Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:19:44 (2748504): wrapper (7.7.26015): starting
10:19:44 (2748504): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 10:19:44] Arguments: --nthreads 12
[2025-06-05 10:19:44] Threads: 12
[2025-06-05 10:19:44] Checking for CVMFS
[2025-06-05 10:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:19:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:19:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:19:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:19:45] 2.12.6.0 5616 2372 154372 146822 2 59 24307372 32935936 12205 16776704 0 8930392 99.552 7783786 34149 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 10:19:45] CVMFS is ok
[2025-06-05 10:19:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:19:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:19:45] Further information can be found at the LHC@home message board.
[2025-06-05 10:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:19:45] Checking for apptainer binary...
[2025-06-05 10:19:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:19:45] Running /usr/bin/apptainer --version
[2025-06-05 10:19:45] apptainer version 1.4.1-1.el9
[2025-06-05 10:19:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:19:45] c6-1-24-1.aglt2.org
[2025-06-05 10:19:45] apptainer works
[2025-06-05 10:19:45] Set ATHENA_PROC_NUMBER=12
[2025-06-05 10:19:45] Set ATHENA_CORE_NUMBER=12
[2025-06-05 10:19:45] Starting ATLAS job with PandaID=6668862571
[2025-06-05 10:19:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:26:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:26:21] 2025-06-05 16:25:58,917 | INFO     | total number of processed events: 400 (read)
[2025-06-05 12:26:21] 2025-06-05 16:25:58,932 | INFO     | executing command: lscpu
[2025-06-05 12:26:21] 2025-06-05 16:25:58,999 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 12:26:21] 2025-06-05 16:26:00,535 | INFO     | PID=2752225 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 12:26:21] 2025-06-05 16:26:00,536 | INFO     | .. there are 15 such processes running
[2025-06-05 12:26:21] 2025-06-05 16:26:00,793 | INFO     | monitor loop #507: job 0:6668862571 is in state 'finished'
[2025-06-05 12:26:21] 2025-06-05 16:26:00,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,497 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 12:26:21] 2025-06-05 16:26:02,497 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668862571/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,498 | INFO     | extracted standard info from prmon json
[2025-06-05 12:26:21] 2025-06-05 16:26:02,498 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:26:21] 2025-06-05 16:26:02,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:26:21] 2025-06-05 16:26:02,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:26:21] 2025-06-05 16:26:02,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:26:21] 2025-06-05 16:26:02,501 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:26:21] 2025-06-05 16:26:02,501 | INFO     | sum of square deviations: 591146016.7338698
[2025-06-05 12:26:21] 2025-06-05 16:26:02,502 | INFO     | sum of deviations: -10302749551.080647
[2025-06-05 12:26:21] 2025-06-05 16:26:02,502 | INFO     | mean x: 1749136972.685484
[2025-06-05 12:26:21] 2025-06-05 16:26:02,502 | INFO     | mean y: 2464123.1774193547
[2025-06-05 12:26:21] 2025-06-05 16:26:02,502 | INFO     | -- intersect: 30487183042.00054
[2025-06-05 12:26:21] 2025-06-05 16:26:02,502 | INFO     | intersect: 30487183042.00054
[2025-06-05 12:26:21] 2025-06-05 16:26:02,502 | INFO     | chi2: 1.74218143833696
[2025-06-05 12:26:21] 2025-06-05 16:26:02,503 | INFO     | sum of square deviations: 522481976.55462193
[2025-06-05 12:26:21] 2025-06-05 16:26:02,503 | INFO     | sum of deviations: -8219892352.168064
[2025-06-05 12:26:21] 2025-06-05 16:26:02,503 | INFO     | mean x: 1749136820.1932774
[2025-06-05 12:26:21] 2025-06-05 16:26:02,503 | INFO     | mean y: 2468716.7899159663
[2025-06-05 12:26:21] 2025-06-05 16:26:02,503 | INFO     | -- intersect: 27520578462.914707
[2025-06-05 12:26:21] 2025-06-05 16:26:02,503 | INFO     | intersect: 27520578462.914707
[2025-06-05 12:26:21] 2025-06-05 16:26:02,504 | INFO     | chi2: 1.7423301105846616
[2025-06-05 12:26:21] 2025-06-05 16:26:02,504 | INFO     | current chi2=1.7423301105846616 (change=-0.008533683371317564 %)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,504 | INFO     | right removable region: 118
[2025-06-05 12:26:21] 2025-06-05 16:26:02,504 | INFO     | sum of square deviations: 522467946.55462193
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | sum of deviations: -29170084810.504192
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | mean x: 1749137125.1932774
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | mean y: 2505335.369747899
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | -- intersect: 97659172358.77957
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | intersect: 97659172358.77957
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | chi2: 0.2101919722237498
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | current chi2=0.2101919722237498 (change=87.93512732953961 %)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,505 | INFO     | sum of square deviations: 459324863.859649
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | sum of deviations: -27311699201.05263
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | mean x: 1749137277.7017543
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | mean y: 2500665.263157895
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | -- intersect: 104007127779.32143
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | intersect: 104007127779.32143
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | chi2: 0.17660891456515224
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | current chi2=0.17660891456515224 (change=15.97732649030398 %)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | left removable region: 20
[2025-06-05 12:26:21] 2025-06-05 16:26:02,506 | INFO     | sum of square deviations: 291789764.41836786
[2025-06-05 12:26:21] 2025-06-05 16:26:02,507 | INFO     | sum of deviations: -15853091245.37755
[2025-06-05 12:26:21] 2025-06-05 16:26:02,507 | INFO     | mean x: 1749137399.7040815
[2025-06-05 12:26:21] 2025-06-05 16:26:02,507 | INFO     | mean y: 2481245.1938775512
[2025-06-05 12:26:21] 2025-06-05 16:26:02,507 | INFO     | -- intersect: 95034035396.80928
[2025-06-05 12:26:21] 2025-06-05 16:26:02,507 | INFO     | intersect: 95034035396.80928
[2025-06-05 12:26:21] 2025-06-05 16:26:02,507 | INFO     | chi2: 0.15585283344284084
[2025-06-05 12:26:21] 2025-06-05 16:26:02,507 | INFO     | -- intersect: 95034035396.80928
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | current memory leak: -54.33 B/s (using 98 data points, chi2=0.16)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | ..............................
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | . Timing measurements:
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | . get job = 0 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | . initial setup = 2 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | . payload setup = 6 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | . stage-in = 0 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | . payload execution = 7535 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,508 | INFO     | . stage-out = 0 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,509 | INFO     | . log creation = 0 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,509 | INFO     | ..............................
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | 
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | job summary report
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | --------------------------------------------------
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | PanDA job id: 6668862571
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | task id: 44871837
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | errors: (none)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | pilot state: finished 
[2025-06-05 12:26:21] 2025-06-05 16:26:02,591 | INFO     | transexitcode: 0
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | exeerrorcode: 0
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | exeerrordiag: 
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | exitcode: 0
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | exitmsg: OK
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | cpuconsumptiontime: 47487 s
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | nevents: 400
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | neventsw: 0
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | pid: 2759609
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | pgrp: 2759609
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | corecount: 12
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | event service: False
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 7545: 2425166, 7546: 2434107, 7548: 2434163, 7552: 2434461}
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | --------------------------------------------------
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | 
[2025-06-05 12:26:21] 2025-06-05 16:26:02,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 12:26:21] 2025-06-05 16:26:02,611 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:26:21] 2025-06-05 16:26:02,613 | INFO     | job 6668862571 has completed (purged errors)
[2025-06-05 12:26:21] 2025-06-05 16:26:02,614 | INFO     | overall cleanup function is called
[2025-06-05 12:26:21] 2025-06-05 16:26:03,622 | INFO     | --- collectZombieJob: --- 10, [2759609]
[2025-06-05 12:26:21] 2025-06-05 16:26:03,622 | INFO     | zombie collector waiting for pid 2759609
[2025-06-05 12:26:21] 2025-06-05 16:26:03,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:26:21] 2025-06-05 16:26:03,623 | INFO     | collected zombie processes
[2025-06-05 12:26:21] 2025-06-05 16:26:03,623 | INFO     | will attempt to kill all subprocesses of pid=2759609
[2025-06-05 12:26:21] 2025-06-05 16:26:03,853 | INFO     | process IDs to be killed: [2759609] (in reverse order)
[2025-06-05 12:26:21] 2025-06-05 16:26:03,932 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:26:21] 2025-06-05 16:26:03,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:26:21] 2025-06-05 16:26:03,941 | INFO     | did not find any defunct processes belonging to 2759609
[2025-06-05 12:26:21] 2025-06-05 16:26:03,948 | INFO     | did not find any defunct processes belonging to 2759609
[2025-06-05 12:26:21] 2025-06-05 16:26:03,949 | INFO     | ready for new job
[2025-06-05 12:26:21] 2025-06-05 16:26:03,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:26:21] 2025-06-05 16:26:03,950 | INFO     | **************************************
[2025-06-05 12:26:21] 2025-06-05 16:26:03,950 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:26:21] 2025-06-05 16:26:03,950 | INFO     | **************************************
[2025-06-05 12:26:21] 2025-06-05 16:26:03,950 | INFO     | 
[2025-06-05 12:26:21] 2025-06-05 16:26:03,966 | INFO     | architecture information:
[2025-06-05 12:26:21] 2025-06-05 16:26:03,967 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:26:21] 2025-06-05 16:26:03,981 | INFO     | cat /etc/os-release:
[2025-06-05 12:26:21] NAME="CentOS Linux"
[2025-06-05 12:26:21] VERSION="7 (Core)"
[2025-06-05 12:26:21] ID="centos"
[2025-06-05 12:26:21] ID_LIKE="rhel fedora"
[2025-06-05 12:26:21] VERSION_ID="7"
[2025-06-05 12:26:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:26:21] ANSI_COLOR="0;31"
[2025-06-05 12:26:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:26:21] HOME_URL="https://www.centos.org/"
[2025-06-05 12:26:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:26:21] 
[2025-06-05 12:26:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:26:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:26:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:26:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:26:21] 
[2025-06-05 12:26:21] 2025-06-05 16:26:03,982 | INFO     | **************************************
[2025-06-05 12:26:21] 2025-06-05 16:26:04,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 12:26:21] 2025-06-05 16:26:04,498 | INFO     | sufficient remaining disk space (76470550528 B)
[2025-06-05 12:26:21] 2025-06-05 16:26:04,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:26:21] 2025-06-05 16:26:04,498 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:26:21] 2025-06-05 16:26:04,498 | INFO     | update_server=False
[2025-06-05 12:26:21] 2025-06-05 16:26:04,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:26:21] 2025-06-05 16:26:04,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:26:21] 2025-06-05 16:26:04,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:26:21] 2025-06-05 16:26:04,499 | INFO     | aborting loop
[2025-06-05 12:26:21] 2025-06-05 16:26:04,552 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:26:21] 2025-06-05 16:26:04,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:26:21] 2025-06-05 16:26:04,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:26:21] 2025-06-05 16:26:04,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:26:21] 2025-06-05 16:26:04,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:26:21] 2025-06-05 16:26:04,881 | INFO     | all data control threads have been joined
[2025-06-05 12:26:21] 2025-06-05 16:26:04,947 | INFO     | all payload control threads have been joined
[2025-06-05 12:26:21] 2025-06-05 16:26:05,004 | INFO     | all job control threads have been joined
[2025-06-05 12:26:21] 2025-06-05 16:26:05,503 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:05,504 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:05,504 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:05,556 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:05,723 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:05,886 | INFO     | [data] control thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:05,952 | INFO     | [payload] control thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:06,009 | INFO     | [job] control thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:06,508 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:06,636 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:06,876 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:06,908 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:06,978 | INFO     | [job] validate thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:07,002 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:08,676 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:15,544 | INFO     | job.realtimelogging is not enabled
[2025-06-05 12:26:21] 2025-06-05 16:26:16,550 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:26:21] 2025-06-05 16:26:16,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485921834816)>', '<ExcThread(monitor, started 140485133846272)>']
[2025-06-05 12:26:21] 2025-06-05 16:26:16,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:26:21] 2025-06-05 16:26:16,613 | INFO     | [monitor] control thread has ended
[2025-06-05 12:26:21] 2025-06-05 16:26:21,627 | INFO     | all workflow threads have been joined
[2025-06-05 12:26:21] 2025-06-05 16:26:21,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:26:21] 2025-06-05 16:26:21,628 | INFO     | traces error code: 0
[2025-06-05 12:26:21] 2025-06-05 16:26:21,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:26:21] 2025-06-05 16:26:21,767 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:26:21] 2025-06-05 16:26:21,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:26:21] 2025-06-05 16:26:21,772 [wrapper] pilotpid: 2752225
[2025-06-05 12:26:21] 2025-06-05 16:26:21,775 [wrapper] Pilot exit status: 0
[2025-06-05 12:26:21] 2025-06-05 16:26:21,784 [wrapper] pandaids: 6668862571
[2025-06-05 12:26:21] 2025-06-05 16:26:21,834 [wrapper] cleanup supervisor_pilot 3042538 2752226
[2025-06-05 12:26:21] 2025-06-05 16:26:21,836 [wrapper] Test setup, not cleaning
[2025-06-05 12:26:21] 2025-06-05 16:26:21,839 [wrapper] apfmon messages muted
[2025-06-05 12:26:21] 2025-06-05 16:26:21,841 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:26:21] 2025-06-05 16:26:21,843 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:26:21]  *** Error codes and diagnostics ***
[2025-06-05 12:26:21]     "exeErrorCode": 0,
[2025-06-05 12:26:21]     "exeErrorDiag": "",
[2025-06-05 12:26:21]     "pilotErrorCode": 0,
[2025-06-05 12:26:21]     "pilotErrorDiag": "",
[2025-06-05 12:26:21]  *** Listing of results directory ***
[2025-06-05 12:26:21] total 421412
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas    495897 May 28 15:15 pilot3.tar.gz
[2025-06-05 12:26:21] -rwx------. 1 boincer umatlas     37140 May 28 15:46 runpilot2-wrapper.sh
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas      5111 May 28 15:46 queuedata.json
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas       100 Jun  5 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:26:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 10:19 run_atlas
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas       105 Jun  5 10:19 job.xml
[2025-06-05 12:26:21] -rw-r--r--. 2 boincer umatlas 227523270 Jun  5 10:19 EVNT.44871834._003482.pool.root.1
[2025-06-05 12:26:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 10:19 start_atlas.sh
[2025-06-05 12:26:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 10:19 shared
[2025-06-05 12:26:21] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 10:19 input.tar.gz
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas         0 Jun  5 10:19 boinc_lockfile
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 10:19 pandaJob.out
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas    983210 Jun  5 10:19 agis_schedconf.cvmfs.json
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas   1598969 Jun  5 10:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:26:21] drwx------. 4 boincer umatlas      4096 Jun  5 10:19 pilot3
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas      6840 Jun  5 12:22 init_data.xml
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas 198013980 Jun  5 12:25 HITS.44871837._089503.pool.root.1
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas        95 Jun  5 12:25 pilot_heartbeat.json
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas       529 Jun  5 12:25 boinc_task_state.xml
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas      1042 Jun  5 12:25 memory_monitor_summary.json
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas    398336 Jun  5 12:25 log.44871837._089503.job.log.tgz.1
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas      7720 Jun  5 12:26 heartbeat.json
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 12:26 boinc_mmap_file
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas      4425 Jun  5 12:26 pilotlog.txt
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas        27 Jun  5 12:26 wrapper_checkpoint.txt
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas    681824 Jun  5 12:26 log.44871837._089503.job.log.1
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas       357 Jun  5 12:26 output.list
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas       620 Jun  5 12:26 runtime_log
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas   1095680 Jun  5 12:26 result.tar.gz
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas       654 Jun  5 12:26 VFaLDmyube7n9Rq4apOajLDm4fhM0noT9bVof3QYDmm2TKDmvJCFZn.diag
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 12:26 runtime_log.err
[2025-06-05 12:26:21] -rw-r--r--. 1 boincer umatlas     21213 Jun  5 12:26 stderr.txt
[2025-06-05 12:26:21] HITS file was successfully produced:
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas 198013980 Jun  5 12:25 shared/HITS.pool.root.1
[2025-06-05 12:26:21]  *** Contents of shared directory: ***
[2025-06-05 12:26:21] total 417160
[2025-06-05 12:26:21] -rw-r--r--. 2 boincer umatlas 227523270 Jun  5 10:19 ATLAS.root_0
[2025-06-05 12:26:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 10:19 start_atlas.sh
[2025-06-05 12:26:21] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 10:19 input.tar.gz
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas 198013980 Jun  5 12:25 HITS.pool.root.1
[2025-06-05 12:26:21] -rw-------. 1 boincer umatlas   1095680 Jun  5 12:26 result.tar.gz
12:26:23 (2748504): run_atlas exited; CPU time 47651.377576
12:26:23 (2748504): called boinc_finish(0)

</stderr_txt>
]]>

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