Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:29:26 (482267): wrapper (7.7.26015): starting
11:29:26 (482267): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 11:29:26] Arguments: --nthreads 10
[2025-06-05 11:29:26] Threads: 10
[2025-06-05 11:29:26] Checking for CVMFS
[2025-06-05 11:29:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:29:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:29:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:29:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:29:27] 2.12.6.0 4820 2959 166944 146824 0 185 24619557 32935936 21988 16776704 0 11862879 99.615 12328414 32704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 11:29:27] CVMFS is ok
[2025-06-05 11:29:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:29:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:29:27] Further information can be found at the LHC@home message board.
[2025-06-05 11:29:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:29:27] Checking for apptainer binary...
[2025-06-05 11:29:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:29:27] Running /usr/bin/apptainer --version
[2025-06-05 11:29:27] apptainer version 1.4.1-1.el9
[2025-06-05 11:29:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:29:28] c-8-32.aglt2.org
[2025-06-05 11:29:28] apptainer works
[2025-06-05 11:29:28] Set ATHENA_PROC_NUMBER=10
[2025-06-05 11:29:28] Set ATHENA_CORE_NUMBER=10
[2025-06-05 11:29:28] Starting ATLAS job with PandaID=6669135851
[2025-06-05 11:29:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:21:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:21:03] 2025-06-05 19:20:48,632 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669135851/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,633 | INFO     | extracted standard info from prmon json
[2025-06-05 15:21:03] 2025-06-05 19:20:48,633 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:21:03] 2025-06-05 19:20:48,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:21:03] 2025-06-05 19:20:48,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:21:03] 2025-06-05 19:20:48,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:21:03] 2025-06-05 19:20:48,639 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:21:03] 2025-06-05 19:20:48,639 | INFO     | sum of square deviations: 3627016982.9867897
[2025-06-05 15:21:03] 2025-06-05 19:20:48,641 | INFO     | sum of deviations: 37569263928.995575
[2025-06-05 15:21:03] 2025-06-05 19:20:48,641 | INFO     | mean x: 1749144330.2202644
[2025-06-05 15:21:03] 2025-06-05 19:20:48,642 | INFO     | mean y: 2206020.7400881057
[2025-06-05 15:21:03] 2025-06-05 19:20:48,642 | INFO     | -- intersect: -18115730923.08884
[2025-06-05 15:21:03] 2025-06-05 19:20:48,642 | INFO     | intersect: -18115730923.08884
[2025-06-05 15:21:03] 2025-06-05 19:20:48,642 | INFO     | chi2: 2.453328172972326
[2025-06-05 15:21:03] 2025-06-05 19:20:48,643 | INFO     | sum of square deviations: 3392599930.2387333
[2025-06-05 15:21:03] 2025-06-05 19:20:48,644 | INFO     | sum of deviations: 50471267105.21172
[2025-06-05 15:21:03] 2025-06-05 19:20:48,644 | INFO     | mean x: 1749144177.7252252
[2025-06-05 15:21:03] 2025-06-05 19:20:48,645 | INFO     | mean y: 2214260.2657657657
[2025-06-05 15:21:03] 2025-06-05 19:20:48,645 | INFO     | -- intersect: -26019575757.658188
[2025-06-05 15:21:03] 2025-06-05 19:20:48,645 | INFO     | intersect: -26019575757.658188
[2025-06-05 15:21:03] 2025-06-05 19:20:48,645 | INFO     | chi2: 1.7759152641892646
[2025-06-05 15:21:03] 2025-06-05 19:20:48,645 | INFO     | current chi2=1.7759152641892646 (change=27.61199729599742 %)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,646 | INFO     | sum of square deviations: 3168468022.820285
[2025-06-05 15:21:03] 2025-06-05 19:20:48,647 | INFO     | sum of deviations: 49086900963.47006
[2025-06-05 15:21:03] 2025-06-05 19:20:48,648 | INFO     | mean x: 1749144025.21659
[2025-06-05 15:21:03] 2025-06-05 19:20:48,648 | INFO     | mean y: 2213319.202764977
[2025-06-05 15:21:03] 2025-06-05 19:20:48,648 | INFO     | -- intersect: -27096074849.799248
[2025-06-05 15:21:03] 2025-06-05 19:20:48,648 | INFO     | intersect: -27096074849.799248
[2025-06-05 15:21:03] 2025-06-05 19:20:48,648 | INFO     | chi2: 1.7756033463933572
[2025-06-05 15:21:03] 2025-06-05 19:20:48,649 | INFO     | current chi2=1.7756033463933572 (change=0.017563776954743485 %)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,649 | INFO     | right removable region: 216
[2025-06-05 15:21:03] 2025-06-05 19:20:48,649 | INFO     | sum of square deviations: 3392569430.2387333
[2025-06-05 15:21:03] 2025-06-05 19:20:48,650 | INFO     | sum of deviations: 1454083796.4684658
[2025-06-05 15:21:03] 2025-06-05 19:20:48,651 | INFO     | mean x: 1749144482.7252252
[2025-06-05 15:21:03] 2025-06-05 19:20:48,651 | INFO     | mean y: 2229353.6306306305
[2025-06-05 15:21:03] 2025-06-05 19:20:48,651 | INFO     | -- intersect: -747468685.6616672
[2025-06-05 15:21:03] 2025-06-05 19:20:48,651 | INFO     | intersect: -747468685.6616672
[2025-06-05 15:21:03] 2025-06-05 19:20:48,651 | INFO     | chi2: 0.9040537340839243
[2025-06-05 15:21:03] 2025-06-05 19:20:48,652 | INFO     | current chi2=0.9040537340839243 (change=63.149906154274525 %)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,652 | INFO     | sum of square deviations: 3168461193.9355035
[2025-06-05 15:21:03] 2025-06-05 19:20:48,654 | INFO     | sum of deviations: 1038195609.161293
[2025-06-05 15:21:03] 2025-06-05 19:20:48,654 | INFO     | mean x: 1749144635.2258065
[2025-06-05 15:21:03] 2025-06-05 19:20:48,654 | INFO     | mean y: 2229573.5069124424
[2025-06-05 15:21:03] 2025-06-05 19:20:48,654 | INFO     | -- intersect: -570904881.6523414
[2025-06-05 15:21:03] 2025-06-05 19:20:48,654 | INFO     | intersect: -570904881.6523414
[2025-06-05 15:21:03] 2025-06-05 19:20:48,655 | INFO     | chi2: 0.8424042212700448
[2025-06-05 15:21:03] 2025-06-05 19:20:48,655 | INFO     | current chi2=0.8424042212700448 (change=6.819231035680512 %)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,655 | INFO     | left removable region: 20
[2025-06-05 15:21:03] 2025-06-05 19:20:48,655 | INFO     | sum of square deviations: 2334727093.566327
[2025-06-05 15:21:03] 2025-06-05 19:20:48,656 | INFO     | sum of deviations: 17100811944.816334
[2025-06-05 15:21:03] 2025-06-05 19:20:48,656 | INFO     | mean x: 1749144604.7193878
[2025-06-05 15:21:03] 2025-06-05 19:20:48,657 | INFO     | mean y: 2234930.4693877553
[2025-06-05 15:21:03] 2025-06-05 19:20:48,657 | INFO     | -- intersect: -12809452153.653873
[2025-06-05 15:21:03] 2025-06-05 19:20:48,657 | INFO     | intersect: -12809452153.653873
[2025-06-05 15:21:03] 2025-06-05 19:20:48,657 | INFO     | chi2: 0.059554448823046856
[2025-06-05 15:21:03] 2025-06-05 19:20:48,657 | INFO     | -- intersect: -12809452153.653873
[2025-06-05 15:21:03] 2025-06-05 19:20:48,657 | INFO     | current memory leak: 7.32 B/s (using 196 data points, chi2=0.06)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,658 | INFO     | ..............................
[2025-06-05 15:21:03] 2025-06-05 19:20:48,658 | INFO     | . Timing measurements:
[2025-06-05 15:21:03] 2025-06-05 19:20:48,658 | INFO     | . get job = 0 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,658 | INFO     | . initial setup = 4 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,658 | INFO     | . payload setup = 12 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,659 | INFO     | . stage-in = 0 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,659 | INFO     | . payload execution = 13808 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,659 | INFO     | . stage-out = 2 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,659 | INFO     | . log creation = 0 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,659 | INFO     | ..............................
[2025-06-05 15:21:03] 2025-06-05 19:20:48,765 | INFO     | 
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | job summary report
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | --------------------------------------------------
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | PanDA job id: 6669135851
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | task id: 44871837
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | errors: (none)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | pilot state: finished 
[2025-06-05 15:21:03] 2025-06-05 19:20:48,766 | INFO     | transexitcode: 0
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | exeerrorcode: 0
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | exeerrordiag: 
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | exitcode: 0
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | exitmsg: OK
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | cpuconsumptiontime: 60238 s
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | nevents: 400
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | neventsw: 0
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | pid: 493129
[2025-06-05 15:21:03] 2025-06-05 19:20:48,767 | INFO     | pgrp: 493129
[2025-06-05 15:21:03] 2025-06-05 19:20:48,768 | INFO     | corecount: 10
[2025-06-05 15:21:03] 2025-06-05 19:20:48,768 | INFO     | event service: False
[2025-06-05 15:21:03] 2025-06-05 19:20:48,768 | INFO     | sizes: {0: 2397165, 1: 2397249, 2: 2397420, 3: 2397448, 12: 2397682, 13: 2397710, 13824: 2427872, 13829: 2436813, 13832: 2436869, 13837: 2437039}
[2025-06-05 15:21:03] 2025-06-05 19:20:48,768 | INFO     | --------------------------------------------------
[2025-06-05 15:21:03] 2025-06-05 19:20:48,768 | INFO     | 
[2025-06-05 15:21:03] 2025-06-05 19:20:48,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:21:03] 2025-06-05 19:20:48,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,795 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:21:03] 2025-06-05 19:20:48,795 | INFO     | job 6669135851 has completed (purged errors)
[2025-06-05 15:21:03] 2025-06-05 19:20:48,795 | INFO     | overall cleanup function is called
[2025-06-05 15:21:03] 2025-06-05 19:20:49,804 | INFO     | --- collectZombieJob: --- 10, [493129]
[2025-06-05 15:21:03] 2025-06-05 19:20:49,804 | INFO     | zombie collector waiting for pid 493129
[2025-06-05 15:21:03] 2025-06-05 19:20:49,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:21:03] 2025-06-05 19:20:49,805 | INFO     | collected zombie processes
[2025-06-05 15:21:03] 2025-06-05 19:20:49,805 | INFO     | will attempt to kill all subprocesses of pid=493129
[2025-06-05 15:21:03] 2025-06-05 19:20:50,257 | INFO     | process IDs to be killed: [493129] (in reverse order)
[2025-06-05 15:21:03] 2025-06-05 19:20:50,401 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:21:03] 2025-06-05 19:20:50,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:21:03] 2025-06-05 19:20:50,419 | INFO     | did not find any defunct processes belonging to 493129
[2025-06-05 15:21:03] 2025-06-05 19:20:50,435 | INFO     | did not find any defunct processes belonging to 493129
[2025-06-05 15:21:03] 2025-06-05 19:20:50,436 | INFO     | ready for new job
[2025-06-05 15:21:03] 2025-06-05 19:20:50,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:21:03] 2025-06-05 19:20:50,438 | INFO     | **************************************
[2025-06-05 15:21:03] 2025-06-05 19:20:50,438 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:21:03] 2025-06-05 19:20:50,438 | INFO     | **************************************
[2025-06-05 15:21:03] 2025-06-05 19:20:50,438 | INFO     | 
[2025-06-05 15:21:03] 2025-06-05 19:20:50,440 | INFO     | architecture information:
[2025-06-05 15:21:03] 2025-06-05 19:20:50,441 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:21:03] 2025-06-05 19:20:50,456 | INFO     | cat /etc/os-release:
[2025-06-05 15:21:03] NAME="CentOS Linux"
[2025-06-05 15:21:03] VERSION="7 (Core)"
[2025-06-05 15:21:03] ID="centos"
[2025-06-05 15:21:03] ID_LIKE="rhel fedora"
[2025-06-05 15:21:03] VERSION_ID="7"
[2025-06-05 15:21:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:21:03] ANSI_COLOR="0;31"
[2025-06-05 15:21:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:21:03] HOME_URL="https://www.centos.org/"
[2025-06-05 15:21:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:21:03] 
[2025-06-05 15:21:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:21:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:21:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:21:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:21:03] 
[2025-06-05 15:21:03] 2025-06-05 19:20:50,456 | INFO     | **************************************
[2025-06-05 15:21:03] 2025-06-05 19:20:50,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:21:03] 2025-06-05 19:20:50,975 | INFO     | sufficient remaining disk space (76564922368 B)
[2025-06-05 15:21:03] 2025-06-05 19:20:50,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:21:03] 2025-06-05 19:20:50,976 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:21:03] 2025-06-05 19:20:50,976 | INFO     | update_server=False
[2025-06-05 15:21:03] 2025-06-05 19:20:50,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:21:03] 2025-06-05 19:20:50,976 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:21:03] 2025-06-05 19:20:50,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:21:03] 2025-06-05 19:20:50,977 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:21:03] 2025-06-05 19:20:50,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:21:03] 2025-06-05 19:20:50,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:21:03] 2025-06-05 19:20:50,977 | INFO     | aborting loop
[2025-06-05 15:21:03] 2025-06-05 19:20:51,274 | INFO     | all data control threads have been joined
[2025-06-05 15:21:03] 2025-06-05 19:20:51,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:21:03] 2025-06-05 19:20:51,909 | INFO     | all job control threads have been joined
[2025-06-05 15:21:03] 2025-06-05 19:20:51,981 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:51,982 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:52,109 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:52,171 | INFO     | all payload control threads have been joined
[2025-06-05 15:21:03] 2025-06-05 19:20:52,283 | INFO     | [data] control thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:52,453 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:52,663 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:52,664 | INFO     | [job] validate thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:52,862 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:52,915 | INFO     | [job] control thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:53,177 | INFO     | [payload] control thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:53,238 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:53,388 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:53,475 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:53,534 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:53,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:21:03] 2025-06-05 19:20:54,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:21:03] 2025-06-05 19:20:54,781 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:58,408 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:21:03] 2025-06-05 19:20:58,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002287425344)>', '<ExcThread(monitor, started 140001933240064)>']
[2025-06-05 15:21:03] 2025-06-05 19:20:59,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:21:03] 2025-06-05 19:20:59,021 | INFO     | [monitor] control thread has ended
[2025-06-05 15:21:03] 2025-06-05 19:21:03,521 | INFO     | all workflow threads have been joined
[2025-06-05 15:21:03] 2025-06-05 19:21:03,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:21:03] 2025-06-05 19:21:03,522 | INFO     | traces error code: 0
[2025-06-05 15:21:03] 2025-06-05 19:21:03,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:21:03] 2025-06-05 19:21:03,661 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:21:03] 2025-06-05 19:21:03,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:21:03] 2025-06-05 19:21:03,666 [wrapper] pilotpid: 485832
[2025-06-05 15:21:03] 2025-06-05 19:21:03,668 [wrapper] Pilot exit status: 0
[2025-06-05 15:21:03] 2025-06-05 19:21:03,678 [wrapper] pandaids: 6669135851
[2025-06-05 15:21:03] 2025-06-05 19:21:03,760 [wrapper] cleanup supervisor_pilot 1486524 485833
[2025-06-05 15:21:03] 2025-06-05 19:21:03,764 [wrapper] Test setup, not cleaning
[2025-06-05 15:21:03] 2025-06-05 19:21:03,767 [wrapper] apfmon messages muted
[2025-06-05 15:21:03] 2025-06-05 19:21:03,770 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:21:03] 2025-06-05 19:21:03,773 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:21:03]  *** Error codes and diagnostics ***
[2025-06-05 15:21:03]     "exeErrorCode": 0,
[2025-06-05 15:21:03]     "exeErrorDiag": "",
[2025-06-05 15:21:03]     "pilotErrorCode": 0,
[2025-06-05 15:21:03]     "pilotErrorDiag": "",
[2025-06-05 15:21:03]  *** Listing of results directory ***
[2025-06-05 15:21:03] total 412060
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas      5111 May 28 23:08 queuedata.json
[2025-06-05 15:21:03] -rwx------. 1 boincer umatlas     37140 May 28 23:09 runpilot2-wrapper.sh
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas    495897 May 28 23:09 pilot3.tar.gz
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas       100 Jun  5 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:21:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 11:29 run_atlas
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas       105 Jun  5 11:29 job.xml
[2025-06-05 15:21:03] -rw-r--r--. 2 boincer umatlas 221803955 Jun  5 11:29 EVNT.44871834._003659.pool.root.1
[2025-06-05 15:21:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:29 start_atlas.sh
[2025-06-05 15:21:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 11:29 shared
[2025-06-05 15:21:03] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 11:29 input.tar.gz
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas         0 Jun  5 11:29 boinc_lockfile
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 11:29 pandaJob.out
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas    983229 Jun  5 11:29 agis_schedconf.cvmfs.json
[2025-06-05 15:21:03] drwx------. 4 boincer umatlas      4096 Jun  5 11:29 pilot3
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas      6708 Jun  5 15:11 init_data.xml
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas       531 Jun  5 15:19 boinc_task_state.xml
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas 193156301 Jun  5 15:19 HITS.44871837._094131.pool.root.1
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas        95 Jun  5 15:20 pilot_heartbeat.json
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas      1045 Jun  5 15:20 memory_monitor_summary.json
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas   1598969 Jun  5 15:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas    429257 Jun  5 15:20 log.44871837._094131.job.log.tgz.1
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas      7726 Jun  5 15:20 heartbeat.json
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 15:20 boinc_mmap_file
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas        28 Jun  5 15:20 wrapper_checkpoint.txt
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas      4476 Jun  5 15:21 pilotlog.txt
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas   1150056 Jun  5 15:21 log.44871837._094131.job.log.1
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas       357 Jun  5 15:21 output.list
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas       620 Jun  5 15:21 runtime_log
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas   1597440 Jun  5 15:21 result.tar.gz
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas      8652 Jun  5 15:21 runtime_log.err
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas       655 Jun  5 15:21 g4INDmQpie7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAXUKDmffO5Io.diag
[2025-06-05 15:21:03] -rw-r--r--. 1 boincer umatlas     20978 Jun  5 15:21 stderr.txt
[2025-06-05 15:21:03] HITS file was successfully produced:
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas 193156301 Jun  5 15:19 shared/HITS.pool.root.1
[2025-06-05 15:21:03]  *** Contents of shared directory: ***
[2025-06-05 15:21:03] total 407324
[2025-06-05 15:21:03] -rw-r--r--. 2 boincer umatlas 221803955 Jun  5 11:29 ATLAS.root_0
[2025-06-05 15:21:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:29 start_atlas.sh
[2025-06-05 15:21:03] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 11:29 input.tar.gz
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas 193156301 Jun  5 15:19 HITS.pool.root.1
[2025-06-05 15:21:03] -rw-------. 1 boincer umatlas   1597440 Jun  5 15:21 result.tar.gz
15:21:05 (482267): run_atlas exited; CPU time 60667.108756
15:21:05 (482267): called boinc_finish(0)

</stderr_txt>
]]>

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