Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:36:48 (26815): wrapper (7.7.26015): starting
11:36:48 (26815): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 11:36:48] Arguments: --nthreads 8
[2025-06-05 11:36:48] Threads: 8
[2025-06-05 11:36:48] Checking for CVMFS
[2025-06-05 11:36:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:36:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:36:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:36:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:36:48] 2.11.2.0 2979 37263 73980 146824 1 1 14855836 20275200 1 130560 0 12185078 99.981 6166357 7637 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 11:36:48] CVMFS is ok
[2025-06-05 11:36:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:36:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:36:48] Further information can be found at the LHC@home message board.
[2025-06-05 11:36:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:36:48] Checking for apptainer binary...
[2025-06-05 11:36:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:36:48] Running /usr/bin/apptainer --version
[2025-06-05 11:36:49] apptainer version 1.3.2-1.el7
[2025-06-05 11:36:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:36:50] c-115-8.aglt2.org
[2025-06-05 11:36:50] apptainer works
[2025-06-05 11:36:50] Set ATHENA_PROC_NUMBER=8
[2025-06-05 11:36:50] Set ATHENA_CORE_NUMBER=8
[2025-06-05 11:36:51] Starting ATLAS job with PandaID=6680888686
[2025-06-05 11:36:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:28:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:28:06] 2025-06-05 17:27:50,641 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:28:06] 2025-06-05 17:27:50,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:28:06] 2025-06-05 17:27:50,642 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:28:06] 2025-06-05 17:27:50,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:28:06] 2025-06-05 17:27:50,645 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:28:06] 2025-06-05 17:27:50,645 | INFO     | sum of square deviations: 401533110.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,646 | INFO     | sum of deviations: 8337331464.999999
[2025-06-05 13:28:06] 2025-06-05 17:27:50,646 | INFO     | mean x: 1749141156.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,646 | INFO     | mean y: 2430373.009174312
[2025-06-05 13:28:06] 2025-06-05 17:27:50,646 | INFO     | -- intersect: -36316292126.97414
[2025-06-05 13:28:06] 2025-06-05 17:27:50,646 | INFO     | intersect: -36316292126.97414
[2025-06-05 13:28:06] 2025-06-05 17:27:50,647 | INFO     | chi2: 2.2374684099360174
[2025-06-05 13:28:06] 2025-06-05 17:27:50,647 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,648 | INFO     | sum of deviations: 14833375581.5
[2025-06-05 13:28:06] 2025-06-05 17:27:50,648 | INFO     | mean x: 1749141003.5
[2025-06-05 13:28:06] 2025-06-05 17:27:50,648 | INFO     | mean y: 2448382.778846154
[2025-06-05 13:28:06] 2025-06-05 17:27:50,648 | INFO     | -- intersect: -74389601657.62267
[2025-06-05 13:28:06] 2025-06-05 17:27:50,648 | INFO     | intersect: -74389601657.62267
[2025-06-05 13:28:06] 2025-06-05 17:27:50,649 | INFO     | chi2: 1.4720405875031757
[2025-06-05 13:28:06] 2025-06-05 17:27:50,649 | INFO     | current chi2=1.4720405875031757 (change=34.20954767601523 %)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,649 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,650 | INFO     | sum of deviations: 14088398594.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,650 | INFO     | mean x: 1749140851.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,650 | INFO     | mean y: 2446013.898989899
[2025-06-05 13:28:06] 2025-06-05 17:27:50,650 | INFO     | -- intersect: -81909401005.02257
[2025-06-05 13:28:06] 2025-06-05 17:27:50,650 | INFO     | intersect: -81909401005.02257
[2025-06-05 13:28:06] 2025-06-05 17:27:50,650 | INFO     | chi2: 1.4748904557898956
[2025-06-05 13:28:06] 2025-06-05 17:27:50,651 | INFO     | current chi2=1.4748904557898956 (change=-0.1935998443870224 %)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,651 | INFO     | right removable region: 98
[2025-06-05 13:28:06] 2025-06-05 17:27:50,651 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,651 | INFO     | sum of deviations: -6969152918.5
[2025-06-05 13:28:06] 2025-06-05 17:27:50,651 | INFO     | mean x: 1749141308.5
[2025-06-05 13:28:06] 2025-06-05 17:27:50,652 | INFO     | mean y: 2473591.6634615385
[2025-06-05 13:28:06] 2025-06-05 17:27:50,652 | INFO     | -- intersect: 34954036720.80008
[2025-06-05 13:28:06] 2025-06-05 17:27:50,652 | INFO     | intersect: 34954036720.80008
[2025-06-05 13:28:06] 2025-06-05 17:27:50,652 | INFO     | chi2: 0.829348631684446
[2025-06-05 13:28:06] 2025-06-05 17:27:50,652 | INFO     | current chi2=0.829348631684446 (change=62.93361604563784 %)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,652 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,653 | INFO     | sum of deviations: -4994910397.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,653 | INFO     | mean x: 1749141461.0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,653 | INFO     | mean y: 2467291.717171717
[2025-06-05 13:28:06] 2025-06-05 17:27:50,653 | INFO     | -- intersect: 29043559241.792336
[2025-06-05 13:28:06] 2025-06-05 17:27:50,653 | INFO     | intersect: 29043559241.792336
[2025-06-05 13:28:06] 2025-06-05 17:27:50,654 | INFO     | chi2: 0.8059245945953313
[2025-06-05 13:28:06] 2025-06-05 17:27:50,654 | INFO     | current chi2=0.8059245945953313 (change=2.8243896709082827 %)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,654 | INFO     | left removable region: 20
[2025-06-05 13:28:06] 2025-06-05 17:27:50,654 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 13:28:06] 2025-06-05 17:27:50,654 | INFO     | sum of deviations: 748027353.5
[2025-06-05 13:28:06] 2025-06-05 17:27:50,654 | INFO     | mean x: 1749141430.5
[2025-06-05 13:28:06] 2025-06-05 17:27:50,655 | INFO     | mean y: 2491627.4743589745
[2025-06-05 13:28:06] 2025-06-05 17:27:50,655 | INFO     | -- intersect: -8890575341.847904
[2025-06-05 13:28:06] 2025-06-05 17:27:50,655 | INFO     | intersect: -8890575341.847904
[2025-06-05 13:28:06] 2025-06-05 17:27:50,655 | INFO     | chi2: 7.500185708002042e-05
[2025-06-05 13:28:06] 2025-06-05 17:27:50,655 | INFO     | -- intersect: -8890575341.847904
[2025-06-05 13:28:06] 2025-06-05 17:27:50,655 | INFO     | current memory leak: 5.08 B/s (using 78 data points, chi2=0.00)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,656 | INFO     | could have reported an average CPU frequency of 2090 MHz (7 samples)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,656 | INFO     | ..............................
[2025-06-05 13:28:06] 2025-06-05 17:27:50,656 | INFO     | . Timing measurements:
[2025-06-05 13:28:06] 2025-06-05 17:27:50,656 | INFO     | . get job = 0 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,656 | INFO     | . initial setup = 2 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,656 | INFO     | . payload setup = 11 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,657 | INFO     | . stage-in = 0 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,657 | INFO     | . payload execution = 6600 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,657 | INFO     | . stage-out = 0 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,657 | INFO     | . log creation = 0 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,657 | INFO     | ..............................
[2025-06-05 13:28:06] 2025-06-05 17:27:50,749 | INFO     | 
[2025-06-05 13:28:06] 2025-06-05 17:27:50,749 | INFO     | job summary report
[2025-06-05 13:28:06] 2025-06-05 17:27:50,750 | INFO     | --------------------------------------------------
[2025-06-05 13:28:06] 2025-06-05 17:27:50,750 | INFO     | PanDA job id: 6680888686
[2025-06-05 13:28:06] 2025-06-05 17:27:50,750 | INFO     | task id: 45006595
[2025-06-05 13:28:06] 2025-06-05 17:27:50,750 | INFO     | errors: (none)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:28:06] 2025-06-05 17:27:50,751 | INFO     | pilot state: finished 
[2025-06-05 13:28:06] 2025-06-05 17:27:50,751 | INFO     | transexitcode: 0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,751 | INFO     | exeerrorcode: 0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,751 | INFO     | exeerrordiag: 
[2025-06-05 13:28:06] 2025-06-05 17:27:50,751 | INFO     | exitcode: 0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,751 | INFO     | exitmsg: OK
[2025-06-05 13:28:06] 2025-06-05 17:27:50,752 | INFO     | cpuconsumptiontime: 47258 s
[2025-06-05 13:28:06] 2025-06-05 17:27:50,752 | INFO     | nevents: 400
[2025-06-05 13:28:06] 2025-06-05 17:27:50,752 | INFO     | neventsw: 0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,752 | INFO     | pid: 4724
[2025-06-05 13:28:06] 2025-06-05 17:27:50,752 | INFO     | pgrp: 4724
[2025-06-05 13:28:06] 2025-06-05 17:27:50,752 | INFO     | corecount: 8
[2025-06-05 13:28:06] 2025-06-05 17:27:50,753 | INFO     | event service: False
[2025-06-05 13:28:06] 2025-06-05 17:27:50,753 | INFO     | sizes: {0: 2397632, 6: 2397894, 11: 2397922, 6615: 2425033, 6617: 2433974, 6619: 2434030, 6625: 2434352}
[2025-06-05 13:28:06] 2025-06-05 17:27:50,753 | INFO     | --------------------------------------------------
[2025-06-05 13:28:06] 2025-06-05 17:27:50,753 | INFO     | 
[2025-06-05 13:28:06] 2025-06-05 17:27:50,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 13:28:06] 2025-06-05 17:27:50,784 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,784 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,784 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,784 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:28:06] 2025-06-05 17:27:50,787 | INFO     | job 6680888686 has completed (purged errors)
[2025-06-05 13:28:06] 2025-06-05 17:27:50,788 | INFO     | overall cleanup function is called
[2025-06-05 13:28:06] 2025-06-05 17:27:51,694 | INFO     | PID=30594 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 13:28:06] 2025-06-05 17:27:51,793 | INFO     | --- collectZombieJob: --- 10, [4724]
[2025-06-05 13:28:06] 2025-06-05 17:27:51,794 | INFO     | zombie collector waiting for pid 4724
[2025-06-05 13:28:06] 2025-06-05 17:27:51,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:28:06] 2025-06-05 17:27:51,794 | INFO     | collected zombie processes
[2025-06-05 13:28:06] 2025-06-05 17:27:51,794 | INFO     | will attempt to kill all subprocesses of pid=4724
[2025-06-05 13:28:06] 2025-06-05 17:27:51,875 | INFO     | process IDs to be killed: [4724] (in reverse order)
[2025-06-05 13:28:06] 2025-06-05 17:27:51,939 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:28:06] 2025-06-05 17:27:51,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:28:06] 2025-06-05 17:27:51,944 | INFO     | did not find any defunct processes belonging to 4724
[2025-06-05 13:28:06] 2025-06-05 17:27:51,948 | INFO     | did not find any defunct processes belonging to 4724
[2025-06-05 13:28:06] 2025-06-05 17:27:51,948 | INFO     | ready for new job
[2025-06-05 13:28:06] 2025-06-05 17:27:51,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:28:06] 2025-06-05 17:27:51,950 | INFO     | ***************************************
[2025-06-05 13:28:06] 2025-06-05 17:27:51,950 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 13:28:06] 2025-06-05 17:27:51,950 | INFO     | ***************************************
[2025-06-05 13:28:06] 2025-06-05 17:27:51,950 | INFO     | 
[2025-06-05 13:28:06] 2025-06-05 17:27:51,951 | INFO     | architecture information:
[2025-06-05 13:28:06] 2025-06-05 17:27:51,951 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:28:06] 2025-06-05 17:27:51,970 | INFO     | cat /etc/os-release:
[2025-06-05 13:28:06] NAME="CentOS Linux"
[2025-06-05 13:28:06] VERSION="7 (Core)"
[2025-06-05 13:28:06] ID="centos"
[2025-06-05 13:28:06] ID_LIKE="rhel fedora"
[2025-06-05 13:28:06] VERSION_ID="7"
[2025-06-05 13:28:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:28:06] ANSI_COLOR="0;31"
[2025-06-05 13:28:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:28:06] HOME_URL="https://www.centos.org/"
[2025-06-05 13:28:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:28:06] 
[2025-06-05 13:28:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:28:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:28:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:28:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:28:06] 
[2025-06-05 13:28:06] 2025-06-05 17:27:51,970 | INFO     | ***************************************
[2025-06-05 13:28:06] 2025-06-05 17:27:52,473 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 13:28:06] 2025-06-05 17:27:52,493 | INFO     | sufficient remaining disk space (18634244096 B)
[2025-06-05 13:28:06] 2025-06-05 17:27:52,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:28:06] 2025-06-05 17:27:52,494 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:28:06] 2025-06-05 17:27:52,494 | INFO     | update_server=False
[2025-06-05 13:28:06] 2025-06-05 17:27:52,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:28:06] 2025-06-05 17:27:52,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:28:06] 2025-06-05 17:27:52,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:28:06] 2025-06-05 17:27:52,495 | INFO     | aborting loop
[2025-06-05 13:28:06] 2025-06-05 17:27:52,495 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:28:06] 2025-06-05 17:27:52,496 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:28:06] 2025-06-05 17:27:52,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:28:06] 2025-06-05 17:27:52,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:28:06] 2025-06-05 17:27:52,859 | INFO     | all job control threads have been joined
[2025-06-05 13:28:06] 2025-06-05 17:27:53,021 | INFO     | all data control threads have been joined
[2025-06-05 13:28:06] 2025-06-05 17:27:53,144 | INFO     | all payload control threads have been joined
[2025-06-05 13:28:06] 2025-06-05 17:27:53,500 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:53,500 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:53,501 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:53,578 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:53,638 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:53,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:28:06] 2025-06-05 17:27:53,803 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:53,864 | INFO     | [job] control thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:54,014 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:54,026 | INFO     | [data] control thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:54,149 | INFO     | [payload] control thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:54,479 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:54,568 | INFO     | [job] validate thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:54,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:55,086 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:55,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:28:06] 2025-06-05 17:27:55,709 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:27:59,221 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:28:06] 2025-06-05 17:28:00,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823837947712)>', '<ExcThread(monitor, started 139822500923136)>']
[2025-06-05 13:28:06] 2025-06-05 17:28:01,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:28:06] 2025-06-05 17:28:01,532 | INFO     | [monitor] control thread has ended
[2025-06-05 13:28:06] 2025-06-05 17:28:05,860 | INFO     | all workflow threads have been joined
[2025-06-05 13:28:06] 2025-06-05 17:28:05,861 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:28:06] 2025-06-05 17:28:05,861 | INFO     | traces error code: 0
[2025-06-05 13:28:06] 2025-06-05 17:28:05,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:28:06] 2025-06-05 17:28:05,967 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:28:06] 2025-06-05 17:28:05,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:28:06] 2025-06-05 17:28:05,976 [wrapper] pilotpid: 30594
[2025-06-05 13:28:06] 2025-06-05 17:28:05,981 [wrapper] Pilot exit status: 0
[2025-06-05 13:28:06] 2025-06-05 17:28:05,999 [wrapper] pandaids: 6680888686
[2025-06-05 13:28:06] 2025-06-05 17:28:06,041 [wrapper] cleanup supervisor_pilot  4910 30595
[2025-06-05 13:28:06] 2025-06-05 17:28:06,046 [wrapper] Test setup, not cleaning
[2025-06-05 13:28:06] 2025-06-05 17:28:06,051 [wrapper] apfmon messages muted
[2025-06-05 13:28:06] 2025-06-05 17:28:06,055 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:28:06] 2025-06-05 17:28:06,060 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:28:06]  *** Error codes and diagnostics ***
[2025-06-05 13:28:06]     "exeErrorCode": 0,
[2025-06-05 13:28:06]     "exeErrorDiag": "",
[2025-06-05 13:28:06]     "pilotErrorCode": 0,
[2025-06-05 13:28:06]     "pilotErrorDiag": "",
[2025-06-05 13:28:06]  *** Listing of results directory ***
[2025-06-05 13:28:06] total 398432
[2025-06-05 13:28:06] -rwx------ 1 boincer umatlas     37140 Jun  5 11:36 runpilot2-wrapper.sh
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas      5112 Jun  5 11:36 queuedata.json
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas    529402 Jun  5 11:36 pilot3.tar.gz
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas       100 Jun  5 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:28:06] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 11:36 run_atlas
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas       105 Jun  5 11:36 job.xml
[2025-06-05 13:28:06] -rw-r--r-- 2 boincer umatlas 217010572 Jun  5 11:36 EVNT.45006593._001853.pool.root.1
[2025-06-05 13:28:06] -rw-r--r-- 2 boincer umatlas     15095 Jun  5 11:36 start_atlas.sh
[2025-06-05 13:28:06] drwxrwx--x 2 boincer umatlas      4096 Jun  5 11:36 shared
[2025-06-05 13:28:06] -rw-r--r-- 2 boincer umatlas    541912 Jun  5 11:36 input.tar.gz
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas         0 Jun  5 11:36 boinc_lockfile
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas      2524 Jun  5 11:36 pandaJob.out
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas    983229 Jun  5 11:37 agis_schedconf.cvmfs.json
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas   1598969 Jun  5 11:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:28:06] drwx------ 4 boincer umatlas      4096 Jun  5 11:37 pilot3
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas      5823 Jun  5 13:21 init_data.xml
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas 185183816 Jun  5 13:27 HITS.45006595._057101.pool.root.1
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas       529 Jun  5 13:27 boinc_task_state.xml
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas        95 Jun  5 13:27 pilot_heartbeat.json
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas      1047 Jun  5 13:27 memory_monitor_summary.json
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas    335866 Jun  5 13:27 log.45006595._057101.job.log.tgz.1
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 13:27 boinc_mmap_file
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas        27 Jun  5 13:27 wrapper_checkpoint.txt
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas      7769 Jun  5 13:27 heartbeat.json
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas      4480 Jun  5 13:28 pilotlog.txt
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas    615155 Jun  5 13:28 log.45006595._057101.job.log.1
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas       357 Jun  5 13:28 output.list
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas       620 Jun  5 13:28 runtime_log
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas    972800 Jun  5 13:28 result.tar.gz
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas       659 Jun  5 13:28 zqXMDmhoRh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms5nKDmiqFZFn.diag
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas      8655 Jun  5 13:28 runtime_log.err
[2025-06-05 13:28:06] -rw-r--r-- 1 boincer umatlas     20879 Jun  5 13:28 stderr.txt
[2025-06-05 13:28:06] HITS file was successfully produced:
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas 185183816 Jun  5 13:27 shared/HITS.pool.root.1
[2025-06-05 13:28:06]  *** Contents of shared directory: ***
[2025-06-05 13:28:06] total 394276
[2025-06-05 13:28:06] -rw-r--r-- 2 boincer umatlas 217010572 Jun  5 11:36 ATLAS.root_0
[2025-06-05 13:28:06] -rw-r--r-- 2 boincer umatlas     15095 Jun  5 11:36 start_atlas.sh
[2025-06-05 13:28:06] -rw-r--r-- 2 boincer umatlas    541912 Jun  5 11:36 input.tar.gz
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas 185183816 Jun  5 13:27 HITS.pool.root.1
[2025-06-05 13:28:06] -rw------- 1 boincer umatlas    972800 Jun  5 13:28 result.tar.gz
13:28:07 (26815): run_atlas exited; CPU time 47225.760449
13:28:07 (26815): called boinc_finish(0)

</stderr_txt>
]]>

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