Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:01:14 (56094): wrapper (7.7.26015): starting
11:01:14 (56094): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 11:01:14] Arguments: --nthreads 8
[2025-06-05 11:01:14] Threads: 8
[2025-06-05 11:01:14] Checking for CVMFS
[2025-06-05 11:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:01:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:01:14] 2.11.2.0 5200 30375 295640 146822 2 570 15639878 18432001 20023 130560 0 157492361 99.545 136169515 42195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 11:01:14] CVMFS is ok
[2025-06-05 11:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:01:14] Further information can be found at the LHC@home message board.
[2025-06-05 11:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:01:14] Checking for apptainer binary...
[2025-06-05 11:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:01:14] Running /usr/bin/apptainer --version
[2025-06-05 11:01:14] apptainer version 1.3.2-1.el7
[2025-06-05 11:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:01:15] c-212-5.aglt2.org
[2025-06-05 11:01:15] apptainer works
[2025-06-05 11:01:15] Set ATHENA_PROC_NUMBER=8
[2025-06-05 11:01:15] Set ATHENA_CORE_NUMBER=8
[2025-06-05 11:01:15] Starting ATLAS job with PandaID=6668326754
[2025-06-05 11:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:59:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:59:20] 2025-06-05 18:59:06,425 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 14:59:20] 2025-06-05 18:59:06,426 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668326754/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,426 | INFO     | extracted standard info from prmon json
[2025-06-05 14:59:20] 2025-06-05 18:59:06,426 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:59:20] 2025-06-05 18:59:06,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:59:20] 2025-06-05 18:59:06,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:59:20] 2025-06-05 18:59:06,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:59:20] 2025-06-05 18:59:06,430 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:59:20] 2025-06-05 18:59:06,430 | INFO     | sum of square deviations: 3973029533.9829106
[2025-06-05 14:59:20] 2025-06-05 18:59:06,431 | INFO     | sum of deviations: 21476005987.7265
[2025-06-05 14:59:20] 2025-06-05 18:59:06,432 | INFO     | mean x: 1749142821.5470085
[2025-06-05 14:59:20] 2025-06-05 18:59:06,432 | INFO     | mean y: 2461090.752136752
[2025-06-05 14:59:20] 2025-06-05 18:59:06,432 | INFO     | -- intersect: -9452440109.359093
[2025-06-05 14:59:20] 2025-06-05 18:59:06,432 | INFO     | intersect: -9452440109.359093
[2025-06-05 14:59:20] 2025-06-05 18:59:06,432 | INFO     | chi2: 2.2164980570905795
[2025-06-05 14:59:20] 2025-06-05 18:59:06,432 | INFO     | sum of square deviations: 3723753796.471628
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | sum of deviations: 36521148424.165924
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | mean x: 1749142669.048035
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | mean y: 2470128.2576419213
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | -- intersect: -17152450020.296206
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | intersect: -17152450020.296206
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | chi2: 1.4089919395511072
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | current chi2=1.4089919395511072 (change=36.431618559567845 %)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,434 | INFO     | sum of square deviations: 3485129421.45983
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | sum of deviations: 35610596266.40622
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | mean x: 1749142516.549107
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | mean y: 2469546.28125
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | -- intersect: -17870039745.82567
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | intersect: -17870039745.82567
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | chi2: 1.4095284005503623
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | current chi2=1.4095284005503623 (change=-0.03807409994311223 %)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,436 | INFO     | right removable region: 223
[2025-06-05 14:59:20] 2025-06-05 18:59:06,437 | INFO     | sum of square deviations: 3723747086.471628
[2025-06-05 14:59:20] 2025-06-05 18:59:06,438 | INFO     | sum of deviations: -13467605528.925766
[2025-06-05 14:59:20] 2025-06-05 18:59:06,438 | INFO     | mean x: 1749142974.048035
[2025-06-05 14:59:20] 2025-06-05 18:59:06,438 | INFO     | mean y: 2482265.7205240177
[2025-06-05 14:59:20] 2025-06-05 18:59:06,438 | INFO     | -- intersect: 6328574516.655798
[2025-06-05 14:59:20] 2025-06-05 18:59:06,438 | INFO     | intersect: 6328574516.655798
[2025-06-05 14:59:20] 2025-06-05 18:59:06,438 | INFO     | chi2: 0.8311113411730394
[2025-06-05 14:59:20] 2025-06-05 18:59:06,439 | INFO     | current chi2=0.8311113411730394 (change=62.50340312664324 %)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,439 | INFO     | sum of square deviations: 3485116001.45983
[2025-06-05 14:59:20] 2025-06-05 18:59:06,440 | INFO     | sum of deviations: -12185929176.526787
[2025-06-05 14:59:20] 2025-06-05 18:59:06,440 | INFO     | mean x: 1749143126.549107
[2025-06-05 14:59:20] 2025-06-05 18:59:06,440 | INFO     | mean y: 2481440.8660714286
[2025-06-05 14:59:20] 2025-06-05 18:59:06,440 | INFO     | -- intersect: 6118471339.282005
[2025-06-05 14:59:20] 2025-06-05 18:59:06,440 | INFO     | intersect: 6118471339.282005
[2025-06-05 14:59:20] 2025-06-05 18:59:06,441 | INFO     | chi2: 0.8302800798401366
[2025-06-05 14:59:20] 2025-06-05 18:59:06,441 | INFO     | current chi2=0.8302800798401366 (change=0.1000180471282629 %)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,441 | INFO     | left removable region: 20
[2025-06-05 14:59:20] 2025-06-05 18:59:06,441 | INFO     | sum of square deviations: 2593944614.403956
[2025-06-05 14:59:20] 2025-06-05 18:59:06,442 | INFO     | sum of deviations: 3748136841.418718
[2025-06-05 14:59:20] 2025-06-05 18:59:06,442 | INFO     | mean x: 1749143096.0541873
[2025-06-05 14:59:20] 2025-06-05 18:59:06,442 | INFO     | mean y: 2490496.5073891627
[2025-06-05 14:59:20] 2025-06-05 18:59:06,442 | INFO     | -- intersect: -2524944994.1460466
[2025-06-05 14:59:20] 2025-06-05 18:59:06,442 | INFO     | intersect: -2524944994.1460466
[2025-06-05 14:59:20] 2025-06-05 18:59:06,442 | INFO     | chi2: 0.0003006597998929463
[2025-06-05 14:59:20] 2025-06-05 18:59:06,443 | INFO     | -- intersect: -2524944994.1460466
[2025-06-05 14:59:20] 2025-06-05 18:59:06,443 | INFO     | current memory leak: 1.44 B/s (using 203 data points, chi2=0.00)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,443 | INFO     | ..............................
[2025-06-05 14:59:20] 2025-06-05 18:59:06,443 | INFO     | . Timing measurements:
[2025-06-05 14:59:20] 2025-06-05 18:59:06,443 | INFO     | . get job = 0 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,443 | INFO     | . initial setup = 2 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,443 | INFO     | . payload setup = 7 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,444 | INFO     | . stage-in = 0 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,444 | INFO     | . payload execution = 14225 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,444 | INFO     | . stage-out = 1 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,444 | INFO     | . log creation = 0 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,444 | INFO     | ..............................
[2025-06-05 14:59:20] 2025-06-05 18:59:06,523 | INFO     | 
[2025-06-05 14:59:20] 2025-06-05 18:59:06,523 | INFO     | job summary report
[2025-06-05 14:59:20] 2025-06-05 18:59:06,523 | INFO     | --------------------------------------------------
[2025-06-05 14:59:20] 2025-06-05 18:59:06,523 | INFO     | PanDA job id: 6668326754
[2025-06-05 14:59:20] 2025-06-05 18:59:06,523 | INFO     | task id: 44871837
[2025-06-05 14:59:20] 2025-06-05 18:59:06,523 | INFO     | errors: (none)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | pilot state: finished 
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | transexitcode: 0
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | exeerrorcode: 0
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | exeerrordiag: 
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | exitcode: 0
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | exitmsg: OK
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | cpuconsumptiontime: 45406 s
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | nevents: 400
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | neventsw: 0
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | pid: 85961
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | pgrp: 85961
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | corecount: 8
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | event service: False
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 14236: 2428234, 14238: 2437175, 14239: 2437231, 14246: 2437529}
[2025-06-05 14:59:20] 2025-06-05 18:59:06,524 | INFO     | --------------------------------------------------
[2025-06-05 14:59:20] 2025-06-05 18:59:06,525 | INFO     | 
[2025-06-05 14:59:20] 2025-06-05 18:59:06,525 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:59:20] 2025-06-05 18:59:06,549 | INFO     | job 6668326754 has completed (purged errors)
[2025-06-05 14:59:20] 2025-06-05 18:59:06,550 | INFO     | overall cleanup function is called
[2025-06-05 14:59:20] 2025-06-05 18:59:07,557 | INFO     | --- collectZombieJob: --- 10, [85961]
[2025-06-05 14:59:20] 2025-06-05 18:59:07,557 | INFO     | zombie collector waiting for pid 85961
[2025-06-05 14:59:20] 2025-06-05 18:59:07,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:59:20] 2025-06-05 18:59:07,557 | INFO     | collected zombie processes
[2025-06-05 14:59:20] 2025-06-05 18:59:07,557 | INFO     | will attempt to kill all subprocesses of pid=85961
[2025-06-05 14:59:20] 2025-06-05 18:59:07,811 | INFO     | process IDs to be killed: [85961] (in reverse order)
[2025-06-05 14:59:20] 2025-06-05 18:59:07,896 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:59:20] 2025-06-05 18:59:07,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:59:20] 2025-06-05 18:59:07,905 | INFO     | did not find any defunct processes belonging to 85961
[2025-06-05 14:59:20] 2025-06-05 18:59:07,914 | INFO     | did not find any defunct processes belonging to 85961
[2025-06-05 14:59:20] 2025-06-05 18:59:07,914 | INFO     | ready for new job
[2025-06-05 14:59:20] 2025-06-05 18:59:07,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:59:20] 2025-06-05 18:59:07,916 | INFO     | **************************************
[2025-06-05 14:59:20] 2025-06-05 18:59:07,917 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:59:20] 2025-06-05 18:59:07,917 | INFO     | **************************************
[2025-06-05 14:59:20] 2025-06-05 18:59:07,917 | INFO     | 
[2025-06-05 14:59:20] 2025-06-05 18:59:07,921 | INFO     | architecture information:
[2025-06-05 14:59:20] 2025-06-05 18:59:07,922 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:59:20] 2025-06-05 18:59:07,936 | INFO     | cat /etc/os-release:
[2025-06-05 14:59:20] NAME="CentOS Linux"
[2025-06-05 14:59:20] VERSION="7 (Core)"
[2025-06-05 14:59:20] ID="centos"
[2025-06-05 14:59:20] ID_LIKE="rhel fedora"
[2025-06-05 14:59:20] VERSION_ID="7"
[2025-06-05 14:59:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:59:20] ANSI_COLOR="0;31"
[2025-06-05 14:59:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:59:20] HOME_URL="https://www.centos.org/"
[2025-06-05 14:59:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:59:20] 
[2025-06-05 14:59:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:59:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:59:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:59:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:59:20] 
[2025-06-05 14:59:20] 2025-06-05 18:59:07,936 | INFO     | **************************************
[2025-06-05 14:59:20] 2025-06-05 18:59:08,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 14:59:20] 2025-06-05 18:59:08,469 | INFO     | sufficient remaining disk space (105208872960 B)
[2025-06-05 14:59:20] 2025-06-05 18:59:08,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:59:20] 2025-06-05 18:59:08,470 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:59:20] 2025-06-05 18:59:08,470 | INFO     | update_server=False
[2025-06-05 14:59:20] 2025-06-05 18:59:08,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:59:20] 2025-06-05 18:59:08,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:59:20] 2025-06-05 18:59:08,766 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:59:20] 2025-06-05 18:59:08,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:59:20] 2025-06-05 18:59:08,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:59:20] 2025-06-05 18:59:09,072 | INFO     | all job control threads have been joined
[2025-06-05 14:59:20] 2025-06-05 18:59:09,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:59:20] 2025-06-05 18:59:09,097 | INFO     | aborting loop
[2025-06-05 14:59:20] 2025-06-05 18:59:09,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:59:20] 2025-06-05 18:59:09,410 | INFO     | all data control threads have been joined
[2025-06-05 14:59:20] 2025-06-05 18:59:09,474 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:09,475 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:09,628 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:09,697 | INFO     | all payload control threads have been joined
[2025-06-05 14:59:20] 2025-06-05 18:59:09,700 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,078 | INFO     | [job] control thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:59:20] 2025-06-05 18:59:10,103 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,119 | INFO     | [job] validate thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,233 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,416 | INFO     | [data] control thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,564 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,577 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,627 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:10,703 | INFO     | [payload] control thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:11,317 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:14,100 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:59:20] 2025-06-05 18:59:15,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419905541952)>', '<ExcThread(monitor, started 140419123902208)>']
[2025-06-05 14:59:20] 2025-06-05 18:59:15,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:59:20] 2025-06-05 18:59:15,805 | INFO     | [monitor] control thread has ended
[2025-06-05 14:59:20] 2025-06-05 18:59:20,225 | INFO     | all workflow threads have been joined
[2025-06-05 14:59:20] 2025-06-05 18:59:20,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:59:20] 2025-06-05 18:59:20,226 | INFO     | traces error code: 0
[2025-06-05 14:59:20] 2025-06-05 18:59:20,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:59:20] 2025-06-05 18:59:20,383 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:59:20] 2025-06-05 18:59:20,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:59:20] 2025-06-05 18:59:20,401 [wrapper] pilotpid: 62038
[2025-06-05 14:59:20] 2025-06-05 18:59:20,450 [wrapper] Pilot exit status: 0
[2025-06-05 14:59:20] 2025-06-05 18:59:20,493 [wrapper] pandaids: 6668326754
[2025-06-05 14:59:20] 2025-06-05 18:59:20,557 [wrapper] cleanup supervisor_pilot  1585 62039
[2025-06-05 14:59:20] 2025-06-05 18:59:20,560 [wrapper] Test setup, not cleaning
[2025-06-05 14:59:20] 2025-06-05 18:59:20,564 [wrapper] apfmon messages muted
[2025-06-05 14:59:20] 2025-06-05 18:59:20,567 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:59:20] 2025-06-05 18:59:20,569 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:59:20]  *** Error codes and diagnostics ***
[2025-06-05 14:59:20]     "exeErrorCode": 0,
[2025-06-05 14:59:20]     "exeErrorDiag": "",
[2025-06-05 14:59:20]     "pilotErrorCode": 0,
[2025-06-05 14:59:20]     "pilotErrorDiag": "",
[2025-06-05 14:59:20]  *** Listing of results directory ***
[2025-06-05 14:59:20] total 423344
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas    495897 May 28 06:43 pilot3.tar.gz
[2025-06-05 14:59:20] -rwx------ 1 boincer umatlas     37140 May 28 06:51 runpilot2-wrapper.sh
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas      5111 May 28 06:51 queuedata.json
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas       100 Jun  5 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:59:20] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 11:01 run_atlas
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas       105 Jun  5 11:01 job.xml
[2025-06-05 14:59:20] -rw-r--r-- 2 boincer umatlas 224385300 Jun  5 11:01 EVNT.44871834._003242.pool.root.1
[2025-06-05 14:59:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 11:01 start_atlas.sh
[2025-06-05 14:59:20] drwxrwx--x 2 boincer umatlas      4096 Jun  5 11:01 shared
[2025-06-05 14:59:20] -rw-r--r-- 2 boincer umatlas    508870 Jun  5 11:01 input.tar.gz
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas         0 Jun  5 11:01 boinc_lockfile
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 11:01 pandaJob.out
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas    983210 Jun  5 11:01 agis_schedconf.cvmfs.json
[2025-06-05 14:59:20] drwx------ 4 boincer umatlas      4096 Jun  5 11:01 pilot3
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas      6387 Jun  5 14:55 init_data.xml
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas 202034622 Jun  5 14:58 HITS.44871837._083063.pool.root.1
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas       531 Jun  5 14:58 boinc_task_state.xml
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas        95 Jun  5 14:58 pilot_heartbeat.json
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas      1078 Jun  5 14:58 memory_monitor_summary.json
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas   1598969 Jun  5 14:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas    397711 Jun  5 14:58 log.44871837._083063.job.log.tgz.1
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas      7743 Jun  5 14:59 heartbeat.json
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 14:59 boinc_mmap_file
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas      4354 Jun  5 14:59 pilotlog.txt
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas        28 Jun  5 14:59 wrapper_checkpoint.txt
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas   1228202 Jun  5 14:59 log.44871837._083063.job.log.1
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas       357 Jun  5 14:59 output.list
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas       620 Jun  5 14:59 runtime_log
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas   1648640 Jun  5 14:59 result.tar.gz
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas      8655 Jun  5 14:59 runtime_log.err
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas       662 Jun  5 14:59 oSnMDm9YTe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVxbKDmc0RxRo.diag
[2025-06-05 14:59:20] -rw-r--r-- 1 boincer umatlas     20859 Jun  5 14:59 stderr.txt
[2025-06-05 14:59:20] HITS file was successfully produced:
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas 202034622 Jun  5 14:58 shared/HITS.pool.root.1
[2025-06-05 14:59:20]  *** Contents of shared directory: ***
[2025-06-05 14:59:20] total 418560
[2025-06-05 14:59:20] -rw-r--r-- 2 boincer umatlas 224385300 Jun  5 11:01 ATLAS.root_0
[2025-06-05 14:59:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 11:01 start_atlas.sh
[2025-06-05 14:59:20] -rw-r--r-- 2 boincer umatlas    508870 Jun  5 11:01 input.tar.gz
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas 202034622 Jun  5 14:58 HITS.pool.root.1
[2025-06-05 14:59:20] -rw------- 1 boincer umatlas   1648640 Jun  5 14:59 result.tar.gz
14:59:22 (56094): run_atlas exited; CPU time 44939.774867
14:59:22 (56094): called boinc_finish(0)

</stderr_txt>
]]>

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