Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:40:49 (1306914): wrapper (7.7.26015): starting
10:40:49 (1306914): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 10:40:49] Arguments: --nthreads 8
[2025-06-05 10:40:49] Threads: 8
[2025-06-05 10:40:49] Checking for CVMFS
[2025-06-05 10:40:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:40:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:40:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:40:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:40:50] 2.12.6.0 5779 32978 477608 146768 -2018 1115 28047168 32935936 16648 16776704 3 92932506 99.646 89677472 10235 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 10:40:50] CVMFS is ok
[2025-06-05 10:40:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:40:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:40:50] Further information can be found at the LHC@home message board.
[2025-06-05 10:40:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:40:50] Checking for apptainer binary...
[2025-06-05 10:40:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:40:50] Running /usr/bin/apptainer --version
[2025-06-05 10:40:50] apptainer version 1.4.1-1.el9
[2025-06-05 10:40:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:40:50] c6-12-25-2.aglt2.org
[2025-06-05 10:40:50] apptainer works
[2025-06-05 10:40:50] Set ATHENA_PROC_NUMBER=8
[2025-06-05 10:40:50] Set ATHENA_CORE_NUMBER=8
[2025-06-05 10:40:50] Starting ATLAS job with PandaID=6668233186
[2025-06-05 10:40:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:46:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:46:06] 2025-06-05 18:45:50,173 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 14:46:06] 2025-06-05 18:45:50,174 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668233186/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,176 | INFO     | extracted standard info from prmon json
[2025-06-05 14:46:06] 2025-06-05 18:45:50,177 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:46:06] 2025-06-05 18:45:50,177 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:46:06] 2025-06-05 18:45:50,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:46:06] 2025-06-05 18:45:50,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:46:06] 2025-06-05 18:45:50,192 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:46:06] 2025-06-05 18:45:50,193 | INFO     | sum of square deviations: 4286517580.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,198 | INFO     | sum of deviations: 67250286523.5
[2025-06-05 14:46:06] 2025-06-05 18:45:50,198 | INFO     | mean x: 1749141804.5
[2025-06-05 14:46:06] 2025-06-05 18:45:50,199 | INFO     | mean y: 2396000.9541666666
[2025-06-05 14:46:06] 2025-06-05 18:45:50,199 | INFO     | -- intersect: -27439527501.63341
[2025-06-05 14:46:06] 2025-06-05 18:45:50,199 | INFO     | intersect: -27439527501.63341
[2025-06-05 14:46:06] 2025-06-05 18:45:50,200 | INFO     | chi2: 3.3442801762682963
[2025-06-05 14:46:06] 2025-06-05 18:45:50,201 | INFO     | sum of square deviations: 4024149870.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,206 | INFO     | sum of deviations: 81126508238.00002
[2025-06-05 14:46:06] 2025-06-05 18:45:50,206 | INFO     | mean x: 1749141652.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,206 | INFO     | mean y: 2403909.9319148934
[2025-06-05 14:46:06] 2025-06-05 18:45:50,206 | INFO     | -- intersect: -35260138297.62432
[2025-06-05 14:46:06] 2025-06-05 18:45:50,207 | INFO     | intersect: -35260138297.62432
[2025-06-05 14:46:06] 2025-06-05 18:45:50,207 | INFO     | chi2: 2.5540189255319734
[2025-06-05 14:46:06] 2025-06-05 18:45:50,208 | INFO     | current chi2=2.5540189255319734 (change=23.63023458214357 %)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,208 | INFO     | right removable region: 234
[2025-06-05 14:46:06] 2025-06-05 18:45:50,209 | INFO     | sum of square deviations: 4024149870.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,213 | INFO     | sum of deviations: 16302086459.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,214 | INFO     | mean x: 1749141957.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,214 | INFO     | mean y: 2425486.9829787235
[2025-06-05 14:46:06] 2025-06-05 18:45:50,214 | INFO     | -- intersect: -7083459565.324594
[2025-06-05 14:46:06] 2025-06-05 18:45:50,214 | INFO     | intersect: -7083459565.324594
[2025-06-05 14:46:06] 2025-06-05 18:45:50,215 | INFO     | chi2: 1.3456883791678491
[2025-06-05 14:46:06] 2025-06-05 18:45:50,216 | INFO     | current chi2=1.3456883791678491 (change=59.76149400647912 %)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,217 | INFO     | sum of square deviations: 3772712597.5
[2025-06-05 14:46:06] 2025-06-05 18:45:50,221 | INFO     | sum of deviations: -8647449700.5
[2025-06-05 14:46:06] 2025-06-05 18:45:50,221 | INFO     | mean x: 1749142109.5
[2025-06-05 14:46:06] 2025-06-05 18:45:50,221 | INFO     | mean y: 2440574.708695652
[2025-06-05 14:46:06] 2025-06-05 18:45:50,222 | INFO     | -- intersect: 4011656230.560868
[2025-06-05 14:46:06] 2025-06-05 18:45:50,222 | INFO     | intersect: 4011656230.560868
[2025-06-05 14:46:06] 2025-06-05 18:45:50,223 | INFO     | chi2: 0.9106773113851232
[2025-06-05 14:46:06] 2025-06-05 18:45:50,223 | INFO     | current chi2=0.9106773113851232 (change=32.32628552917499 %)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,224 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,228 | INFO     | sum of deviations: -16190520631.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,229 | INFO     | mean x: 1749142262.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,229 | INFO     | mean y: 2445317.76
[2025-06-05 14:46:06] 2025-06-05 18:45:50,229 | INFO     | -- intersect: 8020491400.177898
[2025-06-05 14:46:06] 2025-06-05 18:45:50,229 | INFO     | intersect: 8020491400.177898
[2025-06-05 14:46:06] 2025-06-05 18:45:50,230 | INFO     | chi2: 0.8500607043763069
[2025-06-05 14:46:06] 2025-06-05 18:45:50,231 | INFO     | current chi2=0.8500607043763069 (change=6.656211399032178 %)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,231 | INFO     | left removable region: 30
[2025-06-05 14:46:06] 2025-06-05 18:45:50,233 | INFO     | sum of square deviations: 2632440055.0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,236 | INFO     | sum of deviations: -5330468590.999999
[2025-06-05 14:46:06] 2025-06-05 18:45:50,237 | INFO     | mean x: 1749142536.5
[2025-06-05 14:46:06] 2025-06-05 18:45:50,237 | INFO     | mean y: 2457635.382352941
[2025-06-05 14:46:06] 2025-06-05 18:45:50,237 | INFO     | -- intersect: 3544323416.6319547
[2025-06-05 14:46:06] 2025-06-05 18:45:50,237 | INFO     | intersect: 3544323416.6319547
[2025-06-05 14:46:06] 2025-06-05 18:45:50,238 | INFO     | chi2: 0.032047777736489445
[2025-06-05 14:46:06] 2025-06-05 18:45:50,238 | INFO     | -- intersect: 3544323416.6319547
[2025-06-05 14:46:06] 2025-06-05 18:45:50,239 | INFO     | current memory leak: -2.02 B/s (using 204 data points, chi2=0.03)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,240 | INFO     | ..............................
[2025-06-05 14:46:06] 2025-06-05 18:45:50,241 | INFO     | . Timing measurements:
[2025-06-05 14:46:06] 2025-06-05 18:45:50,241 | INFO     | . get job = 0 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,241 | INFO     | . initial setup = 4 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,241 | INFO     | . payload setup = 13 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,241 | INFO     | . stage-in = 0 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,241 | INFO     | . payload execution = 14621 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,242 | INFO     | . stage-out = 3 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,242 | INFO     | . log creation = 0 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,242 | INFO     | ..............................
[2025-06-05 14:46:06] 2025-06-05 18:45:50,506 | INFO     | 
[2025-06-05 14:46:06] 2025-06-05 18:45:50,507 | INFO     | job summary report
[2025-06-05 14:46:06] 2025-06-05 18:45:50,507 | INFO     | --------------------------------------------------
[2025-06-05 14:46:06] 2025-06-05 18:45:50,507 | INFO     | PanDA job id: 6668233186
[2025-06-05 14:46:06] 2025-06-05 18:45:50,508 | INFO     | task id: 44871837
[2025-06-05 14:46:06] 2025-06-05 18:45:50,508 | INFO     | errors: (none)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:46:06] 2025-06-05 18:45:50,508 | INFO     | pilot state: finished 
[2025-06-05 14:46:06] 2025-06-05 18:45:50,509 | INFO     | transexitcode: 0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,509 | INFO     | exeerrorcode: 0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,509 | INFO     | exeerrordiag: 
[2025-06-05 14:46:06] 2025-06-05 18:45:50,509 | INFO     | exitcode: 0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,509 | INFO     | exitmsg: OK
[2025-06-05 14:46:06] 2025-06-05 18:45:50,510 | INFO     | cpuconsumptiontime: 109524 s
[2025-06-05 14:46:06] 2025-06-05 18:45:50,510 | INFO     | nevents: 400
[2025-06-05 14:46:06] 2025-06-05 18:45:50,510 | INFO     | neventsw: 0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,510 | INFO     | pid: 1321696
[2025-06-05 14:46:06] 2025-06-05 18:45:50,510 | INFO     | pgrp: 1321696
[2025-06-05 14:46:06] 2025-06-05 18:45:50,511 | INFO     | corecount: 8
[2025-06-05 14:46:06] 2025-06-05 18:45:50,511 | INFO     | event service: False
[2025-06-05 14:46:06] 2025-06-05 18:45:50,511 | INFO     | sizes: {0: 2397170, 1: 2397255, 2: 2397369, 11: 2397603, 13: 2397631, 14640: 2428836, 14645: 2437777, 14648: 2437833, 14658: 2438003}
[2025-06-05 14:46:06] 2025-06-05 18:45:50,511 | INFO     | --------------------------------------------------
[2025-06-05 14:46:06] 2025-06-05 18:45:50,511 | INFO     | 
[2025-06-05 14:46:06] 2025-06-05 18:45:50,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 14:46:06] 2025-06-05 18:45:50,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:46:06] 2025-06-05 18:45:50,550 | INFO     | job 6668233186 has completed (purged errors)
[2025-06-05 14:46:06] 2025-06-05 18:45:50,551 | INFO     | overall cleanup function is called
[2025-06-05 14:46:06] 2025-06-05 18:45:51,561 | INFO     | --- collectZombieJob: --- 10, [1321696]
[2025-06-05 14:46:06] 2025-06-05 18:45:51,561 | INFO     | zombie collector waiting for pid 1321696
[2025-06-05 14:46:06] 2025-06-05 18:45:51,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:46:06] 2025-06-05 18:45:51,562 | INFO     | collected zombie processes
[2025-06-05 14:46:06] 2025-06-05 18:45:51,562 | INFO     | will attempt to kill all subprocesses of pid=1321696
[2025-06-05 14:46:06] 2025-06-05 18:45:52,495 | INFO     | process IDs to be killed: [1321696] (in reverse order)
[2025-06-05 14:46:06] 2025-06-05 18:45:52,732 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:46:06] 2025-06-05 18:45:52,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:46:06] 2025-06-05 18:45:52,765 | INFO     | did not find any defunct processes belonging to 1321696
[2025-06-05 14:46:06] 2025-06-05 18:45:52,796 | INFO     | did not find any defunct processes belonging to 1321696
[2025-06-05 14:46:06] 2025-06-05 18:45:52,796 | INFO     | ready for new job
[2025-06-05 14:46:06] 2025-06-05 18:45:52,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:46:06] 2025-06-05 18:45:52,801 | INFO     | **************************************
[2025-06-05 14:46:06] 2025-06-05 18:45:52,801 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:46:06] 2025-06-05 18:45:52,802 | INFO     | **************************************
[2025-06-05 14:46:06] 2025-06-05 18:45:52,802 | INFO     | 
[2025-06-05 14:46:06] 2025-06-05 18:45:52,828 | INFO     | architecture information:
[2025-06-05 14:46:06] 2025-06-05 18:45:52,829 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:46:06] 2025-06-05 18:45:52,857 | INFO     | cat /etc/os-release:
[2025-06-05 14:46:06] NAME="CentOS Linux"
[2025-06-05 14:46:06] VERSION="7 (Core)"
[2025-06-05 14:46:06] ID="centos"
[2025-06-05 14:46:06] ID_LIKE="rhel fedora"
[2025-06-05 14:46:06] VERSION_ID="7"
[2025-06-05 14:46:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:46:06] ANSI_COLOR="0;31"
[2025-06-05 14:46:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:46:06] HOME_URL="https://www.centos.org/"
[2025-06-05 14:46:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:46:06] 
[2025-06-05 14:46:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:46:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:46:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:46:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:46:06] 
[2025-06-05 14:46:06] 2025-06-05 18:45:52,857 | INFO     | **************************************
[2025-06-05 14:46:06] 2025-06-05 18:45:53,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 14:46:06] 2025-06-05 18:45:53,391 | INFO     | sufficient remaining disk space (96607404032 B)
[2025-06-05 14:46:06] 2025-06-05 18:45:53,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:46:06] 2025-06-05 18:45:53,392 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:46:06] 2025-06-05 18:45:53,392 | INFO     | update_server=False
[2025-06-05 14:46:06] 2025-06-05 18:45:53,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:46:06] 2025-06-05 18:45:53,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:46:06] 2025-06-05 18:45:53,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:46:06] 2025-06-05 18:45:53,394 | INFO     | aborting loop
[2025-06-05 14:46:06] 2025-06-05 18:45:53,616 | INFO     | all data control threads have been joined
[2025-06-05 14:46:06] 2025-06-05 18:45:53,746 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:46:06] 2025-06-05 18:45:53,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:46:06] 2025-06-05 18:45:53,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:46:06] 2025-06-05 18:45:54,322 | INFO     | all job control threads have been joined
[2025-06-05 14:46:06] 2025-06-05 18:45:54,399 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,400 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,541 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,599 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,601 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,622 | INFO     | [data] control thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,624 | INFO     | all payload control threads have been joined
[2025-06-05 14:46:06] 2025-06-05 18:45:54,761 | INFO     | [job] validate thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,763 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:54,922 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:55,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:55,328 | INFO     | [job] control thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:55,357 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:55,400 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:55,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:46:06] 2025-06-05 18:45:55,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:46:06] 2025-06-05 18:45:55,627 | INFO     | [payload] control thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:56,521 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:45:59,470 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:46:06] 2025-06-05 18:46:01,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395417515840)>', '<ExcThread(monitor, started 140395048572672)>']
[2025-06-05 14:46:06] 2025-06-05 18:46:01,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:46:06] 2025-06-05 18:46:01,787 | INFO     | [monitor] control thread has ended
[2025-06-05 14:46:06] 2025-06-05 18:46:06,175 | INFO     | all workflow threads have been joined
[2025-06-05 14:46:06] 2025-06-05 18:46:06,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:46:06] 2025-06-05 18:46:06,177 | INFO     | traces error code: 0
[2025-06-05 14:46:06] 2025-06-05 18:46:06,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:46:06] 2025-06-05 18:46:06,446 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:46:06] 2025-06-05 18:46:06,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:46:06] 2025-06-05 18:46:06,457 [wrapper] pilotpid: 1310908
[2025-06-05 14:46:06] 2025-06-05 18:46:06,463 [wrapper] Pilot exit status: 0
[2025-06-05 14:46:06] 2025-06-05 18:46:06,484 [wrapper] pandaids: 6668233186
[2025-06-05 14:46:06] 2025-06-05 18:46:06,656 [wrapper] cleanup supervisor_pilot 2063274 1310909
[2025-06-05 14:46:06] 2025-06-05 18:46:06,663 [wrapper] Test setup, not cleaning
[2025-06-05 14:46:06] 2025-06-05 18:46:06,670 [wrapper] apfmon messages muted
[2025-06-05 14:46:06] 2025-06-05 18:46:06,675 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:46:06] 2025-06-05 18:46:06,680 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:46:06]  *** Error codes and diagnostics ***
[2025-06-05 14:46:06]     "exeErrorCode": 0,
[2025-06-05 14:46:06]     "exeErrorDiag": "",
[2025-06-05 14:46:06]     "pilotErrorCode": 0,
[2025-06-05 14:46:06]     "pilotErrorDiag": "",
[2025-06-05 14:46:06]  *** Listing of results directory ***
[2025-06-05 14:46:06] total 417760
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas      5111 May 28 04:40 queuedata.json
[2025-06-05 14:46:06] -rwx------. 1 boincer umatlas     37140 May 28 04:41 runpilot2-wrapper.sh
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas       100 Jun  5 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:46:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 10:40 run_atlas
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas       105 Jun  5 10:40 job.xml
[2025-06-05 14:46:06] -rw-r--r--. 2 boincer umatlas 225201707 Jun  5 10:40 EVNT.44871834._003183.pool.root.1
[2025-06-05 14:46:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 10:40 start_atlas.sh
[2025-06-05 14:46:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 10:40 shared
[2025-06-05 14:46:06] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 10:40 input.tar.gz
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas         0 Jun  5 10:40 boinc_lockfile
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 10:40 pandaJob.out
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas    986745 Jun  5 10:41 agis_schedconf.cvmfs.json
[2025-06-05 14:46:06] drwx------. 4 boincer umatlas      4096 Jun  5 10:41 pilot3
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas      6860 Jun  5 14:37 init_data.xml
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas 195351078 Jun  5 14:44 HITS.44871837._081519.pool.root.1
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas       531 Jun  5 14:44 boinc_task_state.xml
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas      1045 Jun  5 14:45 memory_monitor_summary.json
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas   1598969 Jun  5 14:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas    406264 Jun  5 14:45 log.44871837._081519.job.log.tgz.1
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas        95 Jun  5 14:45 pilot_heartbeat.json
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas      7737 Jun  5 14:45 heartbeat.json
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 14:46 boinc_mmap_file
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas        29 Jun  5 14:46 wrapper_checkpoint.txt
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas      4353 Jun  5 14:46 pilotlog.txt
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas   1296609 Jun  5 14:46 log.44871837._081519.job.log.1
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas       357 Jun  5 14:46 output.list
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas       620 Jun  5 14:46 runtime_log
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas   1720320 Jun  5 14:46 result.tar.gz
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas      8670 Jun  5 14:46 runtime_log.err
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas       657 Jun  5 14:46 RDEMDmeWRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBhbKDmhphjsm.diag
[2025-06-05 14:46:06] -rw-r--r--. 1 boincer umatlas     20826 Jun  5 14:46 stderr.txt
[2025-06-05 14:46:06] HITS file was successfully produced:
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas 195351078 Jun  5 14:44 shared/HITS.pool.root.1
[2025-06-05 14:46:06]  *** Contents of shared directory: ***
[2025-06-05 14:46:06] total 412900
[2025-06-05 14:46:06] -rw-r--r--. 2 boincer umatlas 225201707 Jun  5 10:40 ATLAS.root_0
[2025-06-05 14:46:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 10:40 start_atlas.sh
[2025-06-05 14:46:06] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 10:40 input.tar.gz
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas 195351078 Jun  5 14:44 HITS.pool.root.1
[2025-06-05 14:46:06] -rw-------. 1 boincer umatlas   1720320 Jun  5 14:46 result.tar.gz
14:46:08 (1306914): run_atlas exited; CPU time 111064.331835
14:46:08 (1306914): called boinc_finish(0)

</stderr_txt>
]]>

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