Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:20:29 (550198): wrapper (7.7.26015): starting
10:20:29 (550198): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 10:20:29] Arguments: --nthreads 8
[2025-06-05 10:20:29] Threads: 8
[2025-06-05 10:20:29] Checking for CVMFS
[2025-06-05 10:20:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:20:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:20:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:20:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:20:29] 2.12.6.0 2939844 24799 501116 146822 1 203 40708122 40960001 9675 16776704 1 130199942 99.693 108926515 27931 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 10:20:29] CVMFS is ok
[2025-06-05 10:20:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:20:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:20:29] Further information can be found at the LHC@home message board.
[2025-06-05 10:20:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:20:29] Checking for apptainer binary...
[2025-06-05 10:20:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:20:29] Running /usr/bin/apptainer --version
[2025-06-05 10:20:29] apptainer version 1.4.1-1.el9
[2025-06-05 10:20:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:20:30] c7-11-15.aglt2.org
[2025-06-05 10:20:30] apptainer works
[2025-06-05 10:20:30] Set ATHENA_PROC_NUMBER=8
[2025-06-05 10:20:30] Set ATHENA_CORE_NUMBER=8
[2025-06-05 10:20:30] Starting ATLAS job with PandaID=6668686868
[2025-06-05 10:20:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:57:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:57:43]  storage_token=
[2025-06-05 11:57:43]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668686868/log.44871837._086261.job.log.tgz.1
[2025-06-05 11:57:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/ff/log.44871837._086261.job.log.tgz.1
[2025-06-05 11:57:43]  workdir=None
[2025-06-05 11:57:43] ]
[2025-06-05 11:57:43] 2025-06-05 15:57:17,818 | INFO     | transferring file log.44871837._086261.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668686868/log.44871837._086261.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 11:57:43] 2025-06-05 15:57:17,818 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668686868/log.44871837._086261.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._086261.job
[2025-06-05 11:57:43] 2025-06-05 15:57:17,835 | INFO     | adding to output.list: log.44871837._086261.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/ff/log.44871837._086261.job.log.tg
[2025-06-05 11:57:43] 2025-06-05 15:57:17,836 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 11:57:43] 2025-06-05 15:57:17,836 | INFO     | summary of transferred files:
[2025-06-05 11:57:43] 2025-06-05 15:57:17,836 | INFO     |  -- lfn=log.44871837._086261.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 11:57:43] 2025-06-05 15:57:17,837 | INFO     | stage-out finished correctly
[2025-06-05 11:57:43] 2025-06-05 15:57:19,379 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 11:57:43] 2025-06-05 15:57:20,159 | INFO     | PID=553786 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 11:57:43] 2025-06-05 15:57:20,159 | INFO     | .. there are 13 such processes running
[2025-06-05 11:57:43] 2025-06-05 15:57:20,492 | INFO     | job 6668686868 has state=finished
[2025-06-05 11:57:43] 2025-06-05 15:57:20,492 | INFO     | preparing for final server update for job 6668686868 in state='finished'
[2025-06-05 11:57:43] 2025-06-05 15:57:20,492 | INFO     | this job has now completed (state=finished)
[2025-06-05 11:57:43] 2025-06-05 15:57:20,492 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 11:57:43] 2025-06-05 15:57:20,493 | INFO     | log transfer has been attempted: DONE
[2025-06-05 11:57:43] 2025-06-05 15:57:20,493 | INFO     | job 6668686868 has finished - writing final server update
[2025-06-05 11:57:43] 2025-06-05 15:57:20,493 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:57:43] 2025-06-05 15:57:20,510 | INFO     | executing command: lscpu
[2025-06-05 11:57:43] 2025-06-05 15:57:20,589 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:57:43] 2025-06-05 15:57:23,572 | WARNING  | process 561578 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 11:57:43] 2025-06-05 15:57:23,572 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668686868/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:57:43] 2025-06-05 15:57:23,573 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668686868/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:57:43] 2025-06-05 15:57:23,574 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3698893 B
[2025-06-05 11:57:43] 2025-06-05 15:57:23,574 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15787 B
[2025-06-05 11:57:43] 2025-06-05 15:57:23,574 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 11:57:43] 2025-06-05 15:57:24,344 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:57:43] 2025-06-05 15:57:24,344 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668686868/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,344 | INFO     | extracted standard info from prmon json
[2025-06-05 11:57:43] 2025-06-05 15:57:24,350 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:57:43] 2025-06-05 15:57:24,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:57:43] 2025-06-05 15:57:24,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:57:43] 2025-06-05 15:57:24,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:57:43] 2025-06-05 15:57:24,354 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:57:43] 2025-06-05 15:57:24,354 | INFO     | sum of square deviations: 211285822.0
[2025-06-05 11:57:43] 2025-06-05 15:57:24,354 | INFO     | sum of deviations: -10384428696.0
[2025-06-05 11:57:43] 2025-06-05 15:57:24,354 | INFO     | mean x: 1749136224.5
[2025-06-05 11:57:43] 2025-06-05 15:57:24,355 | INFO     | mean y: 2309328.340909091
[2025-06-05 11:57:43] 2025-06-05 15:57:24,355 | INFO     | -- intersect: 85970124068.4653
[2025-06-05 11:57:43] 2025-06-05 15:57:24,355 | INFO     | intersect: 85970124068.4653
[2025-06-05 11:57:43] 2025-06-05 15:57:24,355 | INFO     | chi2: 0.07594708798848249
[2025-06-05 11:57:43] 2025-06-05 15:57:24,356 | INFO     | -- intersect: 85970124068.4653
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | current memory leak: -49.15 B/s (using 88 data points, chi2=0.08)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | ..............................
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | . Timing measurements:
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | . get job = 0 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | . initial setup = 2 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | . payload setup = 6 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | . stage-in = 0 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | . payload execution = 5772 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,357 | INFO     | . stage-out = 0 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,358 | INFO     | . log creation = 0 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,358 | INFO     | ..............................
[2025-06-05 11:57:43] 2025-06-05 15:57:24,384 | INFO     | sufficient remaining disk space (86248521728 B)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,400 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,441 | INFO     | 
[2025-06-05 11:57:43] 2025-06-05 15:57:24,441 | INFO     | job summary report
[2025-06-05 11:57:43] 2025-06-05 15:57:24,441 | INFO     | --------------------------------------------------
[2025-06-05 11:57:43] 2025-06-05 15:57:24,441 | INFO     | PanDA job id: 6668686868
[2025-06-05 11:57:43] 2025-06-05 15:57:24,441 | INFO     | task id: 44871837
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | errors: (none)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | pilot state: finished 
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | transexitcode: 0
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | exeerrorcode: 0
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | exeerrordiag: 
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | exitcode: 0
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | exitmsg: OK
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | cpuconsumptiontime: 41668 s
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | nevents: 400
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | neventsw: 0
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | pid: 561578
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | pgrp: 561578
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | corecount: 8
[2025-06-05 11:57:43] 2025-06-05 15:57:24,442 | INFO     | event service: False
[2025-06-05 11:57:43] 2025-06-05 15:57:24,443 | INFO     | sizes: {0: 2396512, 1: 2397368, 5: 2397574, 12: 2397630, 5782: 2424270, 5783: 2433211, 5784: 2433395, 5789: 2433565}
[2025-06-05 11:57:43] 2025-06-05 15:57:24,443 | INFO     | --------------------------------------------------
[2025-06-05 11:57:43] 2025-06-05 15:57:24,443 | INFO     | 
[2025-06-05 11:57:43] 2025-06-05 15:57:24,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 11:57:43] 2025-06-05 15:57:24,449 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6668686868: 4004969 B (within 2537553920 B limit)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,450 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6668686868/HITS.44871837._086261.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,450 | INFO     | total size of present files: 0 B (workdir size: 4004969 B)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,450 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6668686868/HITS.44871837._086261.pool.root.1 since it does not exist
[2025-06-05 11:57:43] 2025-06-05 15:57:24,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:57:43] 2025-06-05 15:57:24,467 | INFO     | job 6668686868 has completed (purged errors)
[2025-06-05 11:57:43] 2025-06-05 15:57:24,467 | INFO     | overall cleanup function is called
[2025-06-05 11:57:43] 2025-06-05 15:57:24,682 | INFO     | number of running child processes to parent process 561578: 1
[2025-06-05 11:57:43] 2025-06-05 15:57:24,683 | INFO     | maximum number of monitored processes: 6
[2025-06-05 11:57:43] 2025-06-05 15:57:24,683 | INFO     | aborting job monitoring since job object (job id=6668686868) has expired
[2025-06-05 11:57:43] 2025-06-05 15:57:25,476 | INFO     | --- collectZombieJob: --- 10, [561578]
[2025-06-05 11:57:43] 2025-06-05 15:57:25,476 | INFO     | zombie collector waiting for pid 561578
[2025-06-05 11:57:43] 2025-06-05 15:57:25,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:57:43] 2025-06-05 15:57:25,477 | INFO     | collected zombie processes
[2025-06-05 11:57:43] 2025-06-05 15:57:25,477 | INFO     | will attempt to kill all subprocesses of pid=561578
[2025-06-05 11:57:43] 2025-06-05 15:57:25,738 | INFO     | process IDs to be killed: [561578] (in reverse order)
[2025-06-05 11:57:43] 2025-06-05 15:57:25,844 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:57:43] 2025-06-05 15:57:25,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:57:43] 2025-06-05 15:57:25,857 | INFO     | did not find any defunct processes belonging to 561578
[2025-06-05 11:57:43] 2025-06-05 15:57:25,870 | INFO     | did not find any defunct processes belonging to 561578
[2025-06-05 11:57:43] 2025-06-05 15:57:25,870 | INFO     | ready for new job
[2025-06-05 11:57:43] 2025-06-05 15:57:25,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:57:43] 2025-06-05 15:57:25,872 | INFO     | **************************************
[2025-06-05 11:57:43] 2025-06-05 15:57:25,872 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:57:43] 2025-06-05 15:57:25,872 | INFO     | **************************************
[2025-06-05 11:57:43] 2025-06-05 15:57:25,872 | INFO     | 
[2025-06-05 11:57:43] 2025-06-05 15:57:25,887 | INFO     | architecture information:
[2025-06-05 11:57:43] 2025-06-05 15:57:25,888 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:57:43] 2025-06-05 15:57:25,902 | INFO     | cat /etc/os-release:
[2025-06-05 11:57:43] NAME="CentOS Linux"
[2025-06-05 11:57:43] VERSION="7 (Core)"
[2025-06-05 11:57:43] ID="centos"
[2025-06-05 11:57:43] ID_LIKE="rhel fedora"
[2025-06-05 11:57:43] VERSION_ID="7"
[2025-06-05 11:57:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:57:43] ANSI_COLOR="0;31"
[2025-06-05 11:57:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:57:43] HOME_URL="https://www.centos.org/"
[2025-06-05 11:57:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:57:43] 
[2025-06-05 11:57:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:57:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:57:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:57:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:57:43] 
[2025-06-05 11:57:43] 2025-06-05 15:57:25,902 | INFO     | **************************************
[2025-06-05 11:57:43] 2025-06-05 15:57:26,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 11:57:43] 2025-06-05 15:57:26,423 | INFO     | sufficient remaining disk space (86252716032 B)
[2025-06-05 11:57:43] 2025-06-05 15:57:26,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:57:43] 2025-06-05 15:57:26,424 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:57:43] 2025-06-05 15:57:26,424 | INFO     | update_server=False
[2025-06-05 11:57:43] 2025-06-05 15:57:26,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:57:43] 2025-06-05 15:57:26,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:57:43] 2025-06-05 15:57:26,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:57:43] 2025-06-05 15:57:26,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:57:43] 2025-06-05 15:57:26,425 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 11:57:43] 2025-06-05 15:57:26,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:57:43] 2025-06-05 15:57:26,426 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:57:43] 2025-06-05 15:57:26,426 | INFO     | aborting loop
[2025-06-05 11:57:43] 2025-06-05 15:57:26,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:57:43] 2025-06-05 15:57:26,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:57:43] 2025-06-05 15:57:26,850 | INFO     | all payload control threads have been joined
[2025-06-05 11:57:43] 2025-06-05 15:57:27,248 | INFO     | all data control threads have been joined
[2025-06-05 11:57:43] 2025-06-05 15:57:27,429 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:27,430 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:27,431 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:27,609 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:27,786 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:27,822 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:27,851 | INFO     | all job control threads have been joined
[2025-06-05 11:57:43] 2025-06-05 15:57:27,858 | INFO     | [payload] control thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:27,863 | INFO     | [job] validate thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:28,098 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:28,146 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:28,253 | INFO     | [data] control thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:28,434 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:28,609 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:28,856 | INFO     | [job] control thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:30,433 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:36,771 | INFO     | job.realtimelogging is not enabled
[2025-06-05 11:57:43] 2025-06-05 15:57:37,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:57:43] 2025-06-05 15:57:38,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651372631872)>', '<ExcThread(monitor, started 140651010172672)>']
[2025-06-05 11:57:43] 2025-06-05 15:57:38,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:57:43] 2025-06-05 15:57:38,481 | INFO     | [monitor] control thread has ended
[2025-06-05 11:57:43] 2025-06-05 15:57:43,301 | INFO     | all workflow threads have been joined
[2025-06-05 11:57:43] 2025-06-05 15:57:43,301 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:57:43] 2025-06-05 15:57:43,301 | INFO     | traces error code: 0
[2025-06-05 11:57:43] 2025-06-05 15:57:43,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:57:43] 2025-06-05 15:57:43,406 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:57:43] 2025-06-05 15:57:43,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:57:43] 2025-06-05 15:57:43,410 [wrapper] pilotpid: 553786
[2025-06-05 11:57:43] 2025-06-05 15:57:43,411 [wrapper] Pilot exit status: 0
[2025-06-05 11:57:43] 2025-06-05 15:57:43,420 [wrapper] pandaids: 6668686868
[2025-06-05 11:57:43] 2025-06-05 15:57:43,478 [wrapper] cleanup supervisor_pilot  875473 553787
[2025-06-05 11:57:43] 2025-06-05 15:57:43,480 [wrapper] Test setup, not cleaning
[2025-06-05 11:57:43] 2025-06-05 15:57:43,483 [wrapper] apfmon messages muted
[2025-06-05 11:57:43] 2025-06-05 15:57:43,485 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:57:43] 2025-06-05 15:57:43,487 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:57:43]  *** Error codes and diagnostics ***
[2025-06-05 11:57:43]     "exeErrorCode": 0,
[2025-06-05 11:57:43]     "exeErrorDiag": "",
[2025-06-05 11:57:43]     "pilotErrorCode": 0,
[2025-06-05 11:57:43]     "pilotErrorDiag": "",
[2025-06-05 11:57:43]  *** Listing of results directory ***
[2025-06-05 11:57:43] total 421336
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas      5111 May 28 11:20 queuedata.json
[2025-06-05 11:57:43] -rwx------. 1 boincer umatlas     37140 May 28 11:20 runpilot2-wrapper.sh
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas       100 Jun  5 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:57:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 10:20 run_atlas
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas       105 Jun  5 10:20 job.xml
[2025-06-05 11:57:43] -rw-r--r--. 2 boincer umatlas 225574099 Jun  5 10:20 EVNT.44871834._000894.pool.root.1
[2025-06-05 11:57:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 10:20 start_atlas.sh
[2025-06-05 11:57:43] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 10:20 shared
[2025-06-05 11:57:43] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 10:20 input.tar.gz
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas         0 Jun  5 10:20 boinc_lockfile
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 10:20 pandaJob.out
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas    983210 Jun  5 10:20 agis_schedconf.cvmfs.json
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas   1598969 Jun  5 10:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:57:43] drwx------. 4 boincer umatlas      4096 Jun  5 10:20 pilot3
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 11:55 init_data.xml
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas        95 Jun  5 11:56 pilot_heartbeat.json
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas       529 Jun  5 11:56 boinc_task_state.xml
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas 200261560 Jun  5 11:56 HITS.44871837._086261.pool.root.1
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas      1028 Jun  5 11:57 memory_monitor_summary.json
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas    328887 Jun  5 11:57 log.44871837._086261.job.log.tgz.1
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 11:57 boinc_mmap_file
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas        27 Jun  5 11:57 wrapper_checkpoint.txt
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas      7688 Jun  5 11:57 heartbeat.json
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas      4548 Jun  5 11:57 pilotlog.txt
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas    562088 Jun  5 11:57 log.44871837._086261.job.log.1
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas       357 Jun  5 11:57 output.list
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas       620 Jun  5 11:57 runtime_log
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas    911360 Jun  5 11:57 result.tar.gz
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 11:57 runtime_log.err
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas       652 Jun  5 11:57 3lxKDmElXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4PcKDmJ4pNHm.diag
[2025-06-05 11:57:43] -rw-r--r--. 1 boincer umatlas     22465 Jun  5 11:57 stderr.txt
[2025-06-05 11:57:43] HITS file was successfully produced:
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas 200261560 Jun  5 11:56 shared/HITS.pool.root.1
[2025-06-05 11:57:43]  *** Contents of shared directory: ***
[2025-06-05 11:57:43] total 417268
[2025-06-05 11:57:43] -rw-r--r--. 2 boincer umatlas 225574099 Jun  5 10:20 ATLAS.root_0
[2025-06-05 11:57:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 10:20 start_atlas.sh
[2025-06-05 11:57:43] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 10:20 input.tar.gz
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas 200261560 Jun  5 11:56 HITS.pool.root.1
[2025-06-05 11:57:43] -rw-------. 1 boincer umatlas    911360 Jun  5 11:57 result.tar.gz
11:57:45 (550198): run_atlas exited; CPU time 41724.738020
11:57:45 (550198): called boinc_finish(0)

</stderr_txt>
]]>

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