Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:54:22 (25660): wrapper (7.7.26015): starting
09:54:22 (25660): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 09:54:22] Arguments: --nthreads 8
[2025-06-05 09:54:22] Threads: 8
[2025-06-05 09:54:22] Checking for CVMFS
[2025-06-05 09:54:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:54:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:54:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:54:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:54:22] 2.11.2.0 3213 442145 247636 146820 0 1 15808811 20275200 1 130560 0 131405868 99.991 19625831 18387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 09:54:22] CVMFS is ok
[2025-06-05 09:54:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 09:54:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 09:54:22] Further information can be found at the LHC@home message board.
[2025-06-05 09:54:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:54:22] Checking for apptainer binary...
[2025-06-05 09:54:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:54:22] Running /usr/bin/apptainer --version
[2025-06-05 09:54:22] apptainer version 1.3.2-1.el7
[2025-06-05 09:54:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:54:23] c-205-38.aglt2.org
[2025-06-05 09:54:23] apptainer works
[2025-06-05 09:54:23] Set ATHENA_PROC_NUMBER=8
[2025-06-05 09:54:23] Set ATHENA_CORE_NUMBER=8
[2025-06-05 09:54:23] Starting ATLAS job with PandaID=6668439102
[2025-06-05 09:54:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:02:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:02:03]  guid=0997f990-425b-4473-befb-ce716f59124f
[2025-06-05 11:02:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 11:02:03]  is_altstaged=None
[2025-06-05 11:02:03]  is_tar=False
[2025-06-05 11:02:03]  lfn=log.44871837._083438.job.log.tgz.1
[2025-06-05 11:02:03]  mtime=0
[2025-06-05 11:02:03]  protocol_id=None
[2025-06-05 11:02:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 11:02:03]  replicas=None
[2025-06-05 11:02:03]  scope=mc23_13p6TeV
[2025-06-05 11:02:03]  status=None
[2025-06-05 11:02:03]  status_code=0
[2025-06-05 11:02:03]  storage_token=
[2025-06-05 11:02:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668439102/log.44871837._083438.job.log.tgz.1
[2025-06-05 11:02:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/30/log.44871837._083438.job.log.tgz.1
[2025-06-05 11:02:03]  workdir=None
[2025-06-05 11:02:03] ]
[2025-06-05 11:02:03] 2025-06-05 15:01:35,948 | INFO     | transferring file log.44871837._083438.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668439102/log.44871837._083438.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 11:02:03] 2025-06-05 15:01:35,948 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668439102/log.44871837._083438.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._083438.job
[2025-06-05 11:02:03] 2025-06-05 15:01:35,966 | INFO     | adding to output.list: log.44871837._083438.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/30/log.44871837._083438.job.log.tg
[2025-06-05 11:02:03] 2025-06-05 15:01:35,967 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 11:02:03] 2025-06-05 15:01:35,967 | INFO     | summary of transferred files:
[2025-06-05 11:02:03] 2025-06-05 15:01:35,967 | INFO     |  -- lfn=log.44871837._083438.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 11:02:03] 2025-06-05 15:01:35,968 | INFO     | stage-out finished correctly
[2025-06-05 11:02:03] 2025-06-05 15:01:37,530 | INFO     | monitor loop #305: job 0:6668439102 is in state 'finished'
[2025-06-05 11:02:03] 2025-06-05 15:01:37,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:02:03] 2025-06-05 15:01:38,161 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 11:02:03] 2025-06-05 15:01:38,703 | INFO     | job 6668439102 has state=finished
[2025-06-05 11:02:03] 2025-06-05 15:01:38,704 | INFO     | preparing for final server update for job 6668439102 in state='finished'
[2025-06-05 11:02:03] 2025-06-05 15:01:38,704 | INFO     | this job has now completed (state=finished)
[2025-06-05 11:02:03] 2025-06-05 15:01:38,704 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 11:02:03] 2025-06-05 15:01:38,704 | INFO     | log transfer has been attempted: DONE
[2025-06-05 11:02:03] 2025-06-05 15:01:38,705 | INFO     | job 6668439102 has finished - writing final server update
[2025-06-05 11:02:03] 2025-06-05 15:01:38,705 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:02:03] 2025-06-05 15:01:38,707 | INFO     | executing command: lscpu
[2025-06-05 11:02:03] 2025-06-05 15:01:38,738 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:02:03] 2025-06-05 15:01:40,033 | INFO     | monitor loop #306: job 0:6668439102 is in state 'finished'
[2025-06-05 11:02:03] 2025-06-05 15:01:40,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:02:03] 2025-06-05 15:01:42,534 | INFO     | monitor loop #307: job 0:6668439102 is in state 'finished'
[2025-06-05 11:02:03] 2025-06-05 15:01:42,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:02:03] 2025-06-05 15:01:44,336 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:02:03] 2025-06-05 15:01:44,337 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668439102/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:02:03] 2025-06-05 15:01:44,338 | INFO     | extracted standard info from prmon json
[2025-06-05 11:02:03] 2025-06-05 15:01:44,338 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:02:03] 2025-06-05 15:01:44,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:02:03] 2025-06-05 15:01:44,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:02:03] 2025-06-05 15:01:44,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:02:03] 2025-06-05 15:01:44,341 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:02:03] 2025-06-05 15:01:44,341 | INFO     | sum of square deviations: 63666310.0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,342 | INFO     | sum of deviations: -686931126.0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,342 | INFO     | mean x: 1749133768.0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,342 | INFO     | mean y: 2539747.661016949
[2025-06-05 11:02:03] 2025-06-05 15:01:44,342 | INFO     | -- intersect: 18874913987.29989
[2025-06-05 11:02:03] 2025-06-05 15:01:44,342 | INFO     | intersect: 18874913987.29989
[2025-06-05 11:02:03] 2025-06-05 15:01:44,342 | INFO     | chi2: 0.010438495416224729
[2025-06-05 11:02:03] 2025-06-05 15:01:44,342 | INFO     | -- intersect: 18874913987.29989
[2025-06-05 11:02:03] 2025-06-05 15:01:44,343 | INFO     | current memory leak: -10.79 B/s (using 59 data points, chi2=0.01)
[2025-06-05 11:02:03] 2025-06-05 15:01:44,343 | INFO     | ..............................
[2025-06-05 11:02:03] 2025-06-05 15:01:44,343 | INFO     | . Timing measurements:
[2025-06-05 11:02:03] 2025-06-05 15:01:44,343 | INFO     | . get job = 0 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,343 | INFO     | . initial setup = 2 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,344 | INFO     | . payload setup = 4 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,344 | INFO     | . stage-in = 0 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,344 | INFO     | . payload execution = 3999 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,344 | INFO     | . stage-out = 0 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,344 | INFO     | . log creation = 0 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,344 | INFO     | ..............................
[2025-06-05 11:02:03] 2025-06-05 15:01:44,425 | INFO     | 
[2025-06-05 11:02:03] 2025-06-05 15:01:44,426 | INFO     | job summary report
[2025-06-05 11:02:03] 2025-06-05 15:01:44,426 | INFO     | --------------------------------------------------
[2025-06-05 11:02:03] 2025-06-05 15:01:44,426 | INFO     | PanDA job id: 6668439102
[2025-06-05 11:02:03] 2025-06-05 15:01:44,426 | INFO     | task id: 44871837
[2025-06-05 11:02:03] 2025-06-05 15:01:44,426 | INFO     | errors: (none)
[2025-06-05 11:02:03] 2025-06-05 15:01:44,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:02:03] 2025-06-05 15:01:44,426 | INFO     | pilot state: finished 
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | transexitcode: 0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | exeerrorcode: 0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | exeerrordiag: 
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | exitcode: 0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | exitmsg: OK
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | cpuconsumptiontime: 30103 s
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | nevents: 400
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | neventsw: 0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | pid: 12563
[2025-06-05 11:02:03] 2025-06-05 15:01:44,427 | INFO     | pgrp: 12563
[2025-06-05 11:02:03] 2025-06-05 15:01:44,428 | INFO     | corecount: 8
[2025-06-05 11:02:03] 2025-06-05 15:01:44,428 | INFO     | event service: False
[2025-06-05 11:02:03] 2025-06-05 15:01:44,428 | INFO     | sizes: {0: 2397341, 3: 2397547, 11: 2397575, 4008: 2423448, 4010: 2432389, 4012: 2432445, 4018: 2432743}
[2025-06-05 11:02:03] 2025-06-05 15:01:44,428 | INFO     | --------------------------------------------------
[2025-06-05 11:02:03] 2025-06-05 15:01:44,428 | INFO     | 
[2025-06-05 11:02:03] 2025-06-05 15:01:44,428 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 11:02:03] 2025-06-05 15:01:44,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,446 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:02:03] 2025-06-05 15:01:44,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,448 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:02:03] 2025-06-05 15:01:44,448 | INFO     | job 6668439102 has completed (purged errors)
[2025-06-05 11:02:03] 2025-06-05 15:01:44,448 | INFO     | overall cleanup function is called
[2025-06-05 11:02:03] 2025-06-05 15:01:45,456 | INFO     | --- collectZombieJob: --- 10, [12563]
[2025-06-05 11:02:03] 2025-06-05 15:01:45,456 | INFO     | zombie collector waiting for pid 12563
[2025-06-05 11:02:03] 2025-06-05 15:01:45,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:02:03] 2025-06-05 15:01:45,457 | INFO     | collected zombie processes
[2025-06-05 11:02:03] 2025-06-05 15:01:45,457 | INFO     | will attempt to kill all subprocesses of pid=12563
[2025-06-05 11:02:03] 2025-06-05 15:01:45,552 | INFO     | process IDs to be killed: [12563] (in reverse order)
[2025-06-05 11:02:03] 2025-06-05 15:01:45,599 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:02:03] 2025-06-05 15:01:45,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:02:03] 2025-06-05 15:01:45,601 | INFO     | did not find any defunct processes belonging to 12563
[2025-06-05 11:02:03] 2025-06-05 15:01:45,604 | INFO     | did not find any defunct processes belonging to 12563
[2025-06-05 11:02:03] 2025-06-05 15:01:45,604 | INFO     | ready for new job
[2025-06-05 11:02:03] 2025-06-05 15:01:45,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:02:03] 2025-06-05 15:01:45,606 | INFO     | **************************************
[2025-06-05 11:02:03] 2025-06-05 15:01:45,606 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:02:03] 2025-06-05 15:01:45,606 | INFO     | **************************************
[2025-06-05 11:02:03] 2025-06-05 15:01:45,606 | INFO     | 
[2025-06-05 11:02:03] 2025-06-05 15:01:45,607 | INFO     | architecture information:
[2025-06-05 11:02:03] 2025-06-05 15:01:45,608 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:02:03] 2025-06-05 15:01:45,620 | INFO     | cat /etc/os-release:
[2025-06-05 11:02:03] NAME="CentOS Linux"
[2025-06-05 11:02:03] VERSION="7 (Core)"
[2025-06-05 11:02:03] ID="centos"
[2025-06-05 11:02:03] ID_LIKE="rhel fedora"
[2025-06-05 11:02:03] VERSION_ID="7"
[2025-06-05 11:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:02:03] ANSI_COLOR="0;31"
[2025-06-05 11:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:02:03] HOME_URL="https://www.centos.org/"
[2025-06-05 11:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:02:03] 
[2025-06-05 11:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:02:03] 
[2025-06-05 11:02:03] 2025-06-05 15:01:45,620 | INFO     | **************************************
[2025-06-05 11:02:03] 2025-06-05 15:01:46,123 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 11:02:03] 2025-06-05 15:01:46,137 | INFO     | sufficient remaining disk space (33290190848 B)
[2025-06-05 11:02:03] 2025-06-05 15:01:46,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:02:03] 2025-06-05 15:01:46,138 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:02:03] 2025-06-05 15:01:46,138 | INFO     | update_server=False
[2025-06-05 11:02:03] 2025-06-05 15:01:46,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:02:03] 2025-06-05 15:01:46,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:02:03] 2025-06-05 15:01:46,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:02:03] 2025-06-05 15:01:46,139 | INFO     | aborting loop
[2025-06-05 11:02:03] 2025-06-05 15:01:46,175 | INFO     | all data control threads have been joined
[2025-06-05 11:02:03] 2025-06-05 15:01:46,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:02:03] 2025-06-05 15:01:46,631 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:02:03] 2025-06-05 15:01:46,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:02:03] 2025-06-05 15:01:46,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:02:03] 2025-06-05 15:01:46,790 | INFO     | all job control threads have been joined
[2025-06-05 11:02:03] 2025-06-05 15:01:47,141 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,144 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,145 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,176 | INFO     | [data] control thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,218 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,327 | INFO     | all payload control threads have been joined
[2025-06-05 11:02:03] 2025-06-05 15:01:47,458 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,795 | INFO     | [job] control thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,923 | INFO     | [job] validate thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:47,953 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:48,197 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:48,333 | INFO     | [payload] control thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:48,343 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:48,497 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:48,570 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:48,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:02:03] 2025-06-05 15:01:52,757 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:56,515 | INFO     | job.realtimelogging is not enabled
[2025-06-05 11:02:03] 2025-06-05 15:01:57,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:02:03] 2025-06-05 15:01:57,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707335542592)>', '<ExcThread(monitor, started 140706685384448)>']
[2025-06-05 11:02:03] 2025-06-05 15:01:58,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:02:03] 2025-06-05 15:01:58,691 | INFO     | [monitor] control thread has ended
[2025-06-05 11:02:03] 2025-06-05 15:02:02,961 | INFO     | all workflow threads have been joined
[2025-06-05 11:02:03] 2025-06-05 15:02:02,962 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:02:03] 2025-06-05 15:02:02,962 | INFO     | traces error code: 0
[2025-06-05 11:02:03] 2025-06-05 15:02:02,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:02:03] 2025-06-05 15:02:03,048 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:02:03] 2025-06-05 15:02:03,051 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:02:03] 2025-06-05 15:02:03,054 [wrapper] pilotpid: 30968
[2025-06-05 11:02:03] 2025-06-05 15:02:03,058 [wrapper] Pilot exit status: 0
[2025-06-05 11:02:03] 2025-06-05 15:02:03,069 [wrapper] pandaids: 6668439102
[2025-06-05 11:02:03] 2025-06-05 15:02:03,101 [wrapper] cleanup supervisor_pilot 13259 30969
[2025-06-05 11:02:03] 2025-06-05 15:02:03,105 [wrapper] Test setup, not cleaning
[2025-06-05 11:02:03] 2025-06-05 15:02:03,108 [wrapper] apfmon messages muted
[2025-06-05 11:02:03] 2025-06-05 15:02:03,112 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:02:03] 2025-06-05 15:02:03,115 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:02:03]  *** Error codes and diagnostics ***
[2025-06-05 11:02:03]     "exeErrorCode": 0,
[2025-06-05 11:02:03]     "exeErrorDiag": "",
[2025-06-05 11:02:03]     "pilotErrorCode": 0,
[2025-06-05 11:02:03]     "pilotErrorDiag": "",
[2025-06-05 11:02:03]  *** Listing of results directory ***
[2025-06-05 11:02:03] total 420468
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas      5111 May 28 07:04 queuedata.json
[2025-06-05 11:02:03] -rwx------ 1 boincer umatlas     37140 May 28 07:04 runpilot2-wrapper.sh
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas    495897 May 28 07:04 pilot3.tar.gz
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas       100 Jun  5 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:02:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 09:54 run_atlas
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas       105 Jun  5 09:54 job.xml
[2025-06-05 11:02:03] -rw-r--r-- 2 boincer umatlas 225281971 Jun  5 09:54 EVNT.44871834._001737.pool.root.1
[2025-06-05 11:02:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 09:54 start_atlas.sh
[2025-06-05 11:02:03] drwxrwx--x 2 boincer umatlas      4096 Jun  5 09:54 shared
[2025-06-05 11:02:03] -rw-r--r-- 2 boincer umatlas    508873 Jun  5 09:54 input.tar.gz
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas         0 Jun  5 09:54 boinc_lockfile
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 09:54 pandaJob.out
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas    983210 Jun  5 09:54 agis_schedconf.cvmfs.json
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas   1598969 Jun  5 09:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:02:03] drwx------ 4 boincer umatlas      4096 Jun  5 09:54 pilot3
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas      6051 Jun  5 11:00 init_data.xml
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas        95 Jun  5 11:01 pilot_heartbeat.json
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas 200012930 Jun  5 11:01 HITS.44871837._083438.pool.root.1
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas      1046 Jun  5 11:01 memory_monitor_summary.json
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas    306771 Jun  5 11:01 log.44871837._083438.job.log.tgz.1
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 11:01 boinc_mmap_file
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas        27 Jun  5 11:01 wrapper_checkpoint.txt
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas       529 Jun  5 11:01 boinc_task_state.xml
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas      7736 Jun  5 11:01 heartbeat.json
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas      4425 Jun  5 11:02 pilotlog.txt
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas    406406 Jun  5 11:02 log.44871837._083438.job.log.1
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas       357 Jun  5 11:02 output.list
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas       620 Jun  5 11:02 runtime_log
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas    737280 Jun  5 11:02 result.tar.gz
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 11:02 runtime_log.err
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas       658 Jun  5 11:02 8VZLDmElTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjOTKDmeEgJ3m.diag
[2025-06-05 11:02:03] -rw-r--r-- 1 boincer umatlas     21244 Jun  5 11:02 stderr.txt
[2025-06-05 11:02:03] HITS file was successfully produced:
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas 200012930 Jun  5 11:01 shared/HITS.pool.root.1
[2025-06-05 11:02:03]  *** Contents of shared directory: ***
[2025-06-05 11:02:03] total 416576
[2025-06-05 11:02:03] -rw-r--r-- 2 boincer umatlas 225281971 Jun  5 09:54 ATLAS.root_0
[2025-06-05 11:02:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 09:54 start_atlas.sh
[2025-06-05 11:02:03] -rw-r--r-- 2 boincer umatlas    508873 Jun  5 09:54 input.tar.gz
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas 200012930 Jun  5 11:01 HITS.pool.root.1
[2025-06-05 11:02:03] -rw------- 1 boincer umatlas    737280 Jun  5 11:02 result.tar.gz
11:02:04 (25660): run_atlas exited; CPU time 30067.550226
11:02:04 (25660): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN