Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:11 (29770): wrapper (7.7.26015): starting
16:54:11 (29770): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:54:11] Arguments: --nthreads 8
[2025-06-05 16:54:11] Threads: 8
[2025-06-05 16:54:11] Checking for CVMFS
[2025-06-05 16:54:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:54:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:54:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:54:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:54:12] 2.11.2.0 30615 34771 93584 146822 0 159 15296896 25165825 4189 130560 0 18028497 99.842 18855610 2633 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 16:54:12] CVMFS is ok
[2025-06-05 16:54:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:54:12] Checking for apptainer binary...
[2025-06-05 16:54:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:54:12] Running /usr/bin/apptainer --version
[2025-06-05 16:54:12] apptainer version 1.3.2-1.el7
[2025-06-05 16:54:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:54:14] cg-vwn418.simple-grid.lan
[2025-06-05 16:54:14] apptainer works
[2025-06-05 16:54:14] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:54:14] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:54:14] Starting ATLAS job with PandaID=6668191022
[2025-06-05 16:54:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 22:53:46]  *** The last 200 lines of the pilot log: ***
[2025-06-05 22:53:46] 2025-06-05 20:07:59,971 | INFO     | extracted standard info from prmon json
[2025-06-05 22:53:46] 2025-06-05 20:07:59,971 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 22:53:46] 2025-06-05 20:07:59,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 22:53:46] 2025-06-05 20:07:59,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 22:53:46] 2025-06-05 20:07:59,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 22:53:46] 2025-06-05 20:07:59,979 | INFO     | fitting pss+swap vs Time
[2025-06-05 22:53:46] 2025-06-05 20:07:59,979 | INFO     | sum of square deviations: 8884603792.5
[2025-06-05 22:53:46] 2025-06-05 20:07:59,982 | INFO     | sum of deviations: 20613291044.000004
[2025-06-05 22:53:46] 2025-06-05 20:07:59,983 | INFO     | mean x: 1749144659.5
[2025-06-05 22:53:46] 2025-06-05 20:07:59,983 | INFO     | mean y: 2480758.2352941176
[2025-06-05 22:53:46] 2025-06-05 20:07:59,983 | INFO     | -- intersect: -4055733742.5360727
[2025-06-05 22:53:46] 2025-06-05 20:07:59,983 | INFO     | intersect: -4055733742.5360727
[2025-06-05 22:53:46] 2025-06-05 20:07:59,984 | INFO     | chi2: 2.458995108352947
[2025-06-05 22:53:46] 2025-06-05 20:07:59,984 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 22:53:46] 2025-06-05 20:07:59,990 | INFO     | sum of deviations: 40210099987.00001
[2025-06-05 22:53:46] 2025-06-05 20:07:59,991 | INFO     | mean x: 1749144507.0
[2025-06-05 22:53:46] 2025-06-05 20:07:59,991 | INFO     | mean y: 2487637.810631229
[2025-06-05 22:53:46] 2025-06-05 20:07:59,991 | INFO     | -- intersect: -8314915010.485483
[2025-06-05 22:53:46] 2025-06-05 20:07:59,991 | INFO     | intersect: -8314915010.485483
[2025-06-05 22:53:46] 2025-06-05 20:07:59,992 | INFO     | chi2: 1.6885611088146284
[2025-06-05 22:53:46] 2025-06-05 20:07:59,992 | INFO     | current chi2=1.6885611088146284 (change=31.331253849234407 %)
[2025-06-05 22:53:46] 2025-06-05 20:07:59,992 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 22:53:46] 2025-06-05 20:07:59,995 | INFO     | sum of deviations: 39183700994.00001
[2025-06-05 22:53:46] 2025-06-05 20:07:59,995 | INFO     | mean x: 1749144354.5
[2025-06-05 22:53:46] 2025-06-05 20:07:59,995 | INFO     | mean y: 2487260.1013513515
[2025-06-05 22:53:46] 2025-06-05 20:07:59,996 | INFO     | -- intersect: -8520316839.482011
[2025-06-05 22:53:46] 2025-06-05 20:07:59,996 | INFO     | intersect: -8520316839.482011
[2025-06-05 22:53:46] 2025-06-05 20:07:59,996 | INFO     | chi2: 1.6891331374406742
[2025-06-05 22:53:46] 2025-06-05 20:07:59,996 | INFO     | current chi2=1.6891331374406742 (change=-0.03387669081442588 %)
[2025-06-05 22:53:46] 2025-06-05 20:07:59,996 | INFO     | right removable region: 295
[2025-06-05 22:53:46] 2025-06-05 20:07:59,997 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,000 | INFO     | sum of deviations: -31746243481.0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,000 | INFO     | mean x: 1749144812.0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,000 | INFO     | mean y: 2499277.312292359
[2025-06-05 22:53:46] 2025-06-05 20:08:00,000 | INFO     | -- intersect: 6569166252.268665
[2025-06-05 22:53:46] 2025-06-05 20:08:00,000 | INFO     | intersect: 6569166252.268665
[2025-06-05 22:53:46] 2025-06-05 20:08:00,001 | INFO     | chi2: 0.8804491596584462
[2025-06-05 22:53:46] 2025-06-05 20:08:00,001 | INFO     | current chi2=0.8804491596584462 (change=64.19475757931957 %)
[2025-06-05 22:53:46] 2025-06-05 20:08:00,001 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,004 | INFO     | sum of deviations: -28099445161.999996
[2025-06-05 22:53:46] 2025-06-05 20:08:00,005 | INFO     | mean x: 1749144964.5
[2025-06-05 22:53:46] 2025-06-05 20:08:00,005 | INFO     | mean y: 2497916.114864865
[2025-06-05 22:53:46] 2025-06-05 20:08:00,005 | INFO     | -- intersect: 6114379741.117019
[2025-06-05 22:53:46] 2025-06-05 20:08:00,005 | INFO     | intersect: 6114379741.117019
[2025-06-05 22:53:46] 2025-06-05 20:08:00,005 | INFO     | chi2: 0.8636038395886282
[2025-06-05 22:53:46] 2025-06-05 20:08:00,006 | INFO     | current chi2=0.8636038395886282 (change=1.913264370239482 %)
[2025-06-05 22:53:46] 2025-06-05 20:08:00,006 | INFO     | left removable region: 20
[2025-06-05 22:53:46] 2025-06-05 20:08:00,006 | INFO     | sum of square deviations: 6448679050.0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,013 | INFO     | sum of deviations: 8659194915.0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,013 | INFO     | mean x: 1749144934.0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,013 | INFO     | mean y: 2498029.229090909
[2025-06-05 22:53:46] 2025-06-05 20:08:00,014 | INFO     | -- intersect: -2346229020.2417326
[2025-06-05 22:53:46] 2025-06-05 20:08:00,014 | INFO     | intersect: -2346229020.2417326
[2025-06-05 22:53:46] 2025-06-05 20:08:00,014 | INFO     | chi2: 0.0007535904223989102
[2025-06-05 22:53:46] 2025-06-05 20:08:00,014 | INFO     | -- intersect: -2346229020.2417326
[2025-06-05 22:53:46] 2025-06-05 20:08:00,015 | INFO     | current memory leak: 1.34 B/s (using 275 data points, chi2=0.00)
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | ..............................
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | . Timing measurements:
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | . get job = 0 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | . initial setup = 2 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | . payload setup = 19 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | . stage-in = 0 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | . payload execution = 18658 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,016 | INFO     | . stage-out = 3 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,017 | INFO     | . log creation = 1 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,017 | INFO     | ..............................
[2025-06-05 22:53:46] 2025-06-05 20:08:00,583 | INFO     | 
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | job summary report
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | --------------------------------------------------
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | PanDA job id: 6668191022
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | task id: 44871837
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | errors: (none)
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | pilot state: finished 
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | transexitcode: 0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | exeerrorcode: 0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,584 | INFO     | exeerrordiag: 
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | exitcode: 0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | exitmsg: OK
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | cpuconsumptiontime: 69271 s
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | nevents: 400
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | neventsw: 0
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | pid: 11882
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | pgrp: 11882
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | corecount: 8
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | event service: False
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | sizes: {0: 2396563, 1: 2397419, 2: 2397419, 12: 2397447, 14: 2397681, 23: 2397709, 18681: 2429544, 18686: 2438485, 18688: 2438541, 18771: 2438711}
[2025-06-05 22:53:46] 2025-06-05 20:08:00,585 | INFO     | --------------------------------------------------
[2025-06-05 22:53:46] 2025-06-05 20:08:00,586 | INFO     | 
[2025-06-05 22:53:46] 2025-06-05 20:08:00,586 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-05 22:53:46] 2025-06-05 20:08:00,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:00,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:00,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:00,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:00,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | job 6668191022 has completed (purged errors)
[2025-06-05 22:53:46] 2025-06-05 20:08:01,001 | INFO     | overall cleanup function is called
[2025-06-05 22:53:46] 2025-06-05 20:08:02,014 | INFO     | --- collectZombieJob: --- 10, [11882]
[2025-06-05 22:53:46] 2025-06-05 20:08:02,015 | INFO     | zombie collector waiting for pid 11882
[2025-06-05 22:53:46] 2025-06-05 20:08:02,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 22:53:46] 2025-06-05 20:08:02,015 | INFO     | collected zombie processes
[2025-06-05 22:53:46] 2025-06-05 20:08:02,015 | INFO     | will attempt to kill all subprocesses of pid=11882
[2025-06-05 22:53:46] 2025-06-05 20:08:02,129 | INFO     | process IDs to be killed: [11882] (in reverse order)
[2025-06-05 22:53:46] 2025-06-05 20:08:02,849 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 22:53:46] 2025-06-05 20:08:02,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 22:53:46] 2025-06-05 20:08:02,853 | INFO     | did not find any defunct processes belonging to 11882
[2025-06-05 22:53:46] 2025-06-05 20:08:02,857 | INFO     | did not find any defunct processes belonging to 11882
[2025-06-05 22:53:46] 2025-06-05 20:08:02,857 | INFO     | ready for new job
[2025-06-05 22:53:46] 2025-06-05 20:08:02,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 22:53:46] 2025-06-05 20:08:02,860 | INFO     | **************************************
[2025-06-05 22:53:46] 2025-06-05 20:08:02,860 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 22:53:46] 2025-06-05 20:08:02,860 | INFO     | **************************************
[2025-06-05 22:53:46] 2025-06-05 20:08:02,860 | INFO     | 
[2025-06-05 22:53:46] 2025-06-05 20:08:02,861 | INFO     | pilot is running in a VM
[2025-06-05 22:53:46] 2025-06-05 20:08:02,861 | INFO     | architecture information:
[2025-06-05 22:53:46] 2025-06-05 20:08:02,862 | INFO     | executing command: cat /etc/os-release
[2025-06-05 22:53:46] 2025-06-05 20:08:03,126 | INFO     | cat /etc/os-release:
[2025-06-05 22:53:46] NAME="CentOS Linux"
[2025-06-05 22:53:46] VERSION="7 (Core)"
[2025-06-05 22:53:46] ID="centos"
[2025-06-05 22:53:46] ID_LIKE="rhel fedora"
[2025-06-05 22:53:46] VERSION_ID="7"
[2025-06-05 22:53:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 22:53:46] ANSI_COLOR="0;31"
[2025-06-05 22:53:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 22:53:46] HOME_URL="https://www.centos.org/"
[2025-06-05 22:53:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 22:53:46] 
[2025-06-05 22:53:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 22:53:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 22:53:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 22:53:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 22:53:46] 
[2025-06-05 22:53:46] 2025-06-05 20:08:03,127 | INFO     | **************************************
[2025-06-05 22:53:46] 2025-06-05 20:08:03,630 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-05 22:53:46] 2025-06-05 20:08:03,929 | INFO     | sufficient remaining disk space (497080598528 B)
[2025-06-05 22:53:46] 2025-06-05 20:08:03,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 22:53:46] 2025-06-05 20:08:03,929 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 22:53:46] 2025-06-05 20:08:03,930 | INFO     | update_server=False
[2025-06-05 22:53:46] 2025-06-05 20:08:03,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 22:53:46] 2025-06-05 20:08:03,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 22:53:46] 2025-06-05 20:08:03,937 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 22:53:46] 2025-06-05 20:08:03,938 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 22:53:46] 2025-06-05 20:08:03,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 22:53:46] 2025-06-05 20:08:03,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 22:53:46] 2025-06-05 20:08:03,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 22:53:46] 2025-06-05 20:08:04,099 | INFO     | all data control threads have been joined
[2025-06-05 22:53:46] 2025-06-05 20:08:04,213 | INFO     | all payload control threads have been joined
[2025-06-05 22:53:46] 2025-06-05 20:08:04,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:53:46] 2025-06-05 20:08:04,249 | INFO     | aborting loop
[2025-06-05 22:53:46] 2025-06-05 20:08:04,934 | INFO     | [job] retrieve thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,105 | INFO     | [data] control thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,132 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:53:46] 2025-06-05 20:08:05,219 | INFO     | [payload] control thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,254 | INFO     | [job] job monitor thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,386 | INFO     | all job control threads have been joined
[2025-06-05 22:53:46] 2025-06-05 20:08:05,624 | INFO     | [data] copytool_in thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,766 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,881 | INFO     | [job] validate thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:05,952 | INFO     | [data] copytool_out thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:06,025 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:06,131 | INFO     | [payload] failed_post thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:06,183 | INFO     | [job] queue monitor thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:06,392 | INFO     | [job] control thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:06,497 | INFO     | [payload] validate_post thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:07,940 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 22:53:46] 2025-06-05 20:08:09,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067262355264)>', '<ExcThread(monitor, started 140066953336576)>']
[2025-06-05 22:53:46] 2025-06-05 20:08:10,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 22:53:46] 2025-06-05 20:08:10,980 | INFO     | [monitor] control thread has ended
[2025-06-05 22:53:46] 2025-06-05 20:08:15,013 | INFO     | all workflow threads have been joined
[2025-06-05 22:53:46] 2025-06-05 20:08:15,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 22:53:46] 2025-06-05 20:08:15,014 | INFO     | traces error code: 0
[2025-06-05 22:53:46] 2025-06-05 20:08:15,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 22:53:46] 2025-06-05 20:08:15,362 [wrapper] ==== pilot stdout END ====
[2025-06-05 22:53:46] 2025-06-05 20:08:15,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 22:53:46] 2025-06-05 20:08:15,502 [wrapper] pilotpid: 3280
[2025-06-05 22:53:46] 2025-06-05 20:08:15,577 [wrapper] Pilot exit status: 0
[2025-06-05 22:53:46] 2025-06-05 20:08:15,991 [wrapper] pandaids: 6668191022
[2025-06-05 22:53:46] 2025-06-05 20:08:17,040 [wrapper] cleanup supervisor_pilot 11275 3281
[2025-06-05 22:53:46] 2025-06-05 20:08:17,157 [wrapper] Test setup, not cleaning
[2025-06-05 22:53:46] 2025-06-05 20:08:17,241 [wrapper] apfmon messages muted
[2025-06-05 22:53:46] 2025-06-05 20:08:17,369 [wrapper] ==== wrapper stdout END ====
[2025-06-05 22:53:46] 2025-06-05 20:08:17,478 [wrapper] ==== wrapper stderr END ====
[2025-06-05 22:53:46]  *** Error codes and diagnostics ***
[2025-06-05 22:53:46]     "exeErrorCode": 0,
[2025-06-05 22:53:46]     "exeErrorDiag": "",
[2025-06-05 22:53:46]     "pilotErrorCode": 0,
[2025-06-05 22:53:46]     "pilotErrorDiag": "",
[2025-06-05 22:53:46]  *** Listing of results directory ***
[2025-06-05 22:53:46] total 414340
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc    495897 May 28 07:33 pilot3.tar.gz
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc      5111 May 28 07:50 queuedata.json
[2025-06-05 22:53:46] -rwx------. 1 boinc boinc     37140 May 28 07:52 runpilot2-wrapper.sh
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc       100 Jun  5 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 22:53:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 16:54 run_atlas
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc       105 Jun  5 16:54 job.xml
[2025-06-05 22:53:46] -rw-r--r--. 2 boinc boinc     15093 Jun  5 16:54 start_atlas.sh
[2025-06-05 22:53:46] drwxrwx--x. 2 boinc boinc        68 Jun  5 16:54 shared
[2025-06-05 22:53:46] -rw-r--r--. 2 boinc boinc    508877 Jun  5 16:54 input.tar.gz
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc      6392 Jun  5 16:54 init_data.xml
[2025-06-05 22:53:46] -rw-r--r--. 2 boinc boinc 224108884 Jun  5 16:54 EVNT.44871834._003107.pool.root.1
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc         0 Jun  5 16:54 boinc_lockfile
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc      2558 Jun  5 16:54 pandaJob.out
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc    983210 Jun  5 16:54 agis_schedconf.cvmfs.json
[2025-06-05 22:53:46] drwx------. 4 boinc boinc      4096 Jun  5 16:54 pilot3
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc 192276976 Jun  5 22:05 HITS.44871837._079584.pool.root.1
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc       531 Jun  5 22:05 boinc_task_state.xml
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc      1018 Jun  5 22:06 memory_monitor_summary.json
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc   1598969 Jun  5 22:06 agis_ddmendpoints.agis.ALL.json
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc    432424 Jun  5 22:06 log.44871837._079584.job.log.tgz.1
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc        95 Jun  5 22:07 pilot_heartbeat.json
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc      7690 Jun  5 22:08 heartbeat.json
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc      4539 Jun  5 22:08 pilotlog.txt
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc   1608244 Jun  5 22:08 log.44871837._079584.job.log.1
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc       357 Jun  5 22:08 output.list
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc       620 Jun  5 22:08 runtime_log
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc   2058240 Jun  5 22:08 result.tar.gz
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc      8659 Jun  5 22:08 runtime_log.err
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc       657 Jun  5 22:08 JczNDmUtOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLPbKDmysGmWo.diag
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc      8192 Jun  5 22:53 boinc_mmap_file
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc        28 Jun  5 22:53 wrapper_checkpoint.txt
[2025-06-05 22:53:46] -rw-r--r--. 1 boinc boinc     20500 Jun  5 22:53 stderr.txt
[2025-06-05 22:53:46] HITS file was successfully produced:
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc 192276976 Jun  5 22:05 shared/HITS.pool.root.1
[2025-06-05 22:53:46]  *** Contents of shared directory: ***
[2025-06-05 22:53:46] total 409160
[2025-06-05 22:53:46] -rw-r--r--. 2 boinc boinc     15093 Jun  5 16:54 start_atlas.sh
[2025-06-05 22:53:46] -rw-r--r--. 2 boinc boinc    508877 Jun  5 16:54 input.tar.gz
[2025-06-05 22:53:46] -rw-r--r--. 2 boinc boinc 224108884 Jun  5 16:54 ATLAS.root_0
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc 192276976 Jun  5 22:05 HITS.pool.root.1
[2025-06-05 22:53:46] -rw-------. 1 boinc boinc   2058240 Jun  5 22:08 result.tar.gz
22:53:48 (29770): run_atlas exited; CPU time 69500.463896
22:53:48 (29770): called boinc_finish(0)

</stderr_txt>
]]>

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