Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:46 (2018857): wrapper (7.7.26015): starting
12:36:46 (2018857): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 12:36:46] Arguments: --nthreads 12
[2025-06-05 12:36:46] Threads: 12
[2025-06-05 12:36:46] Checking for CVMFS
[2025-06-05 12:36:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:36:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:36:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:36:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:36:46] 2.12.6.0 33246 2502 171756 146826 1 335 18383426 32935937 9851 16776704 0 9718555 99.642 6592957 28624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 12:36:46] CVMFS is ok
[2025-06-05 12:36:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:36:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:36:46] Further information can be found at the LHC@home message board.
[2025-06-05 12:36:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:36:46] Checking for apptainer binary...
[2025-06-05 12:36:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:36:46] Running /usr/bin/apptainer --version
[2025-06-05 12:36:46] apptainer version 1.4.1-1.el9
[2025-06-05 12:36:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:36:46] c6-1-26-1.aglt2.org
[2025-06-05 12:36:46] apptainer works
[2025-06-05 12:36:46] Set ATHENA_PROC_NUMBER=12
[2025-06-05 12:36:46] Set ATHENA_CORE_NUMBER=12
[2025-06-05 12:36:46] Starting ATLAS job with PandaID=6668233322
[2025-06-05 12:36:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:39:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:39:53] 2025-06-05 19:39:28,204 | INFO     | executing command: lscpu
[2025-06-05 15:39:53] 2025-06-05 19:39:28,270 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 15:39:53] 2025-06-05 19:39:30,872 | WARNING  | process 2031306 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 15:39:53] 2025-06-05 19:39:30,873 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668233322/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:39:53] 2025-06-05 19:39:31,163 | INFO     | number of running child processes to parent process 2031306: 1
[2025-06-05 15:39:53] 2025-06-05 19:39:31,163 | INFO     | maximum number of monitored processes: 6
[2025-06-05 15:39:53] 2025-06-05 19:39:33,052 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:39:53] 2025-06-05 19:39:33,053 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668233322/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,053 | INFO     | extracted standard info from prmon json
[2025-06-05 15:39:53] 2025-06-05 19:39:33,053 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:39:53] 2025-06-05 19:39:33,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:39:53] 2025-06-05 19:39:33,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:39:53] 2025-06-05 19:39:33,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:39:53] 2025-06-05 19:39:33,059 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:39:53] 2025-06-05 19:39:33,059 | INFO     | sum of square deviations: 1778228489.5754187
[2025-06-05 15:39:53] 2025-06-05 19:39:33,060 | INFO     | sum of deviations: -26821403828.284904
[2025-06-05 15:39:53] 2025-06-05 19:39:33,061 | INFO     | mean x: 1749146875.4189944
[2025-06-05 15:39:53] 2025-06-05 19:39:33,061 | INFO     | mean y: 2403152.0837988826
[2025-06-05 15:39:53] 2025-06-05 19:39:33,061 | INFO     | -- intersect: 26385162721.860584
[2025-06-05 15:39:53] 2025-06-05 19:39:33,061 | INFO     | intersect: 26385162721.860584
[2025-06-05 15:39:53] 2025-06-05 19:39:33,061 | INFO     | chi2: 1.9617060131878197
[2025-06-05 15:39:53] 2025-06-05 19:39:33,062 | INFO     | sum of square deviations: 1633346321.1724107
[2025-06-05 15:39:53] 2025-06-05 19:39:33,063 | INFO     | sum of deviations: -23690139156.93103
[2025-06-05 15:39:53] 2025-06-05 19:39:33,063 | INFO     | mean x: 1749146722.9310346
[2025-06-05 15:39:53] 2025-06-05 19:39:33,063 | INFO     | mean y: 2406407.672413793
[2025-06-05 15:39:53] 2025-06-05 19:39:33,063 | INFO     | -- intersect: 25372120555.24056
[2025-06-05 15:39:53] 2025-06-05 19:39:33,063 | INFO     | intersect: 25372120555.24056
[2025-06-05 15:39:53] 2025-06-05 19:39:33,063 | INFO     | chi2: 1.9531576022986565
[2025-06-05 15:39:53] 2025-06-05 19:39:33,064 | INFO     | current chi2=1.9531576022986565 (change=0.43576411713556223 %)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,064 | INFO     | right removable region: 173
[2025-06-05 15:39:53] 2025-06-05 19:39:33,064 | INFO     | sum of square deviations: 1633300571.1724107
[2025-06-05 15:39:53] 2025-06-05 19:39:33,065 | INFO     | sum of deviations: -54578173669.00002
[2025-06-05 15:39:53] 2025-06-05 19:39:33,065 | INFO     | mean x: 1749147027.9310346
[2025-06-05 15:39:53] 2025-06-05 19:39:33,065 | INFO     | mean y: 2432055.3333333335
[2025-06-05 15:39:53] 2025-06-05 19:39:33,065 | INFO     | -- intersect: 58451716864.2578
[2025-06-05 15:39:53] 2025-06-05 19:39:33,065 | INFO     | intersect: 58451716864.2578
[2025-06-05 15:39:53] 2025-06-05 19:39:33,065 | INFO     | chi2: 0.41229689100283706
[2025-06-05 15:39:53] 2025-06-05 19:39:33,065 | INFO     | current chi2=0.41229689100283706 (change=78.98273807435373 %)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,066 | INFO     | sum of square deviations: 1496465827.7159772
[2025-06-05 15:39:53] 2025-06-05 19:39:33,067 | INFO     | sum of deviations: -49397387919.8047
[2025-06-05 15:39:53] 2025-06-05 19:39:33,067 | INFO     | mean x: 1749147180.443787
[2025-06-05 15:39:53] 2025-06-05 19:39:33,067 | INFO     | mean y: 2426245.75739645
[2025-06-05 15:39:53] 2025-06-05 19:39:33,067 | INFO     | -- intersect: 57740665369.52666
[2025-06-05 15:39:53] 2025-06-05 19:39:33,067 | INFO     | intersect: 57740665369.52666
[2025-06-05 15:39:53] 2025-06-05 19:39:33,067 | INFO     | chi2: 0.40719930347019745
[2025-06-05 15:39:53] 2025-06-05 19:39:33,067 | INFO     | current chi2=0.40719930347019745 (change=1.236387575041049 %)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,068 | INFO     | left removable region: 20
[2025-06-05 15:39:53] 2025-06-05 19:39:33,068 | INFO     | sum of square deviations: 1110397677.5294125
[2025-06-05 15:39:53] 2025-06-05 19:39:33,069 | INFO     | sum of deviations: -31296280292.784325
[2025-06-05 15:39:53] 2025-06-05 19:39:33,069 | INFO     | mean x: 1749147302.4313726
[2025-06-05 15:39:53] 2025-06-05 19:39:33,069 | INFO     | mean y: 2412303.163398693
[2025-06-05 15:39:53] 2025-06-05 19:39:33,069 | INFO     | -- intersect: 49301690713.091286
[2025-06-05 15:39:53] 2025-06-05 19:39:33,069 | INFO     | intersect: 49301690713.091286
[2025-06-05 15:39:53] 2025-06-05 19:39:33,070 | INFO     | chi2: 0.36197647130461585
[2025-06-05 15:39:53] 2025-06-05 19:39:33,070 | INFO     | -- intersect: 49301690713.091286
[2025-06-05 15:39:53] 2025-06-05 19:39:33,070 | INFO     | current memory leak: -28.18 B/s (using 153 data points, chi2=0.36)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | ..............................
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . Timing measurements:
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . get job = 0 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . initial setup = 2 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . payload setup = 7 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . stage-in = 0 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . payload execution = 10919 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . stage-out = 2 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | . log creation = 0 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,071 | INFO     | ..............................
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | 
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | job summary report
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | --------------------------------------------------
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | PanDA job id: 6668233322
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | task id: 44871837
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | errors: (none)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | pilot state: finished 
[2025-06-05 15:39:53] 2025-06-05 19:39:33,176 | INFO     | transexitcode: 0
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | exeerrorcode: 0
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | exeerrordiag: 
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | exitcode: 0
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | exitmsg: OK
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | cpuconsumptiontime: 50263 s
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | nevents: 400
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | neventsw: 0
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | pid: 2031306
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | pgrp: 2031306
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | corecount: 12
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | event service: False
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | sizes: {0: 2397392, 5: 2397598, 11: 2397654, 10930: 2426379, 10931: 2426378, 10933: 2435375, 10934: 2435559, 10939: 2435729}
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | --------------------------------------------------
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | 
[2025-06-05 15:39:53] 2025-06-05 19:39:33,177 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:39:53] 2025-06-05 19:39:33,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:39:53] 2025-06-05 19:39:33,202 | INFO     | job 6668233322 has completed (purged errors)
[2025-06-05 15:39:53] 2025-06-05 19:39:33,203 | INFO     | overall cleanup function is called
[2025-06-05 15:39:53] 2025-06-05 19:39:34,212 | INFO     | --- collectZombieJob: --- 10, [2031306]
[2025-06-05 15:39:53] 2025-06-05 19:39:34,212 | INFO     | zombie collector waiting for pid 2031306
[2025-06-05 15:39:53] 2025-06-05 19:39:34,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:39:53] 2025-06-05 19:39:34,212 | INFO     | collected zombie processes
[2025-06-05 15:39:53] 2025-06-05 19:39:34,212 | INFO     | will attempt to kill all subprocesses of pid=2031306
[2025-06-05 15:39:53] 2025-06-05 19:39:34,506 | INFO     | process IDs to be killed: [2031306] (in reverse order)
[2025-06-05 15:39:53] 2025-06-05 19:39:34,610 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:39:53] 2025-06-05 19:39:34,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:39:53] 2025-06-05 19:39:34,624 | INFO     | did not find any defunct processes belonging to 2031306
[2025-06-05 15:39:53] 2025-06-05 19:39:34,638 | INFO     | did not find any defunct processes belonging to 2031306
[2025-06-05 15:39:53] 2025-06-05 19:39:34,638 | INFO     | ready for new job
[2025-06-05 15:39:53] 2025-06-05 19:39:34,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:39:53] 2025-06-05 19:39:34,641 | INFO     | **************************************
[2025-06-05 15:39:53] 2025-06-05 19:39:34,641 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:39:53] 2025-06-05 19:39:34,642 | INFO     | **************************************
[2025-06-05 15:39:53] 2025-06-05 19:39:34,642 | INFO     | 
[2025-06-05 15:39:53] 2025-06-05 19:39:34,658 | INFO     | architecture information:
[2025-06-05 15:39:53] 2025-06-05 19:39:34,658 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:39:53] 2025-06-05 19:39:34,678 | INFO     | cat /etc/os-release:
[2025-06-05 15:39:53] NAME="CentOS Linux"
[2025-06-05 15:39:53] VERSION="7 (Core)"
[2025-06-05 15:39:53] ID="centos"
[2025-06-05 15:39:53] ID_LIKE="rhel fedora"
[2025-06-05 15:39:53] VERSION_ID="7"
[2025-06-05 15:39:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:39:53] ANSI_COLOR="0;31"
[2025-06-05 15:39:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:39:53] HOME_URL="https://www.centos.org/"
[2025-06-05 15:39:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:39:53] 
[2025-06-05 15:39:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:39:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:39:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:39:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:39:53] 
[2025-06-05 15:39:53] 2025-06-05 19:39:34,678 | INFO     | **************************************
[2025-06-05 15:39:53] 2025-06-05 19:39:35,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:39:53] 2025-06-05 19:39:35,204 | INFO     | sufficient remaining disk space (76474744832 B)
[2025-06-05 15:39:53] 2025-06-05 19:39:35,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:39:53] 2025-06-05 19:39:35,205 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:39:53] 2025-06-05 19:39:35,205 | INFO     | update_server=False
[2025-06-05 15:39:53] 2025-06-05 19:39:35,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:39:53] 2025-06-05 19:39:35,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:39:53] 2025-06-05 19:39:35,206 | INFO     | aborting loop
[2025-06-05 15:39:53] 2025-06-05 19:39:35,206 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:39:53] 2025-06-05 19:39:35,207 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:39:53] 2025-06-05 19:39:35,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:39:53] 2025-06-05 19:39:35,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:39:53] 2025-06-05 19:39:35,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:39:53] 2025-06-05 19:39:35,672 | INFO     | all payload control threads have been joined
[2025-06-05 15:39:53] 2025-06-05 19:39:35,761 | INFO     | all job control threads have been joined
[2025-06-05 15:39:53] 2025-06-05 19:39:36,154 | INFO     | all data control threads have been joined
[2025-06-05 15:39:53] 2025-06-05 19:39:36,210 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:36,211 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:36,677 | INFO     | [payload] control thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:36,739 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:36,766 | INFO     | [job] control thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,000 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,007 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,019 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,021 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,159 | INFO     | [data] control thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,173 | INFO     | [job] validate thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,214 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:37,328 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:38,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:39:53] 2025-06-05 19:39:38,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:39:53] 2025-06-05 19:39:39,192 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:42,217 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:45,659 | INFO     | job.realtimelogging is not enabled
[2025-06-05 15:39:53] 2025-06-05 19:39:46,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:39:53] 2025-06-05 19:39:48,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400569112384)>', '<ExcThread(monitor, started 140399846872832)>']
[2025-06-05 15:39:53] 2025-06-05 19:39:49,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:39:53] 2025-06-05 19:39:49,273 | INFO     | [monitor] control thread has ended
[2025-06-05 15:39:53] 2025-06-05 19:39:53,459 | INFO     | all workflow threads have been joined
[2025-06-05 15:39:53] 2025-06-05 19:39:53,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:39:53] 2025-06-05 19:39:53,460 | INFO     | traces error code: 0
[2025-06-05 15:39:53] 2025-06-05 19:39:53,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:39:53] 2025-06-05 19:39:53,650 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:39:53] 2025-06-05 19:39:53,653 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:39:53] 2025-06-05 19:39:53,656 [wrapper] pilotpid: 2023620
[2025-06-05 15:39:53] 2025-06-05 19:39:53,659 [wrapper] Pilot exit status: 0
[2025-06-05 15:39:53] 2025-06-05 19:39:53,669 [wrapper] pandaids: 6668233322
[2025-06-05 15:39:53] 2025-06-05 19:39:53,733 [wrapper] cleanup supervisor_pilot 2420478 2023621
[2025-06-05 15:39:53] 2025-06-05 19:39:53,737 [wrapper] Test setup, not cleaning
[2025-06-05 15:39:53] 2025-06-05 19:39:53,740 [wrapper] apfmon messages muted
[2025-06-05 15:39:53] 2025-06-05 19:39:53,744 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:39:53] 2025-06-05 19:39:53,747 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:39:53]  *** Error codes and diagnostics ***
[2025-06-05 15:39:53]     "exeErrorCode": 0,
[2025-06-05 15:39:53]     "exeErrorDiag": "",
[2025-06-05 15:39:53]     "pilotErrorCode": 0,
[2025-06-05 15:39:53]     "pilotErrorDiag": "",
[2025-06-05 15:39:53]  *** Listing of results directory ***
[2025-06-05 15:39:53] total 420048
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas      5111 May 28 04:50 queuedata.json
[2025-06-05 15:39:53] -rwx------. 1 boincer umatlas     37140 May 28 04:51 runpilot2-wrapper.sh
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas       100 Jun  5 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:39:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 12:36 run_atlas
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas       105 Jun  5 12:36 job.xml
[2025-06-05 15:39:53] -rw-r--r--. 2 boincer umatlas 223956627 Jun  5 12:36 EVNT.44871834._003188.pool.root.1
[2025-06-05 15:39:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 12:36 start_atlas.sh
[2025-06-05 15:39:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 12:36 shared
[2025-06-05 15:39:53] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 12:36 input.tar.gz
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas         0 Jun  5 12:36 boinc_lockfile
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 12:36 pandaJob.out
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas    983229 Jun  5 12:36 agis_schedconf.cvmfs.json
[2025-06-05 15:39:53] drwx------. 4 boincer umatlas      4096 Jun  5 12:36 pilot3
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas      6840 Jun  5 15:37 init_data.xml
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas 199639117 Jun  5 15:38 HITS.44871837._081655.pool.root.1
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas       531 Jun  5 15:38 boinc_task_state.xml
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas        95 Jun  5 15:38 pilot_heartbeat.json
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas      1054 Jun  5 15:39 memory_monitor_summary.json
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas   1598969 Jun  5 15:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas    437631 Jun  5 15:39 log.44871837._081655.job.log.tgz.1
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas      7728 Jun  5 15:39 heartbeat.json
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas        28 Jun  5 15:39 wrapper_checkpoint.txt
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas      4548 Jun  5 15:39 pilotlog.txt
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 15:39 boinc_mmap_file
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas    920500 Jun  5 15:39 log.44871837._081655.job.log.1
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas       357 Jun  5 15:39 output.list
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas       620 Jun  5 15:39 runtime_log
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas   1372160 Jun  5 15:39 result.tar.gz
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas      8667 Jun  5 15:39 runtime_log.err
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas       657 Jun  5 15:39 6WdLDmzgRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhibKDmLQqFBo.diag
[2025-06-05 15:39:53] -rw-r--r--. 1 boincer umatlas     21220 Jun  5 15:39 stderr.txt
[2025-06-05 15:39:53] HITS file was successfully produced:
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas 199639117 Jun  5 15:38 shared/HITS.pool.root.1
[2025-06-05 15:39:53]  *** Contents of shared directory: ***
[2025-06-05 15:39:53] total 415528
[2025-06-05 15:39:53] -rw-r--r--. 2 boincer umatlas 223956627 Jun  5 12:36 ATLAS.root_0
[2025-06-05 15:39:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 12:36 start_atlas.sh
[2025-06-05 15:39:53] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 12:36 input.tar.gz
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas 199639117 Jun  5 15:38 HITS.pool.root.1
[2025-06-05 15:39:53] -rw-------. 1 boincer umatlas   1372160 Jun  5 15:39 result.tar.gz
15:39:55 (2018857): run_atlas exited; CPU time 50476.844288
15:39:55 (2018857): called boinc_finish(0)

</stderr_txt>
]]>

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