Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:29 (24454): wrapper (7.7.26015): starting
10:04:29 (24454): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 10:04:29] Arguments: --nthreads 8
[2025-06-05 10:04:29] Threads: 8
[2025-06-05 10:04:29] Checking for CVMFS
[2025-06-05 10:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:04:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:04:31] 2.11.2.0 5309 12901 163720 146820 2 522 17936018 18432001 20265 130560 0 70740200 99.750 34220398 64338 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 10:04:31] CVMFS is ok
[2025-06-05 10:04:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:04:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:04:31] Further information can be found at the LHC@home message board.
[2025-06-05 10:04:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:04:31] Checking for apptainer binary...
[2025-06-05 10:04:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:04:31] Running /usr/bin/apptainer --version
[2025-06-05 10:04:31] apptainer version 1.3.2-1.el7
[2025-06-05 10:04:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:04:45] c-212-7.aglt2.org
[2025-06-05 10:04:45] apptainer works
[2025-06-05 10:04:45] Set ATHENA_PROC_NUMBER=8
[2025-06-05 10:04:45] Set ATHENA_CORE_NUMBER=8
[2025-06-05 10:04:45] Starting ATLAS job with PandaID=6668232271
[2025-06-05 10:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:57:10]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:57:10] 2025-06-05 16:56:43,147 | INFO     | monitor loop #734: job 0:6668232271 is in state 'finished'
[2025-06-05 12:57:10] 2025-06-05 16:56:43,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:57:10] 2025-06-05 16:56:45,656 | INFO     | monitor loop #735: job 0:6668232271 is in state 'finished'
[2025-06-05 12:57:10] 2025-06-05 16:56:45,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,161 | INFO     | monitor loop #736: job 0:6668232271 is in state 'finished'
[2025-06-05 12:57:10] 2025-06-05 16:56:48,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,762 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 12:57:10] 2025-06-05 16:56:48,762 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668232271/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,763 | INFO     | extracted standard info from prmon json
[2025-06-05 12:57:10] 2025-06-05 16:56:48,763 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:57:10] 2025-06-05 16:56:48,763 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:57:10] 2025-06-05 16:56:48,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:57:10] 2025-06-05 16:56:48,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:57:10] 2025-06-05 16:56:48,766 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:57:10] 2025-06-05 16:56:48,767 | INFO     | sum of square deviations: 1392881930.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,767 | INFO     | sum of deviations: 28720200255.000008
[2025-06-05 12:57:10] 2025-06-05 16:56:48,767 | INFO     | mean x: 1749137566.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,767 | INFO     | mean y: 2444993.315151515
[2025-06-05 12:57:10] 2025-06-05 16:56:48,768 | INFO     | -- intersect: -36063484276.844376
[2025-06-05 12:57:10] 2025-06-05 16:56:48,768 | INFO     | intersect: -36063484276.844376
[2025-06-05 12:57:10] 2025-06-05 16:56:48,768 | INFO     | chi2: 3.14447638464602
[2025-06-05 12:57:10] 2025-06-05 16:56:48,768 | INFO     | sum of square deviations: 1270051720.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | sum of deviations: 38510069179.5
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | mean x: 1749137413.5
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | mean y: 2456815.40625
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | -- intersect: -53034283135.89014
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | intersect: -53034283135.89014
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | chi2: 2.387897821625334
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | current chi2=2.387897821625334 (change=24.060557958550397 %)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,769 | INFO     | right removable region: 159
[2025-06-05 12:57:10] 2025-06-05 16:56:48,770 | INFO     | sum of square deviations: 1270051720.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,770 | INFO     | sum of deviations: -6505490698.5
[2025-06-05 12:57:10] 2025-06-05 16:56:48,770 | INFO     | mean x: 1749137718.5
[2025-06-05 12:57:10] 2025-06-05 16:56:48,770 | INFO     | mean y: 2488287.19375
[2025-06-05 12:57:10] 2025-06-05 16:56:48,770 | INFO     | -- intersect: 8961965274.553967
[2025-06-05 12:57:10] 2025-06-05 16:56:48,770 | INFO     | intersect: 8961965274.553967
[2025-06-05 12:57:10] 2025-06-05 16:56:48,771 | INFO     | chi2: 0.8177207197455263
[2025-06-05 12:57:10] 2025-06-05 16:56:48,771 | INFO     | current chi2=0.8177207197455263 (change=73.99501157845144 %)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,771 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | sum of deviations: -5855906182.000002
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | mean x: 1749137871.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | mean y: 2487350.083870968
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | -- intersect: 8873285797.64131
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | intersect: 8873285797.64131
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | chi2: 0.799623963566549
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | current chi2=0.799623963566549 (change=2.2130729651327674 %)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | left removable region: 20
[2025-06-05 12:57:10] 2025-06-05 16:56:48,772 | INFO     | sum of square deviations: 832722590.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,773 | INFO     | sum of deviations: 2473664069.9999986
[2025-06-05 12:57:10] 2025-06-05 16:56:48,773 | INFO     | mean x: 1749137993.0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,773 | INFO     | mean y: 2504178.4676258992
[2025-06-05 12:57:10] 2025-06-05 16:56:48,773 | INFO     | -- intersect: -5193439655.307809
[2025-06-05 12:57:10] 2025-06-05 16:56:48,773 | INFO     | intersect: -5193439655.307809
[2025-06-05 12:57:10] 2025-06-05 16:56:48,773 | INFO     | chi2: 0.0002706242169732112
[2025-06-05 12:57:10] 2025-06-05 16:56:48,773 | INFO     | -- intersect: -5193439655.307809
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | current memory leak: 2.97 B/s (using 139 data points, chi2=0.00)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | ..............................
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . Timing measurements:
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . get job = 0 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . initial setup = 5 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . payload setup = 69 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . stage-in = 0 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . payload execution = 10065 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . stage-out = 0 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | . log creation = 0 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,774 | INFO     | ..............................
[2025-06-05 12:57:10] 2025-06-05 16:56:48,930 | INFO     | 
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | job summary report
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | --------------------------------------------------
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | PanDA job id: 6668232271
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | task id: 44871837
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | errors: (none)
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | pilot state: finished 
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | transexitcode: 0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | exeerrorcode: 0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | exeerrordiag: 
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | exitcode: 0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,931 | INFO     | exitmsg: OK
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | cpuconsumptiontime: 45587 s
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | nevents: 400
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | neventsw: 0
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | pid: 42188
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | pgrp: 42188
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | corecount: 8
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | event service: False
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | sizes: {0: 2397392, 11: 2397392, 22: 2397420, 32: 2397448, 40: 2397682, 43: 2397710, 10139: 2426302, 10140: 2435243, 10142: 2435299, 10159: 2435469}
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | --------------------------------------------------
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | 
[2025-06-05 12:57:10] 2025-06-05 16:56:48,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | job 6668232271 has completed (purged errors)
[2025-06-05 12:57:10] 2025-06-05 16:56:49,196 | INFO     | overall cleanup function is called
[2025-06-05 12:57:10] 2025-06-05 16:56:50,216 | INFO     | --- collectZombieJob: --- 10, [42188]
[2025-06-05 12:57:10] 2025-06-05 16:56:50,216 | INFO     | zombie collector waiting for pid 42188
[2025-06-05 12:57:10] 2025-06-05 16:56:50,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:57:10] 2025-06-05 16:56:50,216 | INFO     | collected zombie processes
[2025-06-05 12:57:10] 2025-06-05 16:56:50,216 | INFO     | will attempt to kill all subprocesses of pid=42188
[2025-06-05 12:57:10] 2025-06-05 16:56:50,614 | INFO     | process IDs to be killed: [42188] (in reverse order)
[2025-06-05 12:57:10] 2025-06-05 16:56:50,741 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:57:10] 2025-06-05 16:56:50,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:57:10] 2025-06-05 16:56:50,750 | INFO     | did not find any defunct processes belonging to 42188
[2025-06-05 12:57:10] 2025-06-05 16:56:50,759 | INFO     | did not find any defunct processes belonging to 42188
[2025-06-05 12:57:10] 2025-06-05 16:56:50,760 | INFO     | ready for new job
[2025-06-05 12:57:10] 2025-06-05 16:56:50,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:57:10] 2025-06-05 16:56:50,761 | INFO     | **************************************
[2025-06-05 12:57:10] 2025-06-05 16:56:50,761 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:57:10] 2025-06-05 16:56:50,761 | INFO     | **************************************
[2025-06-05 12:57:10] 2025-06-05 16:56:50,761 | INFO     | 
[2025-06-05 12:57:10] 2025-06-05 16:56:50,764 | INFO     | architecture information:
[2025-06-05 12:57:10] 2025-06-05 16:56:50,765 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:57:10] 2025-06-05 16:56:50,779 | INFO     | cat /etc/os-release:
[2025-06-05 12:57:10] NAME="CentOS Linux"
[2025-06-05 12:57:10] VERSION="7 (Core)"
[2025-06-05 12:57:10] ID="centos"
[2025-06-05 12:57:10] ID_LIKE="rhel fedora"
[2025-06-05 12:57:10] VERSION_ID="7"
[2025-06-05 12:57:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:57:10] ANSI_COLOR="0;31"
[2025-06-05 12:57:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:57:10] HOME_URL="https://www.centos.org/"
[2025-06-05 12:57:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:57:10] 
[2025-06-05 12:57:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:57:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:57:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:57:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:57:10] 
[2025-06-05 12:57:10] 2025-06-05 16:56:50,779 | INFO     | **************************************
[2025-06-05 12:57:10] 2025-06-05 16:56:51,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 12:57:10] 2025-06-05 16:56:51,389 | INFO     | sufficient remaining disk space (106664296448 B)
[2025-06-05 12:57:10] 2025-06-05 16:56:51,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:57:10] 2025-06-05 16:56:51,389 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:57:10] 2025-06-05 16:56:51,389 | INFO     | update_server=False
[2025-06-05 12:57:10] 2025-06-05 16:56:51,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:57:10] 2025-06-05 16:56:51,390 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 12:57:10] 2025-06-05 16:56:51,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:57:10] 2025-06-05 16:56:51,391 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:57:10] 2025-06-05 16:56:51,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:57:10] 2025-06-05 16:56:51,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:57:10] 2025-06-05 16:56:51,490 | INFO     | all job control threads have been joined
[2025-06-05 12:57:10] 2025-06-05 16:56:51,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:57:10] 2025-06-05 16:56:51,672 | INFO     | aborting loop
[2025-06-05 12:57:10] 2025-06-05 16:56:51,793 | INFO     | all data control threads have been joined
[2025-06-05 12:57:10] 2025-06-05 16:56:52,166 | INFO     | all payload control threads have been joined
[2025-06-05 12:57:10] 2025-06-05 16:56:52,395 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:52,496 | INFO     | [job] control thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:52,678 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:52,799 | INFO     | [data] control thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:52,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:57:10] 2025-06-05 16:56:53,098 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,102 | INFO     | [job] validate thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,121 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,172 | INFO     | [payload] control thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,246 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,268 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,771 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,855 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:53,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:57:10] 2025-06-05 16:56:54,837 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:54,951 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:56:55,400 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:57:01,766 | INFO     | job.realtimelogging is not enabled
[2025-06-05 12:57:10] 2025-06-05 16:57:02,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:57:10] 2025-06-05 16:57:04,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983483750208)>', '<ExcThread(monitor, started 139982899500800)>']
[2025-06-05 12:57:10] 2025-06-05 16:57:05,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:57:10] 2025-06-05 16:57:05,475 | INFO     | [monitor] control thread has ended
[2025-06-05 12:57:10] 2025-06-05 16:57:09,692 | INFO     | all workflow threads have been joined
[2025-06-05 12:57:10] 2025-06-05 16:57:09,692 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:57:10] 2025-06-05 16:57:09,692 | INFO     | traces error code: 0
[2025-06-05 12:57:10] 2025-06-05 16:57:09,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:57:10] 2025-06-05 16:57:09,826 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:57:10] 2025-06-05 16:57:09,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:57:10] 2025-06-05 16:57:09,843 [wrapper] pilotpid: 32976
[2025-06-05 12:57:10] 2025-06-05 16:57:09,847 [wrapper] Pilot exit status: 0
[2025-06-05 12:57:10] 2025-06-05 16:57:09,867 [wrapper] pandaids: 6668232271
[2025-06-05 12:57:10] 2025-06-05 16:57:09,959 [wrapper] cleanup supervisor_pilot   635 32977
[2025-06-05 12:57:10] 2025-06-05 16:57:09,963 [wrapper] Test setup, not cleaning
[2025-06-05 12:57:10] 2025-06-05 16:57:09,965 [wrapper] apfmon messages muted
[2025-06-05 12:57:10] 2025-06-05 16:57:09,967 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:57:10] 2025-06-05 16:57:09,969 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:57:10]  *** Error codes and diagnostics ***
[2025-06-05 12:57:10]     "exeErrorCode": 0,
[2025-06-05 12:57:10]     "exeErrorDiag": "",
[2025-06-05 12:57:10]     "pilotErrorCode": 0,
[2025-06-05 12:57:10]     "pilotErrorDiag": "",
[2025-06-05 12:57:10]  *** Listing of results directory ***
[2025-06-05 12:57:10] total 418564
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas      5111 May 28 04:27 queuedata.json
[2025-06-05 12:57:10] -rwx------ 1 boincer umatlas     37140 May 28 04:27 runpilot2-wrapper.sh
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas       100 Jun  5 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:57:10] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 10:04 run_atlas
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas       105 Jun  5 10:04 job.xml
[2025-06-05 12:57:10] -rw-r--r-- 2 boincer umatlas 224680898 Jun  5 10:04 EVNT.44871834._003179.pool.root.1
[2025-06-05 12:57:10] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 10:04 start_atlas.sh
[2025-06-05 12:57:10] drwxrwx--x 2 boincer umatlas      4096 Jun  5 10:04 shared
[2025-06-05 12:57:10] -rw-r--r-- 2 boincer umatlas    508879 Jun  5 10:04 input.tar.gz
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas         0 Jun  5 10:04 boinc_lockfile
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 10:04 pandaJob.out
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas    983210 Jun  5 10:06 agis_schedconf.cvmfs.json
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas   1598969 Jun  5 10:06 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:57:10] drwx------ 4 boincer umatlas      4096 Jun  5 10:06 pilot3
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas      6386 Jun  5 12:45 init_data.xml
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas 197538274 Jun  5 12:55 HITS.44871837._081415.pool.root.1
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas       530 Jun  5 12:55 boinc_task_state.xml
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas        95 Jun  5 12:56 pilot_heartbeat.json
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas      1081 Jun  5 12:56 memory_monitor_summary.json
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas    359369 Jun  5 12:56 log.44871837._081415.job.log.tgz.1
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas      7749 Jun  5 12:56 heartbeat.json
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 12:57 boinc_mmap_file
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas        28 Jun  5 12:57 wrapper_checkpoint.txt
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas      4549 Jun  5 12:57 pilotlog.txt
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas    920870 Jun  5 12:57 log.44871837._081415.job.log.1
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas       357 Jun  5 12:57 output.list
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas       620 Jun  5 12:57 runtime_log
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas   1300480 Jun  5 12:57 result.tar.gz
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas      8655 Jun  5 12:57 runtime_log.err
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas       661 Jun  5 12:57 ABkNDmTJRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3fbKDmf1AwWo.diag
[2025-06-05 12:57:10] -rw-r--r-- 1 boincer umatlas     21072 Jun  5 12:57 stderr.txt
[2025-06-05 12:57:10] HITS file was successfully produced:
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas 197538274 Jun  5 12:55 shared/HITS.pool.root.1
[2025-06-05 12:57:10]  *** Contents of shared directory: ***
[2025-06-05 12:57:10] total 414120
[2025-06-05 12:57:10] -rw-r--r-- 2 boincer umatlas 224680898 Jun  5 10:04 ATLAS.root_0
[2025-06-05 12:57:10] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 10:04 start_atlas.sh
[2025-06-05 12:57:10] -rw-r--r-- 2 boincer umatlas    508879 Jun  5 10:04 input.tar.gz
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas 197538274 Jun  5 12:55 HITS.pool.root.1
[2025-06-05 12:57:10] -rw------- 1 boincer umatlas   1300480 Jun  5 12:57 result.tar.gz
12:57:12 (24454): run_atlas exited; CPU time 45180.756871
12:57:12 (24454): called boinc_finish(0)

</stderr_txt>
]]>

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