09,566 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:16,450 | INFO     | job.realtimelogging is not enabled
[2025-06-06 15:08:23] 2025-06-06 13:08:17,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 15:08:23] 2025-06-06 13:08:18,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22485934716736)>', '<ExcThread(monitor, started 22485359650560)>']
[2025-06-06 15:08:23] 2025-06-06 13:08:18,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 15:08:23] 2025-06-06 13:08:18,626 | INFO     | [monitor] control thread has ended
[2025-06-06 15:08:23] 2025-06-06 13:08:23,354 | INFO     | all workflow threads have been joined
[2025-06-06 15:08:23] 2025-06-06 13:08:23,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 15:08:23] 2025-06-06 13:08:23,355 | INFO     | traces error code: 0
[2025-06-06 15:08:23] 2025-06-06 13:08:23,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 15:08:23] 2025-06-06 13:08:23,434 [wrapper] ==== pilot stdout END ====
[2025-06-06 15:08:23] 2025-06-06 13:08:23,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 15:08:23] 2025-06-06 13:08:23,451 [wrapper] pilotpid: 1056401
[2025-06-06 15:08:23] 2025-06-06 13:08:23,453 [wrapper] Pilot exit status: 0
[2025-06-06 15:08:23] 2025-06-06 13:08:23,459 [wrapper] pandaids: 6680893967
[2025-06-06 15:08:23] 2025-06-06 13:08:23,485 [wrapper] cleanup supervisor_pilot 1228830 1056402
[2025-06-06 15:08:23] 2025-06-06 13:08:23,487 [wrapper] Test setup, not cleaning
[2025-06-06 15:08:23] 2025-06-06 13:08:23,489 [wrapper] apfmon messages muted
[2025-06-06 15:08:23] 2025-06-06 13:08:23,490 [wrapper] ==== wrapper stdout END ====
[2025-06-06 15:08:23] 2025-06-06 13:08:23,492 [wrapper] ==== wrapper stderr END ====
[2025-06-06 15:08:23]  *** Error codes and diagnostics ***
[2025-06-06 15:08:23]     "exeErrorCode": 0,
[2025-06-06 15:08:23]     "exeErrorDiag": "",
[2025-06-06 15:08:23]     "pilotErrorCode": 0,
[2025-06-06 15:08:23]     "pilotErrorDiag": "",
[2025-06-06 15:08:23]  *** Listing of results directory ***
[2025-06-06 15:08:23] total 417648
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc    529402 Jun  5 17:36 pilot3.tar.gz
[2025-06-06 15:08:23] -rwx------ 1 boinc boinc     37140 Jun  5 17:45 runpilot2-wrapper.sh
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc      5112 Jun  5 17:45 queuedata.json
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc       100 Jun  6 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 15:08:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 12:04 run_atlas
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc       105 Jun  6 12:04 job.xml
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc      6422 Jun  6 12:04 init_data.xml
[2025-06-06 15:08:23] -rw-r--r-- 2 boinc boinc 224958450 Jun  6 12:04 EVNT.44871834._003065.pool.root.1
[2025-06-06 15:08:23] -rw-r--r-- 2 boinc boinc     15095 Jun  6 12:04 start_atlas.sh
[2025-06-06 15:08:23] drwxrwx--x 2 boinc boinc      4096 Jun  6 12:04 shared
[2025-06-06 15:08:23] -rw-r--r-- 2 boinc boinc    541915 Jun  6 12:04 input.tar.gz
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc         0 Jun  6 12:04 boinc_lockfile
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc      2557 Jun  6 12:04 pandaJob.out
[2025-06-06 15:08:23] -rw------- 1 boinc boinc    987967 Jun  6 12:05 agis_schedconf.cvmfs.json
[2025-06-06 15:08:23] drwx------ 4 boinc boinc      4096 Jun  6 12:05 pilot3
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc       529 Jun  6 15:07 boinc_task_state.xml
[2025-06-06 15:08:23] -rw------- 1 boinc boinc 196121153 Jun  6 15:07 HITS.44871837._102307.pool.root.1
[2025-06-06 15:08:23] -rw------- 1 boinc boinc      1037 Jun  6 15:07 memory_monitor_summary.json
[2025-06-06 15:08:23] -rw------- 1 boinc boinc   1598969 Jun  6 15:07 agis_ddmendpoints.agis.ALL.json
[2025-06-06 15:08:23] -rw------- 1 boinc boinc    295955 Jun  6 15:07 log.44871837._102307.job.log.tgz.1
[2025-06-06 15:08:23] -rw------- 1 boinc boinc      7763 Jun  6 15:08 heartbeat.json
[2025-06-06 15:08:23] -rw------- 1 boinc boinc        95 Jun  6 15:08 pilot_heartbeat.json
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc      8192 Jun  6 15:08 boinc_mmap_file
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc        27 Jun  6 15:08 wrapper_checkpoint.txt
[2025-06-06 15:08:23] -rw------- 1 boinc boinc      4749 Jun  6 15:08 pilotlog.txt
[2025-06-06 15:08:23] -rw------- 1 boinc boinc   1048901 Jun  6 15:08 log.44871837._102307.job.log.1
[2025-06-06 15:08:23] -rw------- 1 boinc boinc       357 Jun  6 15:08 output.list
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc       620 Jun  6 15:08 runtime_log
[2025-06-06 15:08:23] -rw------- 1 boinc boinc   1361920 Jun  6 15:08 result.tar.gz
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc      9027 Jun  6 15:08 runtime_log.err
[2025-06-06 15:08:23] -rw------- 1 boinc boinc       663 Jun  6 15:08 FUJODmwxRh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmu5nKDmmJYoFm.diag
[2025-06-06 15:08:23] -rw-r--r-- 1 boinc boinc     20633 Jun  6 15:08 stderr.txt
[2025-06-06 15:08:23] HITS file was successfully produced:
[2025-06-06 15:08:23] -rw------- 1 boinc boinc 196121153 Jun  6 15:07 shared/HITS.pool.root.1
[2025-06-06 15:08:23]  *** Contents of shared directory: ***
[2025-06-06 15:08:23] total 413100
[2025-06-06 15:08:23] -rw-r--r-- 2 boinc boinc 224958450 Jun  6 12:04 ATLAS.root_0
[2025-06-06 15:08:23] -rw-r--r-- 2 boinc boinc     15095 Jun  6 12:04 start_atlas.sh
[2025-06-06 15:08:23] -rw-r--r-- 2 boinc boinc    541915 Jun  6 12:04 input.tar.gz
[2025-06-06 15:08:23] -rw------- 1 boinc boinc 196121153 Jun  6 15:07 HITS.pool.root.1
[2025-06-06 15:08:23] -rw------- 1 boinc boinc   1361920 Jun  6 15:08 result.tar.gz
15:08:24 (1052292): run_atlas exited; CPU time 42558.797973
15:08:24 (1052292): called boinc_finish(0)

</stderr_txt>
]]>

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