Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 10:35:22 (7324): Detected: vboxwrapper 26206
2025-06-06 10:35:22 (7324): Detected: BOINC client v7.16.5
2025-06-06 10:35:23 (7324): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-06-06 10:35:23 (7324): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 10:35:24 (7324): Create VM. (boinc_5795c7fe39a0ecdc, slot#5)
2025-06-06 10:35:24 (7324): Setting Memory Size for VM. (4400MB)
2025-06-06 10:35:24 (7324): Setting CPU Count for VM. (4)
2025-06-06 10:35:25 (7324): Setting Chipset Options for VM.
2025-06-06 10:35:25 (7324): Setting Graphics Controller Options for VM.
2025-06-06 10:35:25 (7324): Setting Boot Options for VM.
2025-06-06 10:35:25 (7324): Setting Network Configuration for NAT.
2025-06-06 10:35:26 (7324): Enabling VM Network Access.
2025-06-06 10:35:26 (7324): Disabling USB Support for VM.
2025-06-06 10:35:26 (7324): Disabling COM Port Support for VM.
2025-06-06 10:35:26 (7324): Disabling LPT Port Support for VM.
2025-06-06 10:35:27 (7324): Disabling Audio Support for VM.
2025-06-06 10:35:27 (7324): Disabling Clipboard Support for VM.
2025-06-06 10:35:27 (7324): Disabling Drag and Drop Support for VM.
2025-06-06 10:35:27 (7324): Adding storage controller(s) to VM.
2025-06-06 10:35:28 (7324): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 10:35:28 (7324): Adding VirtualBox Guest Additions to VM.
2025-06-06 10:35:28 (7324): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 10:35:29 (7324): forwarding host port 62379 to guest port 80
2025-06-06 10:35:29 (7324): Enabling remote desktop for VM.
2025-06-06 10:35:30 (7324): Enabling shared directory for VM.
2025-06-06 10:35:30 (7324): Starting VM using VBoxManage interface. (boinc_5795c7fe39a0ecdc, slot#5)
2025-06-06 10:35:34 (7324): Successfully started VM. (PID = '13128')
2025-06-06 10:35:34 (7324): Reporting VM Process ID to BOINC.
2025-06-06 10:35:34 (7324): Guest Log: BIOS: VirtualBox 5.2.44
2025-06-06 10:35:34 (7324): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 10:35:34 (7324): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 10:35:34 (7324): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 10:35:34 (7324): Detected: Web Application Enabled (http://localhost:62379)
2025-06-06 10:35:34 (7324): Detected: Remote Desktop Enabled (localhost:62380)
2025-06-06 10:35:34 (7324): Preference change detected
2025-06-06 10:35:34 (7324): Setting CPU throttle for VM. (100%)
2025-06-06 10:35:35 (7324): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 10:35:36 (7324): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 10:35:36 (7324): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 10:35:39 (7324): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 10:35:39 (7324): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 10:35:39 (7324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 10:35:43 (7324): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 10:35:43 (7324): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 10:35:50 (7324): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.000175 main     Log opened 2025-06-06T10:35:48.345322000Z
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.000317 main     OS Product: Linux
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.000375 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.000438 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.000480 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.000481 main     Process ID: 1302
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.000482 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 10:35:50 (7324): Guest Log: 00:00:00.001677 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 10:35:50 (7324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 10:35:50 (7324): Guest Log: [INFO] Mounting shared directory
2025-06-06 10:35:50 (7324): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 10:35:52 (7324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 10:35:52 (7324): Guest Log: [INFO] Detected branch: prod
2025-06-06 10:35:52 (7324): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 10:35:52 (7324): Guest Log: Copying input files
2025-06-06 10:35:54 (7324): Guest Log: Copied input files into RunAtlas.
2025-06-06 10:35:54 (7324): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 10:35:54 (7324): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 10:35:54 (7324): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 10:35:54 (7324): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 10:36:00 (7324): Guest Log: 00:00:10.005535 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 324 376 000ns (GuestNow=1 749 195 360 024 131 000 ns GuestLast=1 749 206 148 348 507 000 ns fSetTimeLastLoop=true )
2025-06-06 10:36:03 (7324): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 10:36:03 (7324): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 10:36:03 (7324): Guest Log: 2.6.3.0 1577 0 32172 146847 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 10:36:04 (7324): Guest Log: copied the webapp to /var/www
2025-06-06 10:36:04 (7324): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-06 10:36:04 (7324): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-06 10:36:04 (7324): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 10:36:04 (7324): Guest Log:  *** Starting ATLAS job. (PandaID=6667930982 taskID=44871837) ***
2025-06-06 12:15:38 (7324): Status Report: Elapsed Time: '6000.000000'
2025-06-06 12:15:38 (7324): Status Report: CPU Time: '21975.140625'
2025-06-06 13:55:42 (7324): Status Report: Elapsed Time: '12000.000000'
2025-06-06 13:55:42 (7324): Status Report: CPU Time: '45349.750000'
2025-06-06 15:03:02 (7324): Guest Log:  *** Job finished ***
2025-06-06 15:03:02 (7324): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:02:51,286 | INFO     | [payload] run_realtimelog thread has finished
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:02:51,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:02:55,385 | INFO     | [data] queue_monitor thread has finished
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:02:55,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685712807744)>', '<ExcThread(monitor, started 139685238118144)>']
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:02:55,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:02:55,836 | INFO     | [monitor] control thread has ended
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,459 | INFO     | all workflow threads have been joined
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,459 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,459 | INFO     | traces error code: 0
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,567 [wrapper] ==== pilot stdout END ====
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,572 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,577 [wrapper] pilotpid: 5888
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,582 [wrapper] Pilot exit status: 0
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,642 [wrapper] pandaids: 6667930982
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,670 [wrapper] cleanup supervisor_pilot 14604 5889
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,679 [wrapper] Test setup, not cleaning
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,683 [wrapper] apfmon messages muted
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,690 [wrapper] ==== wrapper stdout END ====
2025-06-06 15:03:02 (7324): Guest Log: 2025-06-06 12:03:00,697 [wrapper] ==== wrapper stderr END ====
2025-06-06 15:03:02 (7324): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 15:03:02 (7324): Guest Log:     "exeErrorCode": 0,
2025-06-06 15:03:02 (7324): Guest Log:     "exeErrorDiag": "",
2025-06-06 15:03:02 (7324): Guest Log:     "pilotErrorCode": 0,
2025-06-06 15:03:02 (7324): Guest Log:     "pilotErrorDiag": "",
2025-06-06 15:03:02 (7324): Guest Log:  *** Listing of results directory ***
2025-06-06 15:03:02 (7324): Guest Log: total 200272
2025-06-06 15:03:02 (7324): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 04:31 pilot3.tar.gz
2025-06-06 15:03:02 (7324): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 04:36 queuedata.json
2025-06-06 15:03:02 (7324): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 04:37 runpilot2-wrapper.sh
2025-06-06 15:03:02 (7324): Guest Log: -rwxr-xr-x. 1 atlas atlas      8878 Jun  6 07:35 init_data.xml
2025-06-06 15:03:02 (7324): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Jun  6 07:35 input.tar.gz
2025-06-06 15:03:02 (7324): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 07:35 start_atlas.sh
2025-06-06 15:03:02 (7324): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 07:35 EVNT.44871834._003076.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 15:03:02 (7324): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  6 07:36 pandaJob.out
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas    987967 Jun  6 07:36 agis_schedconf.cvmfs.json
2025-06-06 15:03:02 (7324): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 07:36 pilot3
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas 197964829 Jun  6 12:02 HITS.44871837._078675.pool.root.1
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas      1046 Jun  6 12:02 memory_monitor_summary.json
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 12:02 agis_ddmendpoints.agis.ALL.json
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas    334542 Jun  6 12:02 log.44871837._078675.job.log.tgz.1
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas      7726 Jun  6 12:02 heartbeat.json
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 12:02 pilot_heartbeat.json
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  6 12:03 pilotlog.txt
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas   1340771 Jun  6 12:03 log.44871837._078675.job.log.1
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 12:03 output.list
2025-06-06 15:03:02 (7324): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 12:03 runtime_log
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas   1689600 Jun  6 12:03 result.tar.gz
2025-06-06 15:03:02 (7324): Guest Log: -rw-r--r--. 1 atlas atlas      8635 Jun  6 12:03 runtime_log.err
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas       671 Jun  6 12:03 dQBLDmPiNe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjuSKDmb9rbHn.diag
2025-06-06 15:03:02 (7324): Guest Log: Looking for outputfile HITS.44871837._078675.pool.root.1
2025-06-06 15:03:02 (7324): Guest Log: HITS file was successfully produced
2025-06-06 15:03:02 (7324): Guest Log: -rw-------. 1 atlas atlas 197964829 Jun  6 12:02 /home/atlas/RunAtlas/HITS.44871837._078675.pool.root.1
2025-06-06 15:03:03 (7324): Guest Log: Successfully finished the ATLAS job!
2025-06-06 15:03:03 (7324): Guest Log: Copying the results back to the shared directory!
2025-06-06 15:03:03 (7324): Guest Log:  *** Contents of shared directory: ***
2025-06-06 15:03:03 (7324): Guest Log: total 412436
2025-06-06 15:03:03 (7324): Guest Log: -rwxrwxrwx. 1 root root 222130878 Jun  6 07:35 ATLAS.root_0
2025-06-06 15:03:03 (7324): Guest Log: -rwxrwxrwx. 1 root root 197964829 Jun  6 12:03 HITS.pool.root.1
2025-06-06 15:03:03 (7324): Guest Log: -rwxrwxrwx. 1 root root      8878 Jun  6 07:35 init_data.xml
2025-06-06 15:03:03 (7324): Guest Log: -rwxrwxrwx. 1 root root    508880 Jun  5 15:18 input.tar.gz
2025-06-06 15:03:03 (7324): Guest Log: -rwxrwxrwx. 1 root root   1689600 Jun  6 12:03 result.tar.gz
2025-06-06 15:03:03 (7324): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  5 15:18 start_atlas.sh
2025-06-06 15:03:03 (7324): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 15:03:03 (7324): VM Completion File Detected.
2025-06-06 15:03:03 (7324): Powering off VM.
2025-06-06 15:03:03 (7324): Successfully stopped VM.
2025-06-06 15:03:03 (7324): Deregistering VM. (boinc_5795c7fe39a0ecdc, slot#5)
2025-06-06 15:03:03 (7324): Removing network bandwidth throttle group from VM.
2025-06-06 15:03:04 (7324): Removing VM from VirtualBox.
15:03:09 (7324): called boinc_finish(0)

</stderr_txt>
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