Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:02:32 (3394867): wrapper (7.7.26015): starting
11:02:32 (3394867): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 11:02:32] Arguments: --nthreads 12
[2025-06-05 11:02:32] Threads: 12
[2025-06-05 11:02:32] Checking for CVMFS
[2025-06-05 11:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:02:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:02:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:02:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:02:32] 2.12.6.0 32194 2410 156624 146822 0 192 28453298 32935936 11729 16776704 0 10445123 99.666 7577251 37458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 11:02:32] CVMFS is ok
[2025-06-05 11:02:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:02:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:02:32] Further information can be found at the LHC@home message board.
[2025-06-05 11:02:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:02:32] Checking for apptainer binary...
[2025-06-05 11:02:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:02:32] Running /usr/bin/apptainer --version
[2025-06-05 11:02:32] apptainer version 1.4.1-1.el9
[2025-06-05 11:02:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:02:32] c6-1-24-4.aglt2.org
[2025-06-05 11:02:32] apptainer works
[2025-06-05 11:02:32] Set ATHENA_PROC_NUMBER=12
[2025-06-05 11:02:32] Set ATHENA_CORE_NUMBER=12
[2025-06-05 11:02:32] Starting ATLAS job with PandaID=6668046612
[2025-06-05 11:02:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:13:25]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:13:25]  guid=f2075151-cddf-4625-8750-4f9be76a2502
[2025-06-05 12:13:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 12:13:25]  is_altstaged=None
[2025-06-05 12:13:25]  is_tar=False
[2025-06-05 12:13:25]  lfn=log.44871837._079138.job.log.tgz.1
[2025-06-05 12:13:25]  mtime=0
[2025-06-05 12:13:25]  protocol_id=None
[2025-06-05 12:13:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 12:13:25]  replicas=None
[2025-06-05 12:13:25]  scope=mc23_13p6TeV
[2025-06-05 12:13:25]  status=None
[2025-06-05 12:13:25]  status_code=0
[2025-06-05 12:13:25]  storage_token=
[2025-06-05 12:13:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668046612/log.44871837._079138.job.log.tgz.1
[2025-06-05 12:13:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/77/log.44871837._079138.job.log.tgz.1
[2025-06-05 12:13:25]  workdir=None
[2025-06-05 12:13:25] ]
[2025-06-05 12:13:25] 2025-06-05 16:12:58,722 | INFO     | transferring file log.44871837._079138.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668046612/log.44871837._079138.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 12:13:25] 2025-06-05 16:12:58,722 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668046612/log.44871837._079138.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._079138.job
[2025-06-05 12:13:25] 2025-06-05 16:12:58,739 | INFO     | adding to output.list: log.44871837._079138.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/77/log.44871837._079138.job.log.tg
[2025-06-05 12:13:25] 2025-06-05 16:12:58,740 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 12:13:25] 2025-06-05 16:12:58,740 | INFO     | summary of transferred files:
[2025-06-05 12:13:25] 2025-06-05 16:12:58,740 | INFO     |  -- lfn=log.44871837._079138.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 12:13:25] 2025-06-05 16:12:58,741 | INFO     | stage-out finished correctly
[2025-06-05 12:13:25] 2025-06-05 16:13:00,432 | INFO     | monitor loop #316: job 0:6668046612 is in state 'finished'
[2025-06-05 12:13:25] 2025-06-05 16:13:00,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:13:25] 2025-06-05 16:13:00,966 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 12:13:25] 2025-06-05 16:13:01,053 | INFO     | job 6668046612 has state=finished
[2025-06-05 12:13:25] 2025-06-05 16:13:01,053 | INFO     | preparing for final server update for job 6668046612 in state='finished'
[2025-06-05 12:13:25] 2025-06-05 16:13:01,054 | INFO     | this job has now completed (state=finished)
[2025-06-05 12:13:25] 2025-06-05 16:13:01,054 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 12:13:25] 2025-06-05 16:13:01,054 | INFO     | log transfer has been attempted: DONE
[2025-06-05 12:13:25] 2025-06-05 16:13:01,054 | INFO     | job 6668046612 has finished - writing final server update
[2025-06-05 12:13:25] 2025-06-05 16:13:01,054 | INFO     | total number of processed events: 400 (read)
[2025-06-05 12:13:25] 2025-06-05 16:13:01,070 | INFO     | executing command: lscpu
[2025-06-05 12:13:25] 2025-06-05 16:13:01,144 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 12:13:25] 2025-06-05 16:13:02,935 | INFO     | monitor loop #317: job 0:6668046612 is in state 'finished'
[2025-06-05 12:13:25] 2025-06-05 16:13:02,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:13:25] 2025-06-05 16:13:05,291 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 12:13:25] 2025-06-05 16:13:05,291 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668046612/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:13:25] 2025-06-05 16:13:05,292 | INFO     | extracted standard info from prmon json
[2025-06-05 12:13:25] 2025-06-05 16:13:05,292 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:13:25] 2025-06-05 16:13:05,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:13:25] 2025-06-05 16:13:05,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:13:25] 2025-06-05 16:13:05,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:13:25] 2025-06-05 16:13:05,295 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:13:25] 2025-06-05 16:13:05,296 | INFO     | sum of square deviations: 73882315.5
[2025-06-05 12:13:25] 2025-06-05 16:13:05,296 | INFO     | sum of deviations: -3955066577.0
[2025-06-05 12:13:25] 2025-06-05 16:13:05,296 | INFO     | mean x: 1749137953.5
[2025-06-05 12:13:25] 2025-06-05 16:13:05,296 | INFO     | mean y: 2441713.193548387
[2025-06-05 12:13:25] 2025-06-05 16:13:05,296 | INFO     | -- intersect: 93637258267.50186
[2025-06-05 12:13:25] 2025-06-05 16:13:05,296 | INFO     | intersect: 93637258267.50186
[2025-06-05 12:13:25] 2025-06-05 16:13:05,297 | INFO     | chi2: 0.08415901861413055
[2025-06-05 12:13:25] 2025-06-05 16:13:05,297 | INFO     | -- intersect: 93637258267.50186
[2025-06-05 12:13:25] 2025-06-05 16:13:05,297 | INFO     | current memory leak: -53.53 B/s (using 62 data points, chi2=0.08)
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | ..............................
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . Timing measurements:
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . get job = 0 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . initial setup = 2 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . payload setup = 6 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . stage-in = 0 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . payload execution = 4190 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . stage-out = 0 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | . log creation = 0 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,298 | INFO     | ..............................
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | 
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | job summary report
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | --------------------------------------------------
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | PanDA job id: 6668046612
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | task id: 44871837
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | errors: (none)
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | pilot state: finished 
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | transexitcode: 0
[2025-06-05 12:13:25] 2025-06-05 16:13:05,399 | INFO     | exeerrorcode: 0
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | exeerrordiag: 
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | exitcode: 0
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | exitmsg: OK
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | cpuconsumptiontime: 45083 s
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | nevents: 400
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | neventsw: 0
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | pid: 3406153
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | pgrp: 3406153
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | corecount: 12
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | event service: False
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 4200: 2423543, 4201: 2432484, 4203: 2432540, 4207: 2432838}
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | --------------------------------------------------
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | 
[2025-06-05 12:13:25] 2025-06-05 16:13:05,400 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 12:13:25] 2025-06-05 16:13:05,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | job 6668046612 has completed (purged errors)
[2025-06-05 12:13:25] 2025-06-05 16:13:05,421 | INFO     | overall cleanup function is called
[2025-06-05 12:13:25] 2025-06-05 16:13:06,426 | INFO     | --- collectZombieJob: --- 10, [3406153]
[2025-06-05 12:13:25] 2025-06-05 16:13:06,426 | INFO     | zombie collector waiting for pid 3406153
[2025-06-05 12:13:25] 2025-06-05 16:13:06,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:13:25] 2025-06-05 16:13:06,427 | INFO     | collected zombie processes
[2025-06-05 12:13:25] 2025-06-05 16:13:06,427 | INFO     | will attempt to kill all subprocesses of pid=3406153
[2025-06-05 12:13:25] 2025-06-05 16:13:06,785 | INFO     | process IDs to be killed: [3406153] (in reverse order)
[2025-06-05 12:13:25] 2025-06-05 16:13:06,888 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:13:25] 2025-06-05 16:13:06,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:13:25] 2025-06-05 16:13:06,899 | INFO     | did not find any defunct processes belonging to 3406153
[2025-06-05 12:13:25] 2025-06-05 16:13:06,908 | INFO     | did not find any defunct processes belonging to 3406153
[2025-06-05 12:13:25] 2025-06-05 16:13:06,908 | INFO     | ready for new job
[2025-06-05 12:13:25] 2025-06-05 16:13:06,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:13:25] 2025-06-05 16:13:06,911 | INFO     | **************************************
[2025-06-05 12:13:25] 2025-06-05 16:13:06,911 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:13:25] 2025-06-05 16:13:06,911 | INFO     | **************************************
[2025-06-05 12:13:25] 2025-06-05 16:13:06,911 | INFO     | 
[2025-06-05 12:13:25] 2025-06-05 16:13:06,927 | INFO     | architecture information:
[2025-06-05 12:13:25] 2025-06-05 16:13:06,928 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:13:25] 2025-06-05 16:13:06,942 | INFO     | cat /etc/os-release:
[2025-06-05 12:13:25] NAME="CentOS Linux"
[2025-06-05 12:13:25] VERSION="7 (Core)"
[2025-06-05 12:13:25] ID="centos"
[2025-06-05 12:13:25] ID_LIKE="rhel fedora"
[2025-06-05 12:13:25] VERSION_ID="7"
[2025-06-05 12:13:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:13:25] ANSI_COLOR="0;31"
[2025-06-05 12:13:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:13:25] HOME_URL="https://www.centos.org/"
[2025-06-05 12:13:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:13:25] 
[2025-06-05 12:13:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:13:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:13:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:13:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:13:25] 
[2025-06-05 12:13:25] 2025-06-05 16:13:06,942 | INFO     | **************************************
[2025-06-05 12:13:25] 2025-06-05 16:13:07,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 12:13:25] 2025-06-05 16:13:07,461 | INFO     | sufficient remaining disk space (76479987712 B)
[2025-06-05 12:13:25] 2025-06-05 16:13:07,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:13:25] 2025-06-05 16:13:07,462 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:13:25] 2025-06-05 16:13:07,462 | INFO     | update_server=False
[2025-06-05 12:13:25] 2025-06-05 16:13:07,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:13:25] 2025-06-05 16:13:07,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:13:25] 2025-06-05 16:13:07,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:13:25] 2025-06-05 16:13:07,543 | INFO     | all data control threads have been joined
[2025-06-05 12:13:25] 2025-06-05 16:13:07,769 | INFO     | all payload control threads have been joined
[2025-06-05 12:13:25] 2025-06-05 16:13:07,845 | INFO     | all job control threads have been joined
[2025-06-05 12:13:25] 2025-06-05 16:13:07,945 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 12:13:25] 2025-06-05 16:13:07,946 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 12:13:25] 2025-06-05 16:13:07,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:13:25] 2025-06-05 16:13:07,946 | INFO     | will abort loop
[2025-06-05 12:13:25] 2025-06-05 16:13:08,057 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:13:25] 2025-06-05 16:13:08,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:13:25] 2025-06-05 16:13:08,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:13:25] 2025-06-05 16:13:08,467 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:08,545 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:08,548 | INFO     | [data] control thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:08,716 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:08,774 | INFO     | [payload] control thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:08,785 | INFO     | [job] validate thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:08,850 | INFO     | [job] control thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:08,951 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:09,020 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:09,075 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:09,383 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:09,428 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:09,468 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:10,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:13:25] 2025-06-05 16:13:11,413 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:11,468 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:17,942 | INFO     | job.realtimelogging is not enabled
[2025-06-05 12:13:25] 2025-06-05 16:13:18,944 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:13:25] 2025-06-05 16:13:20,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511633377088)>', '<ExcThread(monitor, started 140510920435456)>']
[2025-06-05 12:13:25] 2025-06-05 16:13:21,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:13:25] 2025-06-05 16:13:21,123 | INFO     | [monitor] control thread has ended
[2025-06-05 12:13:25] 2025-06-05 16:13:25,333 | INFO     | all workflow threads have been joined
[2025-06-05 12:13:25] 2025-06-05 16:13:25,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:13:25] 2025-06-05 16:13:25,334 | INFO     | traces error code: 0
[2025-06-05 12:13:25] 2025-06-05 16:13:25,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:13:25] 2025-06-05 16:13:25,501 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:13:25] 2025-06-05 16:13:25,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:13:25] 2025-06-05 16:13:25,508 [wrapper] pilotpid: 3398483
[2025-06-05 12:13:25] 2025-06-05 16:13:25,510 [wrapper] Pilot exit status: 0
[2025-06-05 12:13:25] 2025-06-05 16:13:25,521 [wrapper] pandaids: 6668046612
[2025-06-05 12:13:25] 2025-06-05 16:13:25,602 [wrapper] cleanup supervisor_pilot 3552886 3398484
[2025-06-05 12:13:25] 2025-06-05 16:13:25,605 [wrapper] Test setup, not cleaning
[2025-06-05 12:13:25] 2025-06-05 16:13:25,608 [wrapper] apfmon messages muted
[2025-06-05 12:13:25] 2025-06-05 16:13:25,610 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:13:25] 2025-06-05 16:13:25,613 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:13:25]  *** Error codes and diagnostics ***
[2025-06-05 12:13:25]     "exeErrorCode": 0,
[2025-06-05 12:13:25]     "exeErrorDiag": "",
[2025-06-05 12:13:25]     "pilotErrorCode": 0,
[2025-06-05 12:13:25]     "pilotErrorDiag": "",
[2025-06-05 12:13:25]  *** Listing of results directory ***
[2025-06-05 12:13:25] total 414552
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas      5111 May 28 01:20 queuedata.json
[2025-06-05 12:13:25] -rwx------. 1 boincer umatlas     37140 May 28 01:23 runpilot2-wrapper.sh
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas       100 Jun  5 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:13:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 11:02 run_atlas
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas       105 Jun  5 11:02 job.xml
[2025-06-05 12:13:25] -rw-r--r--. 2 boincer umatlas 224339420 Jun  5 11:02 EVNT.44871834._003093.pool.root.1
[2025-06-05 12:13:25] -rw-r--r--. 2 boincer umatlas    508884 Jun  5 11:02 input.tar.gz
[2025-06-05 12:13:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:02 start_atlas.sh
[2025-06-05 12:13:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 11:02 shared
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas         0 Jun  5 11:02 boinc_lockfile
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 11:02 pandaJob.out
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas    983210 Jun  5 11:02 agis_schedconf.cvmfs.json
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas   1598969 Jun  5 11:02 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:13:25] drwx------. 4 boincer umatlas      4096 Jun  5 11:02 pilot3
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 12:11 init_data.xml
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas 194743890 Jun  5 12:12 HITS.44871837._079138.pool.root.1
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas       529 Jun  5 12:12 boinc_task_state.xml
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas      1041 Jun  5 12:12 memory_monitor_summary.json
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas    364880 Jun  5 12:12 log.44871837._079138.job.log.tgz.1
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas        95 Jun  5 12:13 pilot_heartbeat.json
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas      7722 Jun  5 12:13 heartbeat.json
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 12:13 boinc_mmap_file
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas        27 Jun  5 12:13 wrapper_checkpoint.txt
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas      4611 Jun  5 12:13 pilotlog.txt
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas    426801 Jun  5 12:13 log.44871837._079138.job.log.1
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas       357 Jun  5 12:13 output.list
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas       620 Jun  5 12:13 runtime_log
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas    808960 Jun  5 12:13 result.tar.gz
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 12:13 runtime_log.err
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas       654 Jun  5 12:13 OOgMDm7QOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9JbKDmG9n9Jn.diag
[2025-06-05 12:13:25] -rw-r--r--. 1 boincer umatlas     21255 Jun  5 12:13 stderr.txt
[2025-06-05 12:13:25] HITS file was successfully produced:
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas 194743890 Jun  5 12:12 shared/HITS.pool.root.1
[2025-06-05 12:13:25]  *** Contents of shared directory: ***
[2025-06-05 12:13:25] total 410580
[2025-06-05 12:13:25] -rw-r--r--. 2 boincer umatlas 224339420 Jun  5 11:02 ATLAS.root_0
[2025-06-05 12:13:25] -rw-r--r--. 2 boincer umatlas    508884 Jun  5 11:02 input.tar.gz
[2025-06-05 12:13:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:02 start_atlas.sh
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas 194743890 Jun  5 12:12 HITS.pool.root.1
[2025-06-05 12:13:25] -rw-------. 1 boincer umatlas    808960 Jun  5 12:13 result.tar.gz
12:13:26 (3394867): run_atlas exited; CPU time 45161.365052
12:13:26 (3394867): called boinc_finish(0)

</stderr_txt>
]]>

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