Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:59:59 (3490): wrapper (7.7.26015): starting
15:59:59 (3490): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:59:59] Arguments: --nthreads 8
[2025-06-05 15:59:59] Threads: 8
[2025-06-05 15:59:59] Checking for CVMFS
[2025-06-05 15:59:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:59:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:59:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:00:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:00:00] 2.11.2.0 31726 34739 90380 146820 1 206 17611809 25165824 3319 130560 0 18029405 99.759 21278363 2022 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 16:00:00] CVMFS is ok
[2025-06-05 16:00:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:00:00] Checking for apptainer binary...
[2025-06-05 16:00:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:00:00] Running /usr/bin/apptainer --version
[2025-06-05 16:00:00] apptainer version 1.3.2-1.el7
[2025-06-05 16:00:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:00:01] cg-vwn427.simple-grid.lan
[2025-06-05 16:00:01] apptainer works
[2025-06-05 16:00:01] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:00:01] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:00:01] Starting ATLAS job with PandaID=6668232100
[2025-06-05 16:00:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:08:04]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:08:04] 2025-06-05 19:07:43,625 | INFO     | mean y: 2503575.3951890036
[2025-06-05 21:08:04] 2025-06-05 19:07:43,625 | INFO     | -- intersect: -4136532276.457213
[2025-06-05 21:08:04] 2025-06-05 19:07:43,625 | INFO     | intersect: -4136532276.457213
[2025-06-05 21:08:04] 2025-06-05 19:07:43,626 | INFO     | chi2: 0.0032935054603413986
[2025-06-05 21:08:04] 2025-06-05 19:07:43,626 | INFO     | current chi2=0.0032935054603413986 (change=72.73234098781889 %)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,626 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 21:08:04] 2025-06-05 19:07:43,629 | INFO     | sum of deviations: 15130561298.5
[2025-06-05 21:08:04] 2025-06-05 19:07:43,629 | INFO     | mean x: 1749141713.5
[2025-06-05 21:08:04] 2025-06-05 19:07:43,629 | INFO     | mean y: 2504736.0664335666
[2025-06-05 21:08:04] 2025-06-05 19:07:43,629 | INFO     | -- intersect: -3645948822.4951024
[2025-06-05 21:08:04] 2025-06-05 19:07:43,629 | INFO     | intersect: -3645948822.4951024
[2025-06-05 21:08:04] 2025-06-05 19:07:43,630 | INFO     | chi2: 0.0013843207338021868
[2025-06-05 21:08:04] 2025-06-05 19:07:43,630 | INFO     | current chi2=0.0013843207338021868 (change=57.96816642718756 %)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,630 | INFO     | sum of square deviations: 6880054580.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,633 | INFO     | sum of deviations: 13009546128.000002
[2025-06-05 21:08:04] 2025-06-05 19:07:43,633 | INFO     | mean x: 1749141866.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,633 | INFO     | mean y: 2505600.775800712
[2025-06-05 21:08:04] 2025-06-05 19:07:43,633 | INFO     | -- intersect: -3304959699.9054327
[2025-06-05 21:08:04] 2025-06-05 19:07:43,634 | INFO     | intersect: -3304959699.9054327
[2025-06-05 21:08:04] 2025-06-05 19:07:43,634 | INFO     | chi2: 0.0005559402620068767
[2025-06-05 21:08:04] 2025-06-05 19:07:43,634 | INFO     | current chi2=0.0005559402620068767 (change=59.84021271718394 %)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,635 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,637 | INFO     | sum of deviations: 11606910145.499998
[2025-06-05 21:08:04] 2025-06-05 19:07:43,637 | INFO     | mean x: 1749142018.5
[2025-06-05 21:08:04] 2025-06-05 19:07:43,637 | INFO     | mean y: 2506192.9891304346
[2025-06-05 21:08:04] 2025-06-05 19:07:43,637 | INFO     | -- intersect: -3111659572.5194874
[2025-06-05 21:08:04] 2025-06-05 19:07:43,637 | INFO     | intersect: -3111659572.5194874
[2025-06-05 21:08:04] 2025-06-05 19:07:43,638 | INFO     | chi2: 0.00029561143964501824
[2025-06-05 21:08:04] 2025-06-05 19:07:43,638 | INFO     | current chi2=0.00029561143964501824 (change=46.82676182187328 %)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,638 | INFO     | sum of square deviations: 6171352920.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,641 | INFO     | sum of deviations: 10497221783.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,641 | INFO     | mean x: 1749142171.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,641 | INFO     | mean y: 2506679.3874538746
[2025-06-05 21:08:04] 2025-06-05 19:07:43,641 | INFO     | -- intersect: -2972713428.26199
[2025-06-05 21:08:04] 2025-06-05 19:07:43,641 | INFO     | intersect: -2972713428.26199
[2025-06-05 21:08:04] 2025-06-05 19:07:43,642 | INFO     | chi2: 0.00017805336252383228
[2025-06-05 21:08:04] 2025-06-05 19:07:43,642 | INFO     | current chi2=0.00017805336252383228 (change=39.767769901717706 %)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,642 | INFO     | sum of square deviations: 5836025702.5
[2025-06-05 21:08:04] 2025-06-05 19:07:43,644 | INFO     | sum of deviations: 9865197031.500002
[2025-06-05 21:08:04] 2025-06-05 19:07:43,645 | INFO     | mean x: 1749142323.5
[2025-06-05 21:08:04] 2025-06-05 19:07:43,645 | INFO     | mean y: 2506966.0488721803
[2025-06-05 21:08:04] 2025-06-05 19:07:43,645 | INFO     | -- intersect: -2954236978.733852
[2025-06-05 21:08:04] 2025-06-05 19:07:43,645 | INFO     | intersect: -2954236978.733852
[2025-06-05 21:08:04] 2025-06-05 19:07:43,645 | INFO     | chi2: 0.0001510522724736541
[2025-06-05 21:08:04] 2025-06-05 19:07:43,646 | INFO     | current chi2=0.0001510522724736541 (change=15.164605524685962 %)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,646 | INFO     | left removable region: 70
[2025-06-05 21:08:04] 2025-06-05 19:07:43,646 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,648 | INFO     | sum of deviations: 6124343086.999998
[2025-06-05 21:08:04] 2025-06-05 19:07:43,648 | INFO     | mean x: 1749143208.0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,648 | INFO     | mean y: 2508392.5688888887
[2025-06-05 21:08:04] 2025-06-05 19:07:43,648 | INFO     | -- intersect: -3030457178.655661
[2025-06-05 21:08:04] 2025-06-05 19:07:43,648 | INFO     | intersect: -3030457178.655661
[2025-06-05 21:08:04] 2025-06-05 19:07:43,649 | INFO     | chi2: 0.00014739072710861467
[2025-06-05 21:08:04] 2025-06-05 19:07:43,649 | INFO     | -- intersect: -3030457178.655661
[2025-06-05 21:08:04] 2025-06-05 19:07:43,649 | INFO     | current memory leak: 1.73 B/s (using 225 data points, chi2=0.00)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,650 | INFO     | ..............................
[2025-06-05 21:08:04] 2025-06-05 19:07:43,650 | INFO     | . Timing measurements:
[2025-06-05 21:08:04] 2025-06-05 19:07:43,650 | INFO     | . get job = 0 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,650 | INFO     | . initial setup = 2 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,650 | INFO     | . payload setup = 18 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,651 | INFO     | . stage-in = 0 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,651 | INFO     | . payload execution = 18383 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,651 | INFO     | . stage-out = 2 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,651 | INFO     | . log creation = 0 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,651 | INFO     | ..............................
[2025-06-05 21:08:04] 2025-06-05 19:07:43,786 | INFO     | 
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | job summary report
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | --------------------------------------------------
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | PanDA job id: 6668232100
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | task id: 44871837
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | errors: (none)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | pilot state: finished 
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | transexitcode: 0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | exeerrorcode: 0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,787 | INFO     | exeerrordiag: 
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | exitcode: 0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | exitmsg: OK
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | cpuconsumptiontime: 69715 s
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | nevents: 400
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | neventsw: 0
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | pid: 16528
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | pgrp: 16528
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | corecount: 8
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | event service: False
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | sizes: {0: 2397393, 1: 2397393, 9: 2397627, 12: 2397655, 18405: 2429252, 18406: 2429251, 18408: 2438378, 18409: 2438434, 18419: 2438604}
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | --------------------------------------------------
[2025-06-05 21:08:04] 2025-06-05 19:07:43,788 | INFO     | 
[2025-06-05 21:08:04] 2025-06-05 19:07:43,789 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-05 21:08:04] 2025-06-05 19:07:43,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,828 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,828 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,828 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | job 6668232100 has completed (purged errors)
[2025-06-05 21:08:04] 2025-06-05 19:07:43,830 | INFO     | overall cleanup function is called
[2025-06-05 21:08:04] 2025-06-05 19:07:44,840 | INFO     | --- collectZombieJob: --- 10, [16528]
[2025-06-05 21:08:04] 2025-06-05 19:07:44,840 | INFO     | zombie collector waiting for pid 16528
[2025-06-05 21:08:04] 2025-06-05 19:07:44,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:08:04] 2025-06-05 19:07:44,840 | INFO     | collected zombie processes
[2025-06-05 21:08:04] 2025-06-05 19:07:44,840 | INFO     | will attempt to kill all subprocesses of pid=16528
[2025-06-05 21:08:04] 2025-06-05 19:07:44,954 | INFO     | process IDs to be killed: [16528] (in reverse order)
[2025-06-05 21:08:04] 2025-06-05 19:07:45,124 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:08:04] 2025-06-05 19:07:45,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:08:04] 2025-06-05 19:07:45,128 | INFO     | did not find any defunct processes belonging to 16528
[2025-06-05 21:08:04] 2025-06-05 19:07:45,133 | INFO     | did not find any defunct processes belonging to 16528
[2025-06-05 21:08:04] 2025-06-05 19:07:45,134 | INFO     | ready for new job
[2025-06-05 21:08:04] 2025-06-05 19:07:45,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:08:04] 2025-06-05 19:07:45,136 | INFO     | **************************************
[2025-06-05 21:08:04] 2025-06-05 19:07:45,137 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:08:04] 2025-06-05 19:07:45,137 | INFO     | **************************************
[2025-06-05 21:08:04] 2025-06-05 19:07:45,137 | INFO     | 
[2025-06-05 21:08:04] 2025-06-05 19:07:45,137 | INFO     | pilot is running in a VM
[2025-06-05 21:08:04] 2025-06-05 19:07:45,138 | INFO     | architecture information:
[2025-06-05 21:08:04] 2025-06-05 19:07:45,138 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:08:04] 2025-06-05 19:07:45,233 | INFO     | cat /etc/os-release:
[2025-06-05 21:08:04] NAME="CentOS Linux"
[2025-06-05 21:08:04] VERSION="7 (Core)"
[2025-06-05 21:08:04] ID="centos"
[2025-06-05 21:08:04] ID_LIKE="rhel fedora"
[2025-06-05 21:08:04] VERSION_ID="7"
[2025-06-05 21:08:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:08:04] ANSI_COLOR="0;31"
[2025-06-05 21:08:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:08:04] HOME_URL="https://www.centos.org/"
[2025-06-05 21:08:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:08:04] 
[2025-06-05 21:08:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:08:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:08:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:08:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:08:04] 
[2025-06-05 21:08:04] 2025-06-05 19:07:45,234 | INFO     | **************************************
[2025-06-05 21:08:04] 2025-06-05 19:07:45,737 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-05 21:08:04] 2025-06-05 19:07:45,809 | INFO     | sufficient remaining disk space (497392025600 B)
[2025-06-05 21:08:04] 2025-06-05 19:07:45,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:08:04] 2025-06-05 19:07:45,810 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:08:04] 2025-06-05 19:07:45,810 | INFO     | update_server=False
[2025-06-05 21:08:04] 2025-06-05 19:07:45,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:08:04] 2025-06-05 19:07:45,810 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:08:04] 2025-06-05 19:07:45,811 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:08:04] 2025-06-05 19:07:45,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:08:04] 2025-06-05 19:07:45,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:08:04] 2025-06-05 19:07:45,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:08:04] 2025-06-05 19:07:46,412 | INFO     | all payload control threads have been joined
[2025-06-05 21:08:04] 2025-06-05 19:07:46,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:08:04] 2025-06-05 19:07:46,802 | INFO     | aborting loop
[2025-06-05 21:08:04] 2025-06-05 19:07:46,817 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:46,824 | INFO     | all data control threads have been joined
[2025-06-05 21:08:04] 2025-06-05 19:07:46,828 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,223 | INFO     | all job control threads have been joined
[2025-06-05 21:08:04] 2025-06-05 19:07:47,291 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,419 | INFO     | [payload] control thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,680 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,722 | INFO     | [job] validate thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,738 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,807 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,818 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,829 | INFO     | [data] control thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:47,982 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:48,194 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:48,230 | INFO     | [job] control thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:48,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:08:04] 2025-06-05 19:07:48,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:08:04] 2025-06-05 19:07:49,807 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:52,258 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:56,735 | INFO     | job.realtimelogging is not enabled
[2025-06-05 21:08:04] 2025-06-05 19:07:57,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:08:04] 2025-06-05 19:07:58,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140191896012608)>', '<ExcThread(monitor, started 140191465457408)>']
[2025-06-05 21:08:04] 2025-06-05 19:07:58,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:08:04] 2025-06-05 19:07:58,889 | INFO     | [monitor] control thread has ended
[2025-06-05 21:08:04] 2025-06-05 19:08:03,247 | INFO     | all workflow threads have been joined
[2025-06-05 21:08:04] 2025-06-05 19:08:03,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:08:04] 2025-06-05 19:08:03,247 | INFO     | traces error code: 0
[2025-06-05 21:08:04] 2025-06-05 19:08:03,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:08:04] 2025-06-05 19:08:03,558 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:08:04] 2025-06-05 19:08:03,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:08:04] 2025-06-05 19:08:03,702 [wrapper] pilotpid: 7154
[2025-06-05 21:08:04] 2025-06-05 19:08:03,732 [wrapper] Pilot exit status: 0
[2025-06-05 21:08:04] 2025-06-05 19:08:03,810 [wrapper] pandaids: 6668232100
[2025-06-05 21:08:04] 2025-06-05 19:08:03,865 [wrapper] cleanup supervisor_pilot  7751 7155
[2025-06-05 21:08:04] 2025-06-05 19:08:03,882 [wrapper] Test setup, not cleaning
[2025-06-05 21:08:04] 2025-06-05 19:08:03,889 [wrapper] apfmon messages muted
[2025-06-05 21:08:04] 2025-06-05 19:08:03,894 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:08:04] 2025-06-05 19:08:03,902 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:08:04]  *** Error codes and diagnostics ***
[2025-06-05 21:08:04]     "exeErrorCode": 0,
[2025-06-05 21:08:04]     "exeErrorDiag": "",
[2025-06-05 21:08:04]     "pilotErrorCode": 0,
[2025-06-05 21:08:04]     "pilotErrorDiag": "",
[2025-06-05 21:08:04]  *** Listing of results directory ***
[2025-06-05 21:08:04] total 420964
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc      5111 May 28 10:16 queuedata.json
[2025-06-05 21:08:04] -rwx------. 1 boinc boinc     37140 May 28 10:16 runpilot2-wrapper.sh
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc    495897 May 28 10:16 pilot3.tar.gz
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc       100 Jun  5 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:08:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 15:59 run_atlas
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc       105 Jun  5 15:59 job.xml
[2025-06-05 21:08:04] -rw-r--r--. 2 boinc boinc 226772886 Jun  5 15:59 EVNT.44871834._003172.pool.root.1
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc      6392 Jun  5 15:59 init_data.xml
[2025-06-05 21:08:04] -rw-r--r--. 2 boinc boinc     15093 Jun  5 15:59 start_atlas.sh
[2025-06-05 21:08:04] drwxrwx--x. 2 boinc boinc        68 Jun  5 15:59 shared
[2025-06-05 21:08:04] -rw-r--r--. 2 boinc boinc    508874 Jun  5 15:59 input.tar.gz
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc         0 Jun  5 15:59 boinc_lockfile
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc      2559 Jun  5 16:00 pandaJob.out
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc    983210 Jun  5 16:00 agis_schedconf.cvmfs.json
[2025-06-05 21:08:04] drwx------. 4 boinc boinc      4096 Jun  5 16:00 pilot3
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc        95 Jun  5 21:06 pilot_heartbeat.json
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc 196421525 Jun  5 21:06 HITS.44871837._081244.pool.root.1
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc       531 Jun  5 21:07 boinc_task_state.xml
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc      1015 Jun  5 21:07 memory_monitor_summary.json
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc   1598969 Jun  5 21:07 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc    428674 Jun  5 21:07 log.44871837._081244.job.log.tgz.1
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc      8192 Jun  5 21:07 boinc_mmap_file
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc        28 Jun  5 21:07 wrapper_checkpoint.txt
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc      7683 Jun  5 21:07 heartbeat.json
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc      4612 Jun  5 21:08 pilotlog.txt
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc   1595519 Jun  5 21:08 log.44871837._081244.job.log.1
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc       357 Jun  5 21:08 output.list
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc       620 Jun  5 21:08 runtime_log
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc   2048000 Jun  5 21:08 result.tar.gz
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc       657 Jun  5 21:08 XS2MDm58Qe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOebKDmSUvLbn.diag
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc      8673 Jun  5 21:08 runtime_log.err
[2025-06-05 21:08:04] -rw-r--r--. 1 boinc boinc     20542 Jun  5 21:08 stderr.txt
[2025-06-05 21:08:04] HITS file was successfully produced:
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc 196421525 Jun  5 21:06 shared/HITS.pool.root.1
[2025-06-05 21:08:04]  *** Contents of shared directory: ***
[2025-06-05 21:08:04] total 415796
[2025-06-05 21:08:04] -rw-r--r--. 2 boinc boinc 226772886 Jun  5 15:59 ATLAS.root_0
[2025-06-05 21:08:04] -rw-r--r--. 2 boinc boinc     15093 Jun  5 15:59 start_atlas.sh
[2025-06-05 21:08:04] -rw-r--r--. 2 boinc boinc    508874 Jun  5 15:59 input.tar.gz
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc 196421525 Jun  5 21:06 HITS.pool.root.1
[2025-06-05 21:08:04] -rw-------. 1 boinc boinc   2048000 Jun  5 21:08 result.tar.gz
21:08:05 (3490): run_atlas exited; CPU time 69948.889631
21:08:05 (3490): called boinc_finish(0)

</stderr_txt>
]]>

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