Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:46:33 (28907): wrapper (7.7.26015): starting
10:46:33 (28907): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 10:46:33] Arguments: --nthreads 8
[2025-06-05 10:46:33] Threads: 8
[2025-06-05 10:46:33] Checking for CVMFS
[2025-06-05 10:46:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:46:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:46:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:46:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:46:34] 2.11.2.0 2891 37260 76384 146822 1 1 19579492 20275200 1 130560 0 11895165 99.976 6576304 7974 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 10:46:34] CVMFS is ok
[2025-06-05 10:46:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:46:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:46:34] Further information can be found at the LHC@home message board.
[2025-06-05 10:46:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:46:34] Checking for apptainer binary...
[2025-06-05 10:46:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:46:34] Running /usr/bin/apptainer --version
[2025-06-05 10:46:34] apptainer version 1.3.2-1.el7
[2025-06-05 10:46:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:46:36] c-115-14.aglt2.org
[2025-06-05 10:46:36] apptainer works
[2025-06-05 10:46:36] Set ATHENA_PROC_NUMBER=8
[2025-06-05 10:46:36] Set ATHENA_CORE_NUMBER=8
[2025-06-05 10:46:36] Starting ATLAS job with PandaID=6668234299
[2025-06-05 10:46:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:16:39]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:16:39] 2025-06-05 17:16:19,757 | INFO     | extracted standard info from prmon json
[2025-06-05 13:16:39] 2025-06-05 17:16:19,757 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:16:39] 2025-06-05 17:16:19,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:16:39] 2025-06-05 17:16:19,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:16:39] 2025-06-05 17:16:19,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:16:39] 2025-06-05 17:16:19,762 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:16:39] 2025-06-05 17:16:19,763 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,764 | INFO     | sum of deviations: -9214019195.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,764 | INFO     | mean x: 1749139300.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,764 | INFO     | mean y: 2500679.537414966
[2025-06-05 13:16:39] 2025-06-05 17:16:19,764 | INFO     | -- intersect: 16365510101.698164
[2025-06-05 13:16:39] 2025-06-05 17:16:19,765 | INFO     | intersect: 16365510101.698164
[2025-06-05 13:16:39] 2025-06-05 17:16:19,765 | INFO     | chi2: 2.3947658494193176
[2025-06-05 13:16:39] 2025-06-05 17:16:19,765 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 13:16:39] 2025-06-05 17:16:19,766 | INFO     | sum of deviations: 774743889.4999988
[2025-06-05 13:16:39] 2025-06-05 17:16:19,766 | INFO     | mean x: 1749139147.5
[2025-06-05 13:16:39] 2025-06-05 17:16:19,766 | INFO     | mean y: 2515942.7535211267
[2025-06-05 13:16:39] 2025-06-05 17:16:19,767 | INFO     | -- intersect: -1523856796.324397
[2025-06-05 13:16:39] 2025-06-05 17:16:19,767 | INFO     | intersect: -1523856796.324397
[2025-06-05 13:16:39] 2025-06-05 17:16:19,767 | INFO     | chi2: 1.6305914677192723
[2025-06-05 13:16:39] 2025-06-05 17:16:19,767 | INFO     | current chi2=1.6305914677192723 (change=31.91019205010553 %)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,767 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,768 | INFO     | sum of deviations: 860023872.0000033
[2025-06-05 13:16:39] 2025-06-05 17:16:19,768 | INFO     | mean x: 1749138995.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,769 | INFO     | mean y: 2516086.4817518247
[2025-06-05 13:16:39] 2025-06-05 17:16:19,769 | INFO     | -- intersect: -1884249048.1599834
[2025-06-05 13:16:39] 2025-06-05 17:16:19,769 | INFO     | intersect: -1884249048.1599834
[2025-06-05 13:16:39] 2025-06-05 17:16:19,769 | INFO     | chi2: 1.6312358017547468
[2025-06-05 13:16:39] 2025-06-05 17:16:19,769 | INFO     | current chi2=1.6312358017547468 (change=-0.039515356742036586 %)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,769 | INFO     | right removable region: 136
[2025-06-05 13:16:39] 2025-06-05 17:16:19,770 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 13:16:39] 2025-06-05 17:16:19,770 | INFO     | sum of deviations: -31047154933.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,771 | INFO     | mean x: 1749139452.5
[2025-06-05 13:16:39] 2025-06-05 17:16:19,771 | INFO     | mean y: 2534404.591549296
[2025-06-05 13:16:39] 2025-06-05 17:16:19,771 | INFO     | -- intersect: 61170540788.77475
[2025-06-05 13:16:39] 2025-06-05 17:16:19,771 | INFO     | intersect: 61170540788.77475
[2025-06-05 13:16:39] 2025-06-05 17:16:19,772 | INFO     | chi2: 0.9317404751275231
[2025-06-05 13:16:39] 2025-06-05 17:16:19,772 | INFO     | current chi2=0.9317404751275231 (change=61.09262726652581 %)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,772 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,773 | INFO     | sum of deviations: -27078380314.000008
[2025-06-05 13:16:39] 2025-06-05 17:16:19,773 | INFO     | mean x: 1749139605.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,773 | INFO     | mean y: 2527700.678832117
[2025-06-05 13:16:39] 2025-06-05 17:16:19,773 | INFO     | -- intersect: 59408508580.81684
[2025-06-05 13:16:39] 2025-06-05 17:16:19,773 | INFO     | intersect: 59408508580.81684
[2025-06-05 13:16:39] 2025-06-05 17:16:19,774 | INFO     | chi2: 0.9284975930047441
[2025-06-05 13:16:39] 2025-06-05 17:16:19,774 | INFO     | current chi2=0.9284975930047441 (change=0.3480456424666078 %)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,774 | INFO     | left removable region: 20
[2025-06-05 13:16:39] 2025-06-05 17:16:19,774 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,775 | INFO     | sum of deviations: -7610333160.0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,775 | INFO     | mean x: 1749139574.5
[2025-06-05 13:16:39] 2025-06-05 17:16:19,775 | INFO     | mean y: 2526973.5172413792
[2025-06-05 13:16:39] 2025-06-05 17:16:19,775 | INFO     | -- intersect: 27507297122.264713
[2025-06-05 13:16:39] 2025-06-05 17:16:19,775 | INFO     | intersect: 27507297122.264713
[2025-06-05 13:16:39] 2025-06-05 17:16:19,775 | INFO     | chi2: 0.08822762519651993
[2025-06-05 13:16:39] 2025-06-05 17:16:19,775 | INFO     | -- intersect: 27507297122.264713
[2025-06-05 13:16:39] 2025-06-05 17:16:19,776 | INFO     | current memory leak: -15.72 B/s (using 116 data points, chi2=0.09)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,776 | INFO     | ..............................
[2025-06-05 13:16:39] 2025-06-05 17:16:19,776 | INFO     | . Timing measurements:
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | . get job = 0 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | . initial setup = 2 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | . payload setup = 11 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | . stage-in = 0 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | . payload execution = 8925 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | . stage-out = 0 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | . log creation = 0 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,777 | INFO     | ..............................
[2025-06-05 13:16:39] 2025-06-05 17:16:19,884 | INFO     | 
[2025-06-05 13:16:39] 2025-06-05 17:16:19,885 | INFO     | job summary report
[2025-06-05 13:16:39] 2025-06-05 17:16:19,885 | INFO     | --------------------------------------------------
[2025-06-05 13:16:39] 2025-06-05 17:16:19,885 | INFO     | PanDA job id: 6668234299
[2025-06-05 13:16:39] 2025-06-05 17:16:19,885 | INFO     | task id: 44871837
[2025-06-05 13:16:39] 2025-06-05 17:16:19,885 | INFO     | errors: (none)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:16:39] 2025-06-05 17:16:19,886 | INFO     | pilot state: finished 
[2025-06-05 13:16:39] 2025-06-05 17:16:19,886 | INFO     | transexitcode: 0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,886 | INFO     | exeerrorcode: 0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | exeerrordiag: 
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | exitcode: 0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | exitmsg: OK
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | cpuconsumptiontime: 66468 s
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | nevents: 400
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | neventsw: 0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | pid: 6843
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | pgrp: 6843
[2025-06-05 13:16:39] 2025-06-05 17:16:19,887 | INFO     | corecount: 8
[2025-06-05 13:16:39] 2025-06-05 17:16:19,888 | INFO     | event service: False
[2025-06-05 13:16:39] 2025-06-05 17:16:19,888 | INFO     | sizes: {0: 2397390, 1: 2397390, 6: 2397624, 11: 2397652, 8940: 2425687, 8942: 2434628, 8943: 2434812, 8949: 2434982}
[2025-06-05 13:16:39] 2025-06-05 17:16:19,888 | INFO     | --------------------------------------------------
[2025-06-05 13:16:39] 2025-06-05 17:16:19,888 | INFO     | 
[2025-06-05 13:16:39] 2025-06-05 17:16:19,888 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 13:16:39] 2025-06-05 17:16:19,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:16:39] 2025-06-05 17:16:19,919 | INFO     | job 6668234299 has completed (purged errors)
[2025-06-05 13:16:39] 2025-06-05 17:16:19,919 | INFO     | overall cleanup function is called
[2025-06-05 13:16:39] 2025-06-05 17:16:20,927 | INFO     | --- collectZombieJob: --- 10, [6843]
[2025-06-05 13:16:39] 2025-06-05 17:16:20,927 | INFO     | zombie collector waiting for pid 6843
[2025-06-05 13:16:39] 2025-06-05 17:16:20,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:16:39] 2025-06-05 17:16:20,928 | INFO     | collected zombie processes
[2025-06-05 13:16:39] 2025-06-05 17:16:20,928 | INFO     | will attempt to kill all subprocesses of pid=6843
[2025-06-05 13:16:39] 2025-06-05 17:16:21,022 | INFO     | process IDs to be killed: [6843] (in reverse order)
[2025-06-05 13:16:39] 2025-06-05 17:16:21,080 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:16:39] 2025-06-05 17:16:21,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:16:39] 2025-06-05 17:16:21,087 | INFO     | did not find any defunct processes belonging to 6843
[2025-06-05 13:16:39] 2025-06-05 17:16:21,090 | INFO     | did not find any defunct processes belonging to 6843
[2025-06-05 13:16:39] 2025-06-05 17:16:21,090 | INFO     | ready for new job
[2025-06-05 13:16:39] 2025-06-05 17:16:21,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:16:39] 2025-06-05 17:16:21,093 | INFO     | **************************************
[2025-06-05 13:16:39] 2025-06-05 17:16:21,093 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:16:39] 2025-06-05 17:16:21,093 | INFO     | **************************************
[2025-06-05 13:16:39] 2025-06-05 17:16:21,094 | INFO     | 
[2025-06-05 13:16:39] 2025-06-05 17:16:21,094 | INFO     | architecture information:
[2025-06-05 13:16:39] 2025-06-05 17:16:21,095 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:16:39] 2025-06-05 17:16:21,113 | INFO     | cat /etc/os-release:
[2025-06-05 13:16:39] NAME="CentOS Linux"
[2025-06-05 13:16:39] VERSION="7 (Core)"
[2025-06-05 13:16:39] ID="centos"
[2025-06-05 13:16:39] ID_LIKE="rhel fedora"
[2025-06-05 13:16:39] VERSION_ID="7"
[2025-06-05 13:16:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:16:39] ANSI_COLOR="0;31"
[2025-06-05 13:16:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:16:39] HOME_URL="https://www.centos.org/"
[2025-06-05 13:16:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:16:39] 
[2025-06-05 13:16:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:16:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:16:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:16:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:16:39] 
[2025-06-05 13:16:39] 2025-06-05 17:16:21,114 | INFO     | **************************************
[2025-06-05 13:16:39] 2025-06-05 17:16:21,617 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 13:16:39] 2025-06-05 17:16:21,637 | INFO     | sufficient remaining disk space (18609078272 B)
[2025-06-05 13:16:39] 2025-06-05 17:16:21,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:16:39] 2025-06-05 17:16:21,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:16:39] 2025-06-05 17:16:21,638 | INFO     | update_server=False
[2025-06-05 13:16:39] 2025-06-05 17:16:21,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:16:39] 2025-06-05 17:16:21,639 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:16:39] 2025-06-05 17:16:21,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:16:39] 2025-06-05 17:16:21,640 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:16:39] 2025-06-05 17:16:21,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:16:39] 2025-06-05 17:16:21,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:16:39] 2025-06-05 17:16:21,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:16:39] 2025-06-05 17:16:21,855 | INFO     | all payload control threads have been joined
[2025-06-05 13:16:39] 2025-06-05 17:16:21,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:16:39] 2025-06-05 17:16:21,979 | INFO     | aborting loop
[2025-06-05 13:16:39] 2025-06-05 17:16:22,088 | INFO     | all job control threads have been joined
[2025-06-05 13:16:39] 2025-06-05 17:16:22,189 | INFO     | all data control threads have been joined
[2025-06-05 13:16:39] 2025-06-05 17:16:22,645 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:22,646 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:22,735 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:22,861 | INFO     | [payload] control thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:22,985 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,094 | INFO     | [job] control thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,148 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,194 | INFO     | [data] control thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,548 | INFO     | [job] validate thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,554 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,555 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,643 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,849 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:23,923 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:24,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:16:39] 2025-06-05 17:16:28,484 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:32,011 | INFO     | job.realtimelogging is not enabled
[2025-06-05 13:16:39] 2025-06-05 17:16:33,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:16:39] 2025-06-05 17:16:33,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033604204352)>', '<ExcThread(monitor, started 140033013036800)>']
[2025-06-05 13:16:39] 2025-06-05 17:16:34,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:16:39] 2025-06-05 17:16:34,700 | INFO     | [monitor] control thread has ended
[2025-06-05 13:16:39] 2025-06-05 17:16:38,838 | INFO     | all workflow threads have been joined
[2025-06-05 13:16:39] 2025-06-05 17:16:38,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:16:39] 2025-06-05 17:16:38,838 | INFO     | traces error code: 0
[2025-06-05 13:16:39] 2025-06-05 17:16:38,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:16:39] 2025-06-05 17:16:39,084 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:16:39] 2025-06-05 17:16:39,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:16:39] 2025-06-05 17:16:39,092 [wrapper] pilotpid: 32649
[2025-06-05 13:16:39] 2025-06-05 17:16:39,096 [wrapper] Pilot exit status: 0
[2025-06-05 13:16:39] 2025-06-05 17:16:39,113 [wrapper] pandaids: 6668234299
[2025-06-05 13:16:39] 2025-06-05 17:16:39,166 [wrapper] cleanup supervisor_pilot 25521 32650
[2025-06-05 13:16:39] 2025-06-05 17:16:39,170 [wrapper] Test setup, not cleaning
[2025-06-05 13:16:39] 2025-06-05 17:16:39,175 [wrapper] apfmon messages muted
[2025-06-05 13:16:39] 2025-06-05 17:16:39,180 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:16:39] 2025-06-05 17:16:39,184 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:16:39]  *** Error codes and diagnostics ***
[2025-06-05 13:16:39]     "exeErrorCode": 0,
[2025-06-05 13:16:39]     "exeErrorDiag": "",
[2025-06-05 13:16:39]     "pilotErrorCode": 0,
[2025-06-05 13:16:39]     "pilotErrorDiag": "",
[2025-06-05 13:16:39]  *** Listing of results directory ***
[2025-06-05 13:16:39] total 418704
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas      5111 May 28 04:53 queuedata.json
[2025-06-05 13:16:39] -rwx------ 1 boincer umatlas     37140 May 28 04:54 runpilot2-wrapper.sh
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas       100 Jun  5 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:16:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 10:46 run_atlas
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas       105 Jun  5 10:46 job.xml
[2025-06-05 13:16:39] -rw-r--r-- 2 boincer umatlas 224162138 Jun  5 10:46 EVNT.44871834._003191.pool.root.1
[2025-06-05 13:16:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 10:46 start_atlas.sh
[2025-06-05 13:16:39] drwxrwx--x 2 boincer umatlas      4096 Jun  5 10:46 shared
[2025-06-05 13:16:39] -rw-r--r-- 2 boincer umatlas    508885 Jun  5 10:46 input.tar.gz
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas         0 Jun  5 10:46 boinc_lockfile
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 10:46 pandaJob.out
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas    983210 Jun  5 10:46 agis_schedconf.cvmfs.json
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas   1598969 Jun  5 10:46 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:16:39] drwx------ 4 boincer umatlas      4096 Jun  5 10:46 pilot3
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas      5825 Jun  5 13:09 init_data.xml
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas 198476039 Jun  5 13:15 HITS.44871837._081708.pool.root.1
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas       529 Jun  5 13:15 boinc_task_state.xml
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas        95 Jun  5 13:15 pilot_heartbeat.json
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas      1049 Jun  5 13:16 memory_monitor_summary.json
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas    330151 Jun  5 13:16 log.44871837._081708.job.log.tgz.1
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas      7745 Jun  5 13:16 heartbeat.json
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas        27 Jun  5 13:16 wrapper_checkpoint.txt
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 13:16 boinc_mmap_file
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas      4548 Jun  5 13:16 pilotlog.txt
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas    809588 Jun  5 13:16 log.44871837._081708.job.log.1
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas       357 Jun  5 13:16 output.list
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas       620 Jun  5 13:16 runtime_log
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas   1157120 Jun  5 13:16 result.tar.gz
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas       661 Jun  5 13:16 wyWMDm6iRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ibKDmCWbPIm.diag
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 13:16 runtime_log.err
[2025-06-05 13:16:39] -rw-r--r-- 1 boincer umatlas     20750 Jun  5 13:16 stderr.txt
[2025-06-05 13:16:39] HITS file was successfully produced:
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas 198476039 Jun  5 13:15 shared/HITS.pool.root.1
[2025-06-05 13:16:39]  *** Contents of shared directory: ***
[2025-06-05 13:16:39] total 414396
[2025-06-05 13:16:39] -rw-r--r-- 2 boincer umatlas 224162138 Jun  5 10:46 ATLAS.root_0
[2025-06-05 13:16:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 10:46 start_atlas.sh
[2025-06-05 13:16:39] -rw-r--r-- 2 boincer umatlas    508885 Jun  5 10:46 input.tar.gz
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas 198476039 Jun  5 13:15 HITS.pool.root.1
[2025-06-05 13:16:39] -rw------- 1 boincer umatlas   1157120 Jun  5 13:16 result.tar.gz
13:16:40 (28907): run_atlas exited; CPU time 66424.030576
13:16:40 (28907): called boinc_finish(0)

</stderr_txt>
]]>

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