Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:12:35 (3978410): wrapper (7.7.26015): starting
11:12:35 (3978410): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 11:12:35] Arguments: --nthreads 8
[2025-06-05 11:12:35] Threads: 8
[2025-06-05 11:12:35] Checking for CVMFS
[2025-06-05 11:12:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:12:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:12:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:12:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:12:36] 2.12.6.0 7995 2942 193036 146822 1 526 29006706 32935936 20404 16776704 0 23032949 99.940 2714711 33695 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 11:12:36] CVMFS is ok
[2025-06-05 11:12:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:12:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:12:36] Further information can be found at the LHC@home message board.
[2025-06-05 11:12:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:12:36] Checking for apptainer binary...
[2025-06-05 11:12:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:12:36] Running /usr/bin/apptainer --version
[2025-06-05 11:12:37] apptainer version 1.4.1-1.el9
[2025-06-05 11:12:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:12:37] c6-8-25-2.aglt2.org
[2025-06-05 11:12:37] apptainer works
[2025-06-05 11:12:37] Set ATHENA_PROC_NUMBER=8
[2025-06-05 11:12:37] Set ATHENA_CORE_NUMBER=8
[2025-06-05 11:12:38] Starting ATLAS job with PandaID=6668235186
[2025-06-05 11:12:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:06:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:06:02] 2025-06-05 18:05:42,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:06:02] 2025-06-05 18:05:44,606 | INFO     | monitor loop #706: job 0:6668235186 is in state 'finished'
[2025-06-05 14:06:02] 2025-06-05 18:05:44,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:06:02] 2025-06-05 18:05:47,112 | INFO     | monitor loop #707: job 0:6668235186 is in state 'finished'
[2025-06-05 14:06:02] 2025-06-05 18:05:47,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,617 | INFO     | monitor loop #708: job 0:6668235186 is in state 'finished'
[2025-06-05 14:06:02] 2025-06-05 18:05:49,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,634 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 14:06:02] 2025-06-05 18:05:49,634 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668235186/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,635 | INFO     | extracted standard info from prmon json
[2025-06-05 14:06:02] 2025-06-05 18:05:49,635 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:06:02] 2025-06-05 18:05:49,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:06:02] 2025-06-05 18:05:49,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:06:02] 2025-06-05 18:05:49,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:06:02] 2025-06-05 18:05:49,644 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:06:02] 2025-06-05 18:05:49,645 | INFO     | sum of square deviations: 1470212183.8511853
[2025-06-05 14:06:02] 2025-06-05 18:05:49,646 | INFO     | sum of deviations: 5751625627.089279
[2025-06-05 14:06:02] 2025-06-05 18:05:49,646 | INFO     | mean x: 1749141615.5297618
[2025-06-05 14:06:02] 2025-06-05 18:05:49,646 | INFO     | mean y: 2181280.4821428573
[2025-06-05 14:06:02] 2025-06-05 18:05:49,646 | INFO     | -- intersect: -6840645796.992025
[2025-06-05 14:06:02] 2025-06-05 18:05:49,646 | INFO     | intersect: -6840645796.992025
[2025-06-05 14:06:02] 2025-06-05 18:05:49,647 | INFO     | chi2: 2.9809898970954505
[2025-06-05 14:06:02] 2025-06-05 18:05:49,647 | INFO     | sum of square deviations: 1342806668.8466237
[2025-06-05 14:06:02] 2025-06-05 18:05:49,654 | INFO     | sum of deviations: 14742341062.877285
[2025-06-05 14:06:02] 2025-06-05 18:05:49,654 | INFO     | mean x: 1749141463.030675
[2025-06-05 14:06:02] 2025-06-05 18:05:49,654 | INFO     | mean y: 2191783.024539877
[2025-06-05 14:06:02] 2025-06-05 18:05:49,654 | INFO     | -- intersect: -19201198111.78966
[2025-06-05 14:06:02] 2025-06-05 18:05:49,654 | INFO     | intersect: -19201198111.78966
[2025-06-05 14:06:02] 2025-06-05 18:05:49,655 | INFO     | chi2: 2.338726606230383
[2025-06-05 14:06:02] 2025-06-05 18:05:49,655 | INFO     | current chi2=2.338726606230383 (change=21.545302501389266 %)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,655 | INFO     | right removable region: 162
[2025-06-05 14:06:02] 2025-06-05 18:05:49,655 | INFO     | sum of square deviations: 1342803618.8466237
[2025-06-05 14:06:02] 2025-06-05 18:05:49,656 | INFO     | sum of deviations: -23085848582.877296
[2025-06-05 14:06:02] 2025-06-05 18:05:49,656 | INFO     | mean x: 1749141768.030675
[2025-06-05 14:06:02] 2025-06-05 18:05:49,656 | INFO     | mean y: 2215517.975460123
[2025-06-05 14:06:02] 2025-06-05 18:05:49,656 | INFO     | -- intersect: 30073941152.30646
[2025-06-05 14:06:02] 2025-06-05 18:05:49,656 | INFO     | intersect: 30073941152.30646
[2025-06-05 14:06:02] 2025-06-05 18:05:49,657 | INFO     | chi2: 1.1455837381487868
[2025-06-05 14:06:02] 2025-06-05 18:05:49,657 | INFO     | current chi2=1.1455837381487868 (change=61.57035824693688 %)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,657 | INFO     | sum of square deviations: 1222976591.3417752
[2025-06-05 14:06:02] 2025-06-05 18:05:49,658 | INFO     | sum of deviations: -27442258090.949364
[2025-06-05 14:06:02] 2025-06-05 18:05:49,658 | INFO     | mean x: 1749141920.5316455
[2025-06-05 14:06:02] 2025-06-05 18:05:49,658 | INFO     | mean y: 2220975.189873418
[2025-06-05 14:06:02] 2025-06-05 18:05:49,658 | INFO     | -- intersect: 39251053995.17854
[2025-06-05 14:06:02] 2025-06-05 18:05:49,658 | INFO     | intersect: 39251053995.17854
[2025-06-05 14:06:02] 2025-06-05 18:05:49,663 | INFO     | chi2: 1.049351256312745
[2025-06-05 14:06:02] 2025-06-05 18:05:49,663 | INFO     | current chi2=1.049351256312745 (change=8.400300967221245 %)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,663 | INFO     | left removable region: 20
[2025-06-05 14:06:02] 2025-06-05 18:05:49,663 | INFO     | sum of square deviations: 887782627.3873258
[2025-06-05 14:06:02] 2025-06-05 18:05:49,664 | INFO     | sum of deviations: -5793507728.485918
[2025-06-05 14:06:02] 2025-06-05 18:05:49,664 | INFO     | mean x: 1749142042.528169
[2025-06-05 14:06:02] 2025-06-05 18:05:49,664 | INFO     | mean y: 2216017.2464788733
[2025-06-05 14:06:02] 2025-06-05 18:05:49,664 | INFO     | -- intersect: 11416798403.735811
[2025-06-05 14:06:02] 2025-06-05 18:05:49,665 | INFO     | intersect: 11416798403.735811
[2025-06-05 14:06:02] 2025-06-05 18:05:49,665 | INFO     | chi2: 0.2941912617569331
[2025-06-05 14:06:02] 2025-06-05 18:05:49,665 | INFO     | -- intersect: 11416798403.735811
[2025-06-05 14:06:02] 2025-06-05 18:05:49,665 | INFO     | current memory leak: -6.53 B/s (using 142 data points, chi2=0.29)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,666 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-06-05 14:06:02] 2025-06-05 18:05:49,666 | INFO     | ..............................
[2025-06-05 14:06:02] 2025-06-05 18:05:49,666 | INFO     | . Timing measurements:
[2025-06-05 14:06:02] 2025-06-05 18:05:49,666 | INFO     | . get job = 0 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,666 | INFO     | . initial setup = 6 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,666 | INFO     | . payload setup = 37 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,671 | INFO     | . stage-in = 1 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,671 | INFO     | . payload execution = 10220 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,671 | INFO     | . stage-out = 1 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,671 | INFO     | . log creation = 0 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,671 | INFO     | ..............................
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | 
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | job summary report
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | --------------------------------------------------
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | PanDA job id: 6668235186
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | task id: 44871837
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | errors: (none)
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | pilot state: finished 
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | transexitcode: 0
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | exeerrorcode: 0
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | exeerrordiag: 
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | exitcode: 0
[2025-06-05 14:06:02] 2025-06-05 18:05:49,877 | INFO     | exitmsg: OK
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | cpuconsumptiontime: 55701 s
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | nevents: 400
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | neventsw: 0
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | pid: 3991433
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | pgrp: 3991433
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | corecount: 8
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | event service: False
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 13: 2397448, 24: 2397504, 30: 2397738, 35: 2397894, 10263: 2426410, 10264: 2435351, 10268: 2435407, 10281: 2435577}
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | --------------------------------------------------
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | 
[2025-06-05 14:06:02] 2025-06-05 18:05:49,878 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 14:06:02] 2025-06-05 18:05:50,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:06:02] 2025-06-05 18:05:50,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:06:02] 2025-06-05 18:05:50,042 | INFO     | job 6668235186 has completed (purged errors)
[2025-06-05 14:06:02] 2025-06-05 18:05:50,042 | INFO     | overall cleanup function is called
[2025-06-05 14:06:02] 2025-06-05 18:05:51,051 | INFO     | --- collectZombieJob: --- 10, [3991433]
[2025-06-05 14:06:02] 2025-06-05 18:05:51,051 | INFO     | zombie collector waiting for pid 3991433
[2025-06-05 14:06:02] 2025-06-05 18:05:51,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:06:02] 2025-06-05 18:05:51,051 | INFO     | collected zombie processes
[2025-06-05 14:06:02] 2025-06-05 18:05:51,051 | INFO     | will attempt to kill all subprocesses of pid=3991433
[2025-06-05 14:06:02] 2025-06-05 18:05:51,501 | INFO     | process IDs to be killed: [3991433] (in reverse order)
[2025-06-05 14:06:02] 2025-06-05 18:05:51,675 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:06:02] 2025-06-05 18:05:51,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:06:02] 2025-06-05 18:05:51,690 | INFO     | did not find any defunct processes belonging to 3991433
[2025-06-05 14:06:02] 2025-06-05 18:05:51,703 | INFO     | did not find any defunct processes belonging to 3991433
[2025-06-05 14:06:02] 2025-06-05 18:05:51,704 | INFO     | ready for new job
[2025-06-05 14:06:02] 2025-06-05 18:05:51,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:06:02] 2025-06-05 18:05:51,706 | INFO     | **************************************
[2025-06-05 14:06:02] 2025-06-05 18:05:51,706 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:06:02] 2025-06-05 18:05:51,706 | INFO     | **************************************
[2025-06-05 14:06:02] 2025-06-05 18:05:51,706 | INFO     | 
[2025-06-05 14:06:02] 2025-06-05 18:05:51,728 | INFO     | architecture information:
[2025-06-05 14:06:02] 2025-06-05 18:05:51,729 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:06:02] 2025-06-05 18:05:51,791 | INFO     | cat /etc/os-release:
[2025-06-05 14:06:02] NAME="CentOS Linux"
[2025-06-05 14:06:02] VERSION="7 (Core)"
[2025-06-05 14:06:02] ID="centos"
[2025-06-05 14:06:02] ID_LIKE="rhel fedora"
[2025-06-05 14:06:02] VERSION_ID="7"
[2025-06-05 14:06:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:06:02] ANSI_COLOR="0;31"
[2025-06-05 14:06:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:06:02] HOME_URL="https://www.centos.org/"
[2025-06-05 14:06:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:06:02] 
[2025-06-05 14:06:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:06:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:06:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:06:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:06:02] 
[2025-06-05 14:06:02] 2025-06-05 18:05:51,791 | INFO     | **************************************
[2025-06-05 14:06:02] 2025-06-05 18:05:52,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 14:06:02] 2025-06-05 18:05:52,394 | INFO     | sufficient remaining disk space (76606865408 B)
[2025-06-05 14:06:02] 2025-06-05 18:05:52,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:06:02] 2025-06-05 18:05:52,394 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:06:02] 2025-06-05 18:05:52,394 | INFO     | update_server=False
[2025-06-05 14:06:02] 2025-06-05 18:05:52,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:06:02] 2025-06-05 18:05:52,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:06:02] 2025-06-05 18:05:52,633 | INFO     | all payload control threads have been joined
[2025-06-05 14:06:02] 2025-06-05 18:05:53,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:06:02] 2025-06-05 18:05:53,132 | INFO     | aborting loop
[2025-06-05 14:06:02] 2025-06-05 18:05:53,238 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:06:02] 2025-06-05 18:05:53,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:06:02] 2025-06-05 18:05:53,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:06:02] 2025-06-05 18:05:53,261 | INFO     | all data control threads have been joined
[2025-06-05 14:06:02] 2025-06-05 18:05:53,401 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:53,440 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:53,444 | INFO     | all job control threads have been joined
[2025-06-05 14:06:02] 2025-06-05 18:05:53,515 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:53,639 | INFO     | [payload] control thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:53,640 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:53,745 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:53,749 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:53,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:06:02] 2025-06-05 18:05:54,138 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:54,267 | INFO     | [data] control thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:54,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:54,447 | INFO     | [job] validate thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:54,451 | INFO     | [job] control thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:54,626 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:54,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:06:02] 2025-06-05 18:05:55,767 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:55,896 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:56,405 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:06:02] 2025-06-05 18:05:56,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703277680448)>', '<ExcThread(monitor, started 139702761924352)>']
[2025-06-05 14:06:02] 2025-06-05 18:05:57,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:06:02] 2025-06-05 18:05:57,262 | INFO     | [monitor] control thread has ended
[2025-06-05 14:06:02] 2025-06-05 18:06:01,919 | INFO     | all workflow threads have been joined
[2025-06-05 14:06:02] 2025-06-05 18:06:01,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:06:02] 2025-06-05 18:06:01,919 | INFO     | traces error code: 0
[2025-06-05 14:06:02] 2025-06-05 18:06:01,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:06:02] 2025-06-05 18:06:02,229 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:06:02] 2025-06-05 18:06:02,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:06:02] 2025-06-05 18:06:02,289 [wrapper] pilotpid: 3982560
[2025-06-05 14:06:02] 2025-06-05 18:06:02,326 [wrapper] Pilot exit status: 0
[2025-06-05 14:06:02] 2025-06-05 18:06:02,514 [wrapper] pandaids: 6668235186
[2025-06-05 14:06:02] 2025-06-05 18:06:02,639 [wrapper] cleanup supervisor_pilot  165783 3982561
[2025-06-05 14:06:02] 2025-06-05 18:06:02,650 [wrapper] Test setup, not cleaning
[2025-06-05 14:06:02] 2025-06-05 18:06:02,673 [wrapper] apfmon messages muted
[2025-06-05 14:06:02] 2025-06-05 18:06:02,704 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:06:02] 2025-06-05 18:06:02,747 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:06:02]  *** Error codes and diagnostics ***
[2025-06-05 14:06:02]     "exeErrorCode": 0,
[2025-06-05 14:06:02]     "exeErrorDiag": "",
[2025-06-05 14:06:02]     "pilotErrorCode": 0,
[2025-06-05 14:06:02]     "pilotErrorDiag": "",
[2025-06-05 14:06:02]  *** Listing of results directory ***
[2025-06-05 14:06:02] total 425904
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas      5111 May 28 04:58 queuedata.json
[2025-06-05 14:06:02] -rwx------. 1 boincer umatlas     37140 May 28 05:00 runpilot2-wrapper.sh
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas       100 Jun  5 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:06:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 11:12 run_atlas
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas       105 Jun  5 11:12 job.xml
[2025-06-05 14:06:02] -rw-r--r--. 2 boincer umatlas 227345553 Jun  5 11:12 EVNT.44871834._003199.pool.root.1
[2025-06-05 14:06:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:12 start_atlas.sh
[2025-06-05 14:06:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 11:12 shared
[2025-06-05 14:06:02] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 11:12 input.tar.gz
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas         0 Jun  5 11:12 boinc_lockfile
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 11:12 pandaJob.out
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas    983210 Jun  5 11:13 agis_schedconf.cvmfs.json
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas   1598969 Jun  5 11:13 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:06:02] drwx------. 4 boincer umatlas      4096 Jun  5 11:13 pilot3
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas      6853 Jun  5 14:01 init_data.xml
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas 202411878 Jun  5 14:04 HITS.44871837._081918.pool.root.1
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas        95 Jun  5 14:04 pilot_heartbeat.json
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas       531 Jun  5 14:04 boinc_task_state.xml
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas      1044 Jun  5 14:05 memory_monitor_summary.json
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas    359839 Jun  5 14:05 log.44871837._081918.job.log.tgz.1
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas        28 Jun  5 14:05 wrapper_checkpoint.txt
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 14:05 boinc_mmap_file
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas      7732 Jun  5 14:05 heartbeat.json
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas      4353 Jun  5 14:06 pilotlog.txt
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas    911414 Jun  5 14:06 log.44871837._081918.job.log.1
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas       357 Jun  5 14:06 output.list
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas       620 Jun  5 14:06 runtime_log
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas   1290240 Jun  5 14:06 result.tar.gz
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas      8665 Jun  5 14:06 runtime_log.err
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas       657 Jun  5 14:06 0avNDmlpRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMkbKDmCmW2qn.diag
[2025-06-05 14:06:02] -rw-r--r--. 1 boincer umatlas     21219 Jun  5 14:06 stderr.txt
[2025-06-05 14:06:02] HITS file was successfully produced:
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas 202411878 Jun  5 14:04 shared/HITS.pool.root.1
[2025-06-05 14:06:02]  *** Contents of shared directory: ***
[2025-06-05 14:06:02] total 421468
[2025-06-05 14:06:02] -rw-r--r--. 2 boincer umatlas 227345553 Jun  5 11:12 ATLAS.root_0
[2025-06-05 14:06:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:12 start_atlas.sh
[2025-06-05 14:06:02] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 11:12 input.tar.gz
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas 202411878 Jun  5 14:04 HITS.pool.root.1
[2025-06-05 14:06:02] -rw-------. 1 boincer umatlas   1290240 Jun  5 14:06 result.tar.gz
14:06:03 (3978410): run_atlas exited; CPU time 56041.448132
14:06:03 (3978410): called boinc_finish(0)

</stderr_txt>
]]>

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