Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:48:24 (203525): wrapper (7.7.26015): starting
10:48:24 (203525): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 10:48:24] Arguments: --nthreads 12
[2025-06-05 10:48:24] Threads: 12
[2025-06-05 10:48:24] Checking for CVMFS
[2025-06-05 10:48:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:48:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:48:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:48:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:48:25] 2.12.6.0 3367424 24868 481972 146822 0 246 22535565 32935937 9174 16776704 0 90549944 99.619 89992404 32580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 10:48:25] CVMFS is ok
[2025-06-05 10:48:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:48:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:48:25] Further information can be found at the LHC@home message board.
[2025-06-05 10:48:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:48:25] Checking for apptainer binary...
[2025-06-05 10:48:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:48:25] Running /usr/bin/apptainer --version
[2025-06-05 10:48:25] apptainer version 1.4.1-1.el9
[2025-06-05 10:48:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:48:25] c6-2-29-4.aglt2.org
[2025-06-05 10:48:25] apptainer works
[2025-06-05 10:48:25] Set ATHENA_PROC_NUMBER=12
[2025-06-05 10:48:25] Set ATHENA_CORE_NUMBER=12
[2025-06-05 10:48:25] Starting ATLAS job with PandaID=6680839907
[2025-06-05 10:48:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:14:55]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:14:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 12:14:55]  is_altstaged=None
[2025-06-05 12:14:55]  is_tar=False
[2025-06-05 12:14:55]  lfn=log.44871837._102304.job.log.tgz.1
[2025-06-05 12:14:55]  mtime=0
[2025-06-05 12:14:55]  protocol_id=None
[2025-06-05 12:14:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 12:14:55]  replicas=None
[2025-06-05 12:14:55]  scope=mc23_13p6TeV
[2025-06-05 12:14:55]  status=None
[2025-06-05 12:14:55]  status_code=0
[2025-06-05 12:14:55]  storage_token=
[2025-06-05 12:14:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680839907/log.44871837._102304.job.log.tgz.1
[2025-06-05 12:14:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/f9/log.44871837._102304.job.log.tgz.1
[2025-06-05 12:14:55]  workdir=None
[2025-06-05 12:14:55] ]
[2025-06-05 12:14:55] 2025-06-05 16:14:16,529 | INFO     | transferring file log.44871837._102304.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680839907/log.44871837._102304.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 12:14:55] 2025-06-05 16:14:16,529 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680839907/log.44871837._102304.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._102304.job
[2025-06-05 12:14:55] 2025-06-05 16:14:16,548 | INFO     | adding to output.list: log.44871837._102304.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/f9/log.44871837._102304.job.log.tg
[2025-06-05 12:14:55] 2025-06-05 16:14:16,549 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 12:14:55] 2025-06-05 16:14:16,549 | INFO     | summary of transferred files:
[2025-06-05 12:14:55] 2025-06-05 16:14:16,549 | INFO     |  -- lfn=log.44871837._102304.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 12:14:55] 2025-06-05 16:14:16,549 | INFO     | stage-out finished correctly
[2025-06-05 12:14:55] 2025-06-05 16:14:16,642 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 12:14:55] 2025-06-05 16:14:17,811 | INFO     | job 6680839907 has state=finished
[2025-06-05 12:14:55] 2025-06-05 16:14:17,812 | INFO     | preparing for final server update for job 6680839907 in state='finished'
[2025-06-05 12:14:55] 2025-06-05 16:14:17,813 | INFO     | this job has now completed (state=finished)
[2025-06-05 12:14:55] 2025-06-05 16:14:17,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 12:14:55] 2025-06-05 16:14:17,814 | INFO     | log transfer has been attempted: DONE
[2025-06-05 12:14:55] 2025-06-05 16:14:17,814 | INFO     | job 6680839907 has finished - writing final server update
[2025-06-05 12:14:55] 2025-06-05 16:14:17,814 | INFO     | total number of processed events: 400 (read)
[2025-06-05 12:14:55] 2025-06-05 16:14:17,815 | INFO     | executing command: lscpu
[2025-06-05 12:14:55] 2025-06-05 16:14:17,870 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 12:14:55] 2025-06-05 16:14:17,954 | INFO     | monitor loop #361: job 0:6680839907 is in state 'finished'
[2025-06-05 12:14:55] 2025-06-05 16:14:17,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:14:55] 2025-06-05 16:14:20,459 | INFO     | monitor loop #362: job 0:6680839907 is in state 'finished'
[2025-06-05 12:14:55] 2025-06-05 16:14:20,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:14:55] 2025-06-05 16:14:21,905 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 12:14:55] 2025-06-05 16:14:21,913 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2859.1859464285703
[2025-06-05 12:14:55] 2025-06-05 16:14:21,923 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680839907/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:14:55] 2025-06-05 16:14:21,924 | INFO     | extracted standard info from prmon json
[2025-06-05 12:14:55] 2025-06-05 16:14:21,924 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:14:55] 2025-06-05 16:14:21,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:14:55] 2025-06-05 16:14:21,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:14:55] 2025-06-05 16:14:21,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:14:55] 2025-06-05 16:14:21,927 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:14:55] 2025-06-05 16:14:21,927 | INFO     | sum of square deviations: 141541473.94805193
[2025-06-05 12:14:55] 2025-06-05 16:14:21,928 | INFO     | sum of deviations: -15246519267.259737
[2025-06-05 12:14:55] 2025-06-05 16:14:21,928 | INFO     | mean x: 1749137561.025974
[2025-06-05 12:14:55] 2025-06-05 16:14:21,928 | INFO     | mean y: 2530414.1298701297
[2025-06-05 12:14:55] 2025-06-05 16:14:21,928 | INFO     | -- intersect: 188415571351.21884
[2025-06-05 12:14:55] 2025-06-05 16:14:21,928 | INFO     | intersect: 188415571351.21884
[2025-06-05 12:14:55] 2025-06-05 16:14:21,928 | INFO     | chi2: 0.14127680082332283
[2025-06-05 12:14:55] 2025-06-05 16:14:21,928 | INFO     | -- intersect: 188415571351.21884
[2025-06-05 12:14:55] 2025-06-05 16:14:21,929 | INFO     | current memory leak: -107.72 B/s (using 77 data points, chi2=0.14)
[2025-06-05 12:14:55] 2025-06-05 16:14:21,929 | INFO     | could have reported an average CPU frequency of 2926 MHz (6 samples)
[2025-06-05 12:14:55] 2025-06-05 16:14:21,929 | INFO     | ..............................
[2025-06-05 12:14:55] 2025-06-05 16:14:21,929 | INFO     | . Timing measurements:
[2025-06-05 12:14:55] 2025-06-05 16:14:21,929 | INFO     | . get job = 0 s
[2025-06-05 12:14:55] 2025-06-05 16:14:21,930 | INFO     | . initial setup = 2 s
[2025-06-05 12:14:55] 2025-06-05 16:14:21,930 | INFO     | . payload setup = 5 s
[2025-06-05 12:14:55] 2025-06-05 16:14:21,930 | INFO     | . stage-in = 0 s
[2025-06-05 12:14:55] 2025-06-05 16:14:21,930 | INFO     | . payload execution = 5116 s
[2025-06-05 12:14:55] 2025-06-05 16:14:21,930 | INFO     | . stage-out = 0 s
[2025-06-05 12:14:55] 2025-06-05 16:14:21,930 | INFO     | . log creation = 0 s
[2025-06-05 12:14:55] 2025-06-05 16:14:21,930 | INFO     | ..............................
[2025-06-05 12:14:55] 2025-06-05 16:14:22,031 | INFO     | 
[2025-06-05 12:14:55] 2025-06-05 16:14:22,031 | INFO     | job summary report
[2025-06-05 12:14:55] 2025-06-05 16:14:22,031 | INFO     | --------------------------------------------------
[2025-06-05 12:14:55] 2025-06-05 16:14:22,031 | INFO     | PanDA job id: 6680839907
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | task id: 44871837
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | errors: (none)
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | pilot state: finished 
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | transexitcode: 0
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | exeerrorcode: 0
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | exeerrordiag: 
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | exitcode: 0
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | exitmsg: OK
[2025-06-05 12:14:55] 2025-06-05 16:14:22,032 | INFO     | cpuconsumptiontime: 49415 s
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | nevents: 400
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | neventsw: 0
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | pid: 213589
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | pgrp: 213589
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | corecount: 12
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | event service: False
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | sizes: {0: 2397511, 1: 2397710, 4: 2397972, 11: 2398000, 5126: 2424419, 5128: 2433544, 5133: 2433682}
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | --------------------------------------------------
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | 
[2025-06-05 12:14:55] 2025-06-05 16:14:22,033 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 12:14:55] 2025-06-05 16:14:22,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,058 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,058 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,058 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,058 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:14:55] 2025-06-05 16:14:22,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:14:55] 2025-06-05 16:14:22,060 | INFO     | job 6680839907 has completed (purged errors)
[2025-06-05 12:14:55] 2025-06-05 16:14:22,060 | INFO     | overall cleanup function is called
[2025-06-05 12:14:55] 2025-06-05 16:14:23,069 | INFO     | --- collectZombieJob: --- 10, [213589]
[2025-06-05 12:14:55] 2025-06-05 16:14:23,070 | INFO     | zombie collector waiting for pid 213589
[2025-06-05 12:14:55] 2025-06-05 16:14:23,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:14:55] 2025-06-05 16:14:23,070 | INFO     | collected zombie processes
[2025-06-05 12:14:55] 2025-06-05 16:14:23,071 | INFO     | will attempt to kill all subprocesses of pid=213589
[2025-06-05 12:14:55] 2025-06-05 16:14:23,298 | INFO     | process IDs to be killed: [213589] (in reverse order)
[2025-06-05 12:14:55] 2025-06-05 16:14:23,380 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:14:55] 2025-06-05 16:14:23,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:14:55] 2025-06-05 16:14:23,395 | INFO     | did not find any defunct processes belonging to 213589
[2025-06-05 12:14:55] 2025-06-05 16:14:23,407 | INFO     | did not find any defunct processes belonging to 213589
[2025-06-05 12:14:55] 2025-06-05 16:14:23,408 | INFO     | ready for new job
[2025-06-05 12:14:55] 2025-06-05 16:14:23,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:14:55] 2025-06-05 16:14:23,413 | INFO     | ***************************************
[2025-06-05 12:14:55] 2025-06-05 16:14:23,414 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 12:14:55] 2025-06-05 16:14:23,414 | INFO     | ***************************************
[2025-06-05 12:14:55] 2025-06-05 16:14:23,414 | INFO     | 
[2025-06-05 12:14:55] 2025-06-05 16:14:23,431 | INFO     | architecture information:
[2025-06-05 12:14:55] 2025-06-05 16:14:23,432 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:14:55] 2025-06-05 16:14:23,451 | INFO     | cat /etc/os-release:
[2025-06-05 12:14:55] NAME="CentOS Linux"
[2025-06-05 12:14:55] VERSION="7 (Core)"
[2025-06-05 12:14:55] ID="centos"
[2025-06-05 12:14:55] ID_LIKE="rhel fedora"
[2025-06-05 12:14:55] VERSION_ID="7"
[2025-06-05 12:14:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:14:55] ANSI_COLOR="0;31"
[2025-06-05 12:14:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:14:55] HOME_URL="https://www.centos.org/"
[2025-06-05 12:14:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:14:55] 
[2025-06-05 12:14:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:14:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:14:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:14:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:14:55] 
[2025-06-05 12:14:55] 2025-06-05 16:14:23,452 | INFO     | ***************************************
[2025-06-05 12:14:55] 2025-06-05 16:14:23,956 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 12:14:55] 2025-06-05 16:14:23,978 | INFO     | sufficient remaining disk space (76539756544 B)
[2025-06-05 12:14:55] 2025-06-05 16:14:23,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:14:55] 2025-06-05 16:14:23,979 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:14:55] 2025-06-05 16:14:23,979 | INFO     | update_server=False
[2025-06-05 12:14:55] 2025-06-05 16:14:23,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:14:55] 2025-06-05 16:14:23,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:14:55] 2025-06-05 16:14:23,980 | INFO     | aborting loop
[2025-06-05 12:14:55] 2025-06-05 16:14:23,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:14:55] 2025-06-05 16:14:24,145 | INFO     | all payload control threads have been joined
[2025-06-05 12:14:55] 2025-06-05 16:14:24,253 | INFO     | all data control threads have been joined
[2025-06-05 12:14:55] 2025-06-05 16:14:24,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:14:55] 2025-06-05 16:14:24,732 | INFO     | all job control threads have been joined
[2025-06-05 12:14:55] 2025-06-05 16:14:24,983 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:24,984 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:24,984 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:25,150 | INFO     | [payload] control thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:25,258 | INFO     | [data] control thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:25,737 | INFO     | [job] control thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:25,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,028 | INFO     | [job] validate thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,028 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,029 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,074 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,078 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,242 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,476 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:26,659 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:27,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:14:55] 2025-06-05 16:14:31,246 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:14:55] 2025-06-05 16:14:31,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911964419904)>', '<ExcThread(monitor, started 139911109801728)>']
[2025-06-05 12:14:55] 2025-06-05 16:14:36,686 | INFO     | all workflow threads have been joined
[2025-06-05 12:14:55] 2025-06-05 16:14:36,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:14:55] 2025-06-05 16:14:36,686 | INFO     | traces error code: 0
[2025-06-05 12:14:55] 2025-06-05 16:14:36,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:14:55] 2025-06-05 16:14:54,856 | INFO     | PID=207130 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 12:14:55] 2025-06-05 16:14:54,856 | INFO     | .. there are 8 such processes running
[2025-06-05 12:14:55] 2025-06-05 16:14:54,856 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:14:55] 2025-06-05 16:14:54,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:14:55] 2025-06-05 16:14:54,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:14:55] 2025-06-05 16:14:54,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:14:55] 2025-06-05 16:14:54,857 | INFO     | [monitor] control thread has ended
[2025-06-05 12:14:55] 2025-06-05 16:14:55,050 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:14:55] 2025-06-05 16:14:55,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:14:55] 2025-06-05 16:14:55,056 [wrapper] pilotpid: 207130
[2025-06-05 12:14:55] 2025-06-05 16:14:55,059 [wrapper] Pilot exit status: 0
[2025-06-05 12:14:55] 2025-06-05 16:14:55,074 [wrapper] pandaids: 6680839907
[2025-06-05 12:14:55] 2025-06-05 16:14:55,151 [wrapper] cleanup supervisor_pilot  365912 207131
[2025-06-05 12:14:55] 2025-06-05 16:14:55,155 [wrapper] Test setup, not cleaning
[2025-06-05 12:14:55] 2025-06-05 16:14:55,159 [wrapper] apfmon messages muted
[2025-06-05 12:14:55] 2025-06-05 16:14:55,163 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:14:55] 2025-06-05 16:14:55,168 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:14:55]  *** Error codes and diagnostics ***
[2025-06-05 12:14:55]     "exeErrorCode": 0,
[2025-06-05 12:14:55]     "exeErrorDiag": "",
[2025-06-05 12:14:55]     "pilotErrorCode": 0,
[2025-06-05 12:14:55]     "pilotErrorDiag": "",
[2025-06-05 12:14:55]  *** Listing of results directory ***
[2025-06-05 12:14:55] total 424060
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas    529402 Jun  5 10:01 pilot3.tar.gz
[2025-06-05 12:14:55] -rwx------. 1 boincer umatlas     37140 Jun  5 10:47 runpilot2-wrapper.sh
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 10:47 queuedata.json
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas       100 Jun  5 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:14:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 10:48 run_atlas
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas       105 Jun  5 10:48 job.xml
[2025-06-05 12:14:55] -rw-r--r--. 2 boincer umatlas 226763802 Jun  5 10:48 EVNT.44871834._002161.pool.root.1
[2025-06-05 12:14:55] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 10:48 start_atlas.sh
[2025-06-05 12:14:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 10:48 shared
[2025-06-05 12:14:55] -rw-r--r--. 2 boincer umatlas    541906 Jun  5 10:48 input.tar.gz
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas         0 Jun  5 10:48 boinc_lockfile
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 10:48 pandaJob.out
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas    983210 Jun  5 10:48 agis_schedconf.cvmfs.json
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas   1598969 Jun  5 10:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:14:55] drwx------. 4 boincer umatlas      4096 Jun  5 10:48 pilot3
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 12:09 init_data.xml
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas 201871948 Jun  5 12:13 HITS.44871837._102304.pool.root.1
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas       529 Jun  5 12:13 boinc_task_state.xml
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas      1040 Jun  5 12:14 memory_monitor_summary.json
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas        95 Jun  5 12:14 pilot_heartbeat.json
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas    365857 Jun  5 12:14 log.44871837._102304.job.log.tgz.1
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas      7768 Jun  5 12:14 heartbeat.json
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 12:14 boinc_mmap_file
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas        27 Jun  5 12:14 wrapper_checkpoint.txt
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas       821 Jun  5 12:14 pilotlog.txt
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas    487911 Jun  5 12:14 log.44871837._102304.job.log.1
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas       357 Jun  5 12:14 output.list
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas       620 Jun  5 12:14 runtime_log
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas    870400 Jun  5 12:14 result.tar.gz
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas      8667 Jun  5 12:14 runtime_log.err
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas       654 Jun  5 12:14 jjKMDmz3Qh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm5nKDmMLg7Un.diag
[2025-06-05 12:14:55] -rw-r--r--. 1 boincer umatlas     21469 Jun  5 12:14 stderr.txt
[2025-06-05 12:14:55] HITS file was successfully produced:
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas 201871948 Jun  5 12:13 shared/HITS.pool.root.1
[2025-06-05 12:14:55]  *** Contents of shared directory: ***
[2025-06-05 12:14:55] total 420000
[2025-06-05 12:14:55] -rw-r--r--. 2 boincer umatlas 226763802 Jun  5 10:48 ATLAS.root_0
[2025-06-05 12:14:55] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 10:48 start_atlas.sh
[2025-06-05 12:14:55] -rw-r--r--. 2 boincer umatlas    541906 Jun  5 10:48 input.tar.gz
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas 201871948 Jun  5 12:13 HITS.pool.root.1
[2025-06-05 12:14:55] -rw-------. 1 boincer umatlas    870400 Jun  5 12:14 result.tar.gz
12:14:56 (203525): run_atlas exited; CPU time 49503.532069
12:14:56 (203525): called boinc_finish(0)

</stderr_txt>
]]>

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