Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:18:25 (8781): wrapper (7.7.26015): starting
10:18:25 (8781): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 10:18:25] Arguments: --nthreads 10
[2025-06-05 10:18:25] Threads: 10
[2025-06-05 10:18:25] Checking for CVMFS
[2025-06-05 10:18:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:18:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:18:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:18:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:18:28] 2.11.2.0 21479 70508 445520 146822 1 20 18236935 18432000 11038 130560 0 111632493 98.646 325860551 36563 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 10:18:28] CVMFS is ok
[2025-06-05 10:18:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:18:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:18:28] Further information can be found at the LHC@home message board.
[2025-06-05 10:18:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:18:28] Checking for apptainer binary...
[2025-06-05 10:18:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:18:28] Running /usr/bin/apptainer --version
[2025-06-05 10:18:28] apptainer version 1.3.2-1.el7
[2025-06-05 10:18:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:18:47] c-211-24.aglt2.org
[2025-06-05 10:18:47] apptainer works
[2025-06-05 10:18:47] Set ATHENA_PROC_NUMBER=10
[2025-06-05 10:18:47] Set ATHENA_CORE_NUMBER=10
[2025-06-05 10:18:47] Starting ATLAS job with PandaID=6667923948
[2025-06-05 10:18:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:19:07]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:19:07] 2025-06-06 04:18:48,338 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 00:19:07] 2025-06-06 04:18:48,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 00:19:07] 2025-06-06 04:18:48,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 00:19:07] 2025-06-06 04:18:48,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 00:19:07] 2025-06-06 04:18:48,397 | INFO     | fitting pss+swap vs Time
[2025-06-06 00:19:07] 2025-06-06 04:18:48,398 | INFO     | sum of square deviations: 170966295321.04816
[2025-06-06 00:19:07] 2025-06-06 04:18:48,438 | INFO     | sum of deviations: 955127238305.9097
[2025-06-06 00:19:07] 2025-06-06 04:18:48,438 | INFO     | mean x: 1749158437.2207317
[2025-06-06 00:19:07] 2025-06-06 04:18:48,439 | INFO     | mean y: 2530451.287804878
[2025-06-06 00:19:07] 2025-06-06 04:18:48,439 | INFO     | -- intersect: -9769389004.32689
[2025-06-06 00:19:07] 2025-06-06 04:18:48,439 | INFO     | intersect: -9769389004.32689
[2025-06-06 00:19:07] 2025-06-06 04:18:48,444 | INFO     | chi2: 7.333295043952459
[2025-06-06 00:19:07] 2025-06-06 04:18:48,446 | INFO     | sum of square deviations: 167858007988.4346
[2025-06-06 00:19:07] 2025-06-06 04:18:48,482 | INFO     | sum of deviations: 1007568975102.218
[2025-06-06 00:19:07] 2025-06-06 04:18:48,482 | INFO     | mean x: 1749158284.7251534
[2025-06-06 00:19:07] 2025-06-06 04:18:48,482 | INFO     | mean y: 2533009.652760736
[2025-06-06 00:19:07] 2025-06-06 04:18:48,482 | INFO     | -- intersect: -10496802955.024632
[2025-06-06 00:19:07] 2025-06-06 04:18:48,483 | INFO     | intersect: -10496802955.024632
[2025-06-06 00:19:07] 2025-06-06 04:18:48,484 | INFO     | chi2: 6.477496784525957
[2025-06-06 00:19:07] 2025-06-06 04:18:48,490 | INFO     | current chi2=6.477496784525957 (change=11.670037197429453 %)
[2025-06-06 00:19:07] 2025-06-06 04:18:48,490 | INFO     | right removable region: 814
[2025-06-06 00:19:07] 2025-06-06 04:18:48,492 | INFO     | sum of square deviations: 167857647478.4348
[2025-06-06 00:19:07] 2025-06-06 04:18:48,557 | INFO     | sum of deviations: 664976858474.0485
[2025-06-06 00:19:07] 2025-06-06 04:18:48,557 | INFO     | mean x: 1749158589.7251534
[2025-06-06 00:19:07] 2025-06-06 04:18:48,557 | INFO     | mean y: 2544681.607361963
[2025-06-06 00:19:07] 2025-06-06 04:18:48,558 | INFO     | -- intersect: -6926838646.714113
[2025-06-06 00:19:07] 2025-06-06 04:18:48,558 | INFO     | intersect: -6926838646.714113
[2025-06-06 00:19:07] 2025-06-06 04:18:48,563 | INFO     | chi2: 2.992594425471432
[2025-06-06 00:19:07] 2025-06-06 04:18:48,564 | INFO     | current chi2=2.992594425471432 (change=59.191681126489904 %)
[2025-06-06 00:19:07] 2025-06-06 04:18:48,565 | INFO     | sum of square deviations: 164786907323.2915
[2025-06-06 00:19:07] 2025-06-06 04:18:48,615 | INFO     | sum of deviations: 492703196369.0074
[2025-06-06 00:19:07] 2025-06-06 04:18:48,616 | INFO     | mean x: 1749158742.2296295
[2025-06-06 00:19:07] 2025-06-06 04:18:48,616 | INFO     | mean y: 2553228.5913580246
[2025-06-06 00:19:07] 2025-06-06 04:18:48,616 | INFO     | -- intersect: -5227328909.815152
[2025-06-06 00:19:07] 2025-06-06 04:18:48,616 | INFO     | intersect: -5227328909.815152
[2025-06-06 00:19:07] 2025-06-06 04:18:48,617 | INFO     | chi2: 1.4265470509776619
[2025-06-06 00:19:07] 2025-06-06 04:18:48,618 | INFO     | current chi2=1.4265470509776619 (change=52.33075892825223 %)
[2025-06-06 00:19:07] 2025-06-06 04:18:48,627 | INFO     | sum of square deviations: 161754039566.96417
[2025-06-06 00:19:07] 2025-06-06 04:18:48,675 | INFO     | sum of deviations: 423221911985.9376
[2025-06-06 00:19:07] 2025-06-06 04:18:48,675 | INFO     | mean x: 1749158894.7291925
[2025-06-06 00:19:07] 2025-06-06 04:18:48,676 | INFO     | mean y: 2556720.9813664597
[2025-06-06 00:19:07] 2025-06-06 04:18:48,676 | INFO     | -- intersect: -4574036072.474221
[2025-06-06 00:19:07] 2025-06-06 04:18:48,676 | INFO     | intersect: -4574036072.474221
[2025-06-06 00:19:07] 2025-06-06 04:18:48,681 | INFO     | chi2: 1.2264965584869745
[2025-06-06 00:19:07] 2025-06-06 04:18:48,682 | INFO     | current chi2=1.2264965584869745 (change=14.023406543344358 %)
[2025-06-06 00:19:07] 2025-06-06 04:18:48,682 | INFO     | left removable region: 30
[2025-06-06 00:19:07] 2025-06-06 04:18:48,683 | INFO     | sum of square deviations: 149422204769.87234
[2025-06-06 00:19:07] 2025-06-06 04:18:48,723 | INFO     | sum of deviations: 355170703898.56647
[2025-06-06 00:19:07] 2025-06-06 04:18:48,723 | INFO     | mean x: 1749159169.2372448
[2025-06-06 00:19:07] 2025-06-06 04:18:48,723 | INFO     | mean y: 2565801.7066326533
[2025-06-06 00:19:07] 2025-06-06 04:18:48,723 | INFO     | -- intersect: -4155116748.3897314
[2025-06-06 00:19:07] 2025-06-06 04:18:48,724 | INFO     | intersect: -4155116748.3897314
[2025-06-06 00:19:07] 2025-06-06 04:18:48,725 | INFO     | chi2: 0.1532109445137582
[2025-06-06 00:19:07] 2025-06-06 04:18:48,729 | INFO     | -- intersect: -4155116748.3897314
[2025-06-06 00:19:07] 2025-06-06 04:18:48,729 | INFO     | current memory leak: 2.38 B/s (using 784 data points, chi2=0.15)
[2025-06-06 00:19:07] 2025-06-06 04:18:48,731 | INFO     | ..............................
[2025-06-06 00:19:07] 2025-06-06 04:18:48,731 | INFO     | . Timing measurements:
[2025-06-06 00:19:07] 2025-06-06 04:18:48,731 | INFO     | . get job = 0 s
[2025-06-06 00:19:07] 2025-06-06 04:18:48,731 | INFO     | . initial setup = 9 s
[2025-06-06 00:19:07] 2025-06-06 04:18:48,731 | INFO     | . payload setup = 81 s
[2025-06-06 00:19:07] 2025-06-06 04:18:48,731 | INFO     | . stage-in = 0 s
[2025-06-06 00:19:07] 2025-06-06 04:18:48,732 | INFO     | . payload execution = 50093 s
[2025-06-06 00:19:07] 2025-06-06 04:18:48,745 | INFO     | . stage-out = 3 s
[2025-06-06 00:19:07] 2025-06-06 04:18:48,745 | INFO     | . log creation = 0 s
[2025-06-06 00:19:07] 2025-06-06 04:18:48,745 | INFO     | ..............................
[2025-06-06 00:19:07] 2025-06-06 04:18:49,152 | INFO     | 
[2025-06-06 00:19:07] 2025-06-06 04:18:49,152 | INFO     | job summary report
[2025-06-06 00:19:07] 2025-06-06 04:18:49,152 | INFO     | --------------------------------------------------
[2025-06-06 00:19:07] 2025-06-06 04:18:49,153 | INFO     | PanDA job id: 6667923948
[2025-06-06 00:19:07] 2025-06-06 04:18:49,153 | INFO     | task id: 44871837
[2025-06-06 00:19:07] 2025-06-06 04:18:49,153 | INFO     | errors: (none)
[2025-06-06 00:19:07] 2025-06-06 04:18:49,153 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:19:07] 2025-06-06 04:18:49,153 | INFO     | pilot state: finished 
[2025-06-06 00:19:07] 2025-06-06 04:18:49,153 | INFO     | transexitcode: 0
[2025-06-06 00:19:07] 2025-06-06 04:18:49,153 | INFO     | exeerrorcode: 0
[2025-06-06 00:19:07] 2025-06-06 04:18:49,154 | INFO     | exeerrordiag: 
[2025-06-06 00:19:07] 2025-06-06 04:18:49,154 | INFO     | exitcode: 0
[2025-06-06 00:19:07] 2025-06-06 04:18:49,178 | INFO     | exitmsg: OK
[2025-06-06 00:19:07] 2025-06-06 04:18:49,178 | INFO     | cpuconsumptiontime: 112005 s
[2025-06-06 00:19:07] 2025-06-06 04:18:49,178 | INFO     | nevents: 400
[2025-06-06 00:19:07] 2025-06-06 04:18:49,179 | INFO     | neventsw: 0
[2025-06-06 00:19:07] 2025-06-06 04:18:49,179 | INFO     | pid: 30901
[2025-06-06 00:19:07] 2025-06-06 04:18:49,179 | INFO     | pgrp: 30901
[2025-06-06 00:19:07] 2025-06-06 04:18:49,179 | INFO     | corecount: 10
[2025-06-06 00:19:07] 2025-06-06 04:18:49,179 | INFO     | event service: False
[2025-06-06 00:19:07] 2025-06-06 04:18:49,179 | INFO     | sizes: {0: 2397165, 1: 2397249, 2: 2397448, 13: 2397448, 23: 2397504, 34: 2397532, 45: 2397922, 50178: 2443974, 50179: 2443973, 50182: 2452998, 50184: 2453054, 502
[2025-06-06 00:19:07] 2025-06-06 04:18:49,180 | INFO     | --------------------------------------------------
[2025-06-06 00:19:07] 2025-06-06 04:18:49,180 | INFO     | 
[2025-06-06 00:19:07] 2025-06-06 04:18:49,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 00:19:07] 2025-06-06 04:18:49,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:19:07] 2025-06-06 04:18:49,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:19:07] 2025-06-06 04:18:49,416 | INFO     | job 6667923948 has completed (purged errors)
[2025-06-06 00:19:07] 2025-06-06 04:18:49,416 | INFO     | overall cleanup function is called
[2025-06-06 00:19:07] 2025-06-06 04:18:50,426 | INFO     | --- collectZombieJob: --- 10, [30901]
[2025-06-06 00:19:07] 2025-06-06 04:18:50,426 | INFO     | zombie collector waiting for pid 30901
[2025-06-06 00:19:07] 2025-06-06 04:18:50,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:19:07] 2025-06-06 04:18:50,427 | INFO     | collected zombie processes
[2025-06-06 00:19:07] 2025-06-06 04:18:50,427 | INFO     | will attempt to kill all subprocesses of pid=30901
[2025-06-06 00:19:07] 2025-06-06 04:18:50,893 | INFO     | process IDs to be killed: [30901] (in reverse order)
[2025-06-06 00:19:07] 2025-06-06 04:18:51,129 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:19:07] 2025-06-06 04:18:51,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:19:07] 2025-06-06 04:18:51,203 | INFO     | did not find any defunct processes belonging to 30901
[2025-06-06 00:19:07] 2025-06-06 04:18:51,315 | INFO     | did not find any defunct processes belonging to 30901
[2025-06-06 00:19:07] 2025-06-06 04:18:51,316 | INFO     | ready for new job
[2025-06-06 00:19:07] 2025-06-06 04:18:51,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:19:07] 2025-06-06 04:18:51,353 | INFO     | **************************************
[2025-06-06 00:19:07] 2025-06-06 04:18:51,354 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:19:07] 2025-06-06 04:18:51,354 | INFO     | **************************************
[2025-06-06 00:19:07] 2025-06-06 04:18:51,354 | INFO     | 
[2025-06-06 00:19:07] 2025-06-06 04:18:51,383 | INFO     | architecture information:
[2025-06-06 00:19:07] 2025-06-06 04:18:51,387 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:19:07] 2025-06-06 04:18:51,513 | INFO     | cat /etc/os-release:
[2025-06-06 00:19:07] NAME="CentOS Linux"
[2025-06-06 00:19:07] VERSION="7 (Core)"
[2025-06-06 00:19:07] ID="centos"
[2025-06-06 00:19:07] ID_LIKE="rhel fedora"
[2025-06-06 00:19:07] VERSION_ID="7"
[2025-06-06 00:19:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:19:07] ANSI_COLOR="0;31"
[2025-06-06 00:19:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:19:07] HOME_URL="https://www.centos.org/"
[2025-06-06 00:19:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:19:07] 
[2025-06-06 00:19:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:19:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:19:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:19:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:19:07] 
[2025-06-06 00:19:07] 2025-06-06 04:18:51,513 | INFO     | **************************************
[2025-06-06 00:19:07] 2025-06-06 04:18:52,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 00:19:07] 2025-06-06 04:18:52,103 | INFO     | sufficient remaining disk space (56954454016 B)
[2025-06-06 00:19:07] 2025-06-06 04:18:52,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:19:07] 2025-06-06 04:18:52,104 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:19:07] 2025-06-06 04:18:52,104 | INFO     | update_server=False
[2025-06-06 00:19:07] 2025-06-06 04:18:52,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:19:07] 2025-06-06 04:18:52,105 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 00:19:07] 2025-06-06 04:18:52,105 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:19:07] 2025-06-06 04:18:52,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:19:07] 2025-06-06 04:18:52,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:19:07] 2025-06-06 04:18:52,278 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 00:19:07] 2025-06-06 04:18:52,278 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 00:19:07] 2025-06-06 04:18:52,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:19:07] 2025-06-06 04:18:52,287 | INFO     | will abort loop
[2025-06-06 00:19:07] 2025-06-06 04:18:52,354 | INFO     | all data control threads have been joined
[2025-06-06 00:19:07] 2025-06-06 04:18:52,436 | INFO     | all job control threads have been joined
[2025-06-06 00:19:07] 2025-06-06 04:18:52,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:19:07] 2025-06-06 04:18:52,560 | INFO     | all payload control threads have been joined
[2025-06-06 00:19:07] 2025-06-06 04:18:53,114 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,221 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,293 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,360 | INFO     | [data] control thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,442 | INFO     | [job] control thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,566 | INFO     | [payload] control thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,718 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:53,937 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:54,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:19:07] 2025-06-06 04:18:54,120 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:54,164 | INFO     | [job] validate thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:54,166 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:54,479 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:54,487 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:54,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:19:07] 2025-06-06 04:18:55,041 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:58,561 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:19:07] 2025-06-06 04:18:59,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566096381760)>', '<ExcThread(monitor, started 140565656090368)>']
[2025-06-06 00:19:07] 2025-06-06 04:19:00,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:19:07] 2025-06-06 04:19:00,187 | INFO     | [monitor] control thread has ended
[2025-06-06 00:19:07] 2025-06-06 04:19:04,882 | INFO     | all workflow threads have been joined
[2025-06-06 00:19:07] 2025-06-06 04:19:04,882 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:19:07] 2025-06-06 04:19:04,883 | INFO     | traces error code: 0
[2025-06-06 00:19:07] 2025-06-06 04:19:04,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:19:07] 2025-06-06 04:19:05,249 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:19:07] 2025-06-06 04:19:05,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:19:07] 2025-06-06 04:19:05,332 [wrapper] pilotpid: 21001
[2025-06-06 00:19:07] 2025-06-06 04:19:05,376 [wrapper] Pilot exit status: 0
[2025-06-06 00:19:07] 2025-06-06 04:19:05,522 [wrapper] pandaids: 6667923948
[2025-06-06 00:19:07] 2025-06-06 04:19:05,726 [wrapper] cleanup supervisor_pilot 32964 21002
[2025-06-06 00:19:07] 2025-06-06 04:19:05,750 [wrapper] Test setup, not cleaning
[2025-06-06 00:19:07] 2025-06-06 04:19:05,789 [wrapper] apfmon messages muted
[2025-06-06 00:19:07] 2025-06-06 04:19:05,833 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:19:07] 2025-06-06 04:19:05,920 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:19:07]  *** Error codes and diagnostics ***
[2025-06-06 00:19:07]     "exeErrorCode": 0,
[2025-06-06 00:19:07]     "exeErrorDiag": "",
[2025-06-06 00:19:07]     "pilotErrorCode": 0,
[2025-06-06 00:19:07]     "pilotErrorDiag": "",
[2025-06-06 00:19:07]  *** Listing of results directory ***
[2025-06-06 00:19:07] total 423712
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas      5111 May 27 23:41 queuedata.json
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-06 00:19:07] -rwx------ 1 boincer umatlas     37140 May 27 23:43 runpilot2-wrapper.sh
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas       100 Jun  5 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:19:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 10:18 run_atlas
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas       105 Jun  5 10:18 job.xml
[2025-06-06 00:19:07] -rw-r--r-- 2 boincer umatlas 223204170 Jun  5 10:18 EVNT.44871834._003054.pool.root.1
[2025-06-06 00:19:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 10:18 start_atlas.sh
[2025-06-06 00:19:07] drwxrwx--x 2 boincer umatlas      4096 Jun  5 10:18 shared
[2025-06-06 00:19:07] -rw-r--r-- 2 boincer umatlas    508882 Jun  5 10:18 input.tar.gz
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas         0 Jun  5 10:18 boinc_lockfile
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 10:18 pandaJob.out
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas    983210 Jun  5 10:20 agis_schedconf.cvmfs.json
[2025-06-06 00:19:07] drwx------ 4 boincer umatlas      4096 Jun  5 10:20 pilot3
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas 197583069 Jun  6 00:16 HITS.44871837._078134.pool.root.1
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas       532 Jun  6 00:16 boinc_task_state.xml
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas      1061 Jun  6 00:17 memory_monitor_summary.json
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas   1598969 Jun  6 00:17 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas    743406 Jun  6 00:18 log.44871837._078134.job.log.tgz.1
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas      6037 Jun  6 00:18 init_data.xml
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas        95 Jun  6 00:18 pilot_heartbeat.json
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas      7772 Jun  6 00:18 heartbeat.json
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas      8192 Jun  6 00:18 boinc_mmap_file
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas        29 Jun  6 00:18 wrapper_checkpoint.txt
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas      4662 Jun  6 00:19 pilotlog.txt
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas   3888360 Jun  6 00:19 log.44871837._078134.job.log.1
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas       357 Jun  6 00:19 output.list
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas       620 Jun  6 00:19 runtime_log
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas   4648960 Jun  6 00:19 result.tar.gz
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas      8662 Jun  6 00:19 runtime_log.err
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas       666 Jun  6 00:19 2QdNDmssMe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCAbKDmNsWjHn.diag
[2025-06-06 00:19:07] -rw-r--r-- 1 boincer umatlas     20939 Jun  6 00:19 stderr.txt
[2025-06-06 00:19:07] HITS file was successfully produced:
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas 197583069 Jun  6 00:16 shared/HITS.pool.root.1
[2025-06-06 00:19:07]  *** Contents of shared directory: ***
[2025-06-06 00:19:07] total 415992
[2025-06-06 00:19:07] -rw-r--r-- 2 boincer umatlas 223204170 Jun  5 10:18 ATLAS.root_0
[2025-06-06 00:19:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 10:18 start_atlas.sh
[2025-06-06 00:19:07] -rw-r--r-- 2 boincer umatlas    508882 Jun  5 10:18 input.tar.gz
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas 197583069 Jun  6 00:16 HITS.pool.root.1
[2025-06-06 00:19:07] -rw------- 1 boincer umatlas   4648960 Jun  6 00:19 result.tar.gz
00:19:09 (8781): run_atlas exited; CPU time 113336.165559
00:19:09 (8781): called boinc_finish(0)

</stderr_txt>
]]>

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