Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:41:37 (280334): wrapper (7.7.26015): starting
09:41:37 (280334): wrapper: running run_atlas (--nthreads 9)
[2025-06-05 09:41:37] Arguments: --nthreads 9
[2025-06-05 09:41:37] Threads: 9
[2025-06-05 09:41:37] Checking for CVMFS
[2025-06-05 09:41:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:41:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:41:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:41:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:41:40] 2.11.2.0 6489 30296 284136 146820 3 375 18154480 18432001 11510 130560 1 71046150 99.450 82055653 29514 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 09:41:40] CVMFS is ok
[2025-06-05 09:41:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 09:41:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 09:41:40] Further information can be found at the LHC@home message board.
[2025-06-05 09:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:41:40] Checking for apptainer binary...
[2025-06-05 09:41:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:41:40] Running /usr/bin/apptainer --version
[2025-06-05 09:41:40] apptainer version 1.3.2-1.el7
[2025-06-05 09:41:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:41:58] c-210-31-2.aglt2.org
[2025-06-05 09:41:58] apptainer works
[2025-06-05 09:41:58] Set ATHENA_PROC_NUMBER=9
[2025-06-05 09:41:58] Set ATHENA_CORE_NUMBER=9
[2025-06-05 09:41:58] Starting ATLAS job with PandaID=6668531478
[2025-06-05 09:41:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:10:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:10:02] 2025-06-05 17:09:38,331 | INFO     | monitor loop #892: job 0:6668531478 is in state 'finished'
[2025-06-05 13:10:02] 2025-06-05 17:09:38,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:10:02] 2025-06-05 17:09:40,461 | INFO     | PID=1873 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 13:10:02] 2025-06-05 17:09:40,462 | INFO     | .. there are 8 such processes running
[2025-06-05 13:10:02] 2025-06-05 17:09:40,836 | INFO     | monitor loop #893: job 0:6668531478 is in state 'finished'
[2025-06-05 13:10:02] 2025-06-05 17:09:40,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,214 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 13:10:02] 2025-06-05 17:09:41,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668531478/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,216 | INFO     | extracted standard info from prmon json
[2025-06-05 13:10:02] 2025-06-05 17:09:41,216 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:10:02] 2025-06-05 17:09:41,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:10:02] 2025-06-05 17:09:41,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:10:02] 2025-06-05 17:09:41,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:10:02] 2025-06-05 17:09:41,221 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:10:02] 2025-06-05 17:09:41,222 | INFO     | sum of square deviations: 2443566836.0603147
[2025-06-05 13:10:02] 2025-06-05 17:09:41,223 | INFO     | sum of deviations: 59568401618.55278
[2025-06-05 13:10:02] 2025-06-05 17:09:41,223 | INFO     | mean x: 1749137294.1407034
[2025-06-05 13:10:02] 2025-06-05 17:09:41,224 | INFO     | mean y: 2473169.6231155777
[2025-06-05 13:10:02] 2025-06-05 17:09:41,224 | INFO     | -- intersect: -42637372520.601456
[2025-06-05 13:10:02] 2025-06-05 17:09:41,224 | INFO     | intersect: -42637372520.601456
[2025-06-05 13:10:02] 2025-06-05 17:09:41,224 | INFO     | chi2: 4.765127134156422
[2025-06-05 13:10:02] 2025-06-05 17:09:41,225 | INFO     | sum of square deviations: 2263972008.458766
[2025-06-05 13:10:02] 2025-06-05 17:09:41,226 | INFO     | sum of deviations: 70981519069.10306
[2025-06-05 13:10:02] 2025-06-05 17:09:41,226 | INFO     | mean x: 1749137141.6443298
[2025-06-05 13:10:02] 2025-06-05 17:09:41,226 | INFO     | mean y: 2482626.6391752576
[2025-06-05 13:10:02] 2025-06-05 17:09:41,226 | INFO     | -- intersect: -54837599719.88454
[2025-06-05 13:10:02] 2025-06-05 17:09:41,227 | INFO     | intersect: -54837599719.88454
[2025-06-05 13:10:02] 2025-06-05 17:09:41,227 | INFO     | chi2: 4.021153561157178
[2025-06-05 13:10:02] 2025-06-05 17:09:41,227 | INFO     | current chi2=4.021153561157178 (change=15.612879825733147 %)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,227 | INFO     | right removable region: 193
[2025-06-05 13:10:02] 2025-06-05 17:09:41,228 | INFO     | sum of square deviations: 2263954928.458766
[2025-06-05 13:10:02] 2025-06-05 17:09:41,229 | INFO     | sum of deviations: -3105393392.381439
[2025-06-05 13:10:02] 2025-06-05 17:09:41,229 | INFO     | mean x: 1749137446.6443298
[2025-06-05 13:10:02] 2025-06-05 17:09:41,229 | INFO     | mean y: 2526242.8350515463
[2025-06-05 13:10:02] 2025-06-05 17:09:41,229 | INFO     | -- intersect: 2401761227.9917684
[2025-06-05 13:10:02] 2025-06-05 17:09:41,229 | INFO     | intersect: 2401761227.9917684
[2025-06-05 13:10:02] 2025-06-05 17:09:41,230 | INFO     | chi2: 0.9096767947791603
[2025-06-05 13:10:02] 2025-06-05 17:09:41,230 | INFO     | current chi2=0.9096767947791603 (change=80.9097056769252 %)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,231 | INFO     | sum of square deviations: 2093366445.851854
[2025-06-05 13:10:02] 2025-06-05 17:09:41,232 | INFO     | sum of deviations: -10064476472.111113
[2025-06-05 13:10:02] 2025-06-05 17:09:41,232 | INFO     | mean x: 1749137599.148148
[2025-06-05 13:10:02] 2025-06-05 17:09:41,232 | INFO     | mean y: 2532371.5396825396
[2025-06-05 13:10:02] 2025-06-05 17:09:41,232 | INFO     | -- intersect: 8412027158.271965
[2025-06-05 13:10:02] 2025-06-05 17:09:41,232 | INFO     | intersect: 8412027158.271965
[2025-06-05 13:10:02] 2025-06-05 17:09:41,233 | INFO     | chi2: 0.8190887764334984
[2025-06-05 13:10:02] 2025-06-05 17:09:41,233 | INFO     | current chi2=0.8190887764334984 (change=9.958264173118067 %)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,233 | INFO     | left removable region: 20
[2025-06-05 13:10:02] 2025-06-05 17:09:41,233 | INFO     | sum of square deviations: 1605432325.4682012
[2025-06-05 13:10:02] 2025-06-05 17:09:41,235 | INFO     | sum of deviations: 6364599236.231212
[2025-06-05 13:10:02] 2025-06-05 17:09:41,235 | INFO     | mean x: 1749137721.1618497
[2025-06-05 13:10:02] 2025-06-05 17:09:41,235 | INFO     | mean y: 2539724.2774566473
[2025-06-05 13:10:02] 2025-06-05 17:09:41,235 | INFO     | -- intersect: -6931767270.5211315
[2025-06-05 13:10:02] 2025-06-05 17:09:41,235 | INFO     | intersect: -6931767270.5211315
[2025-06-05 13:10:02] 2025-06-05 17:09:41,235 | INFO     | chi2: 0.004228069446354247
[2025-06-05 13:10:02] 2025-06-05 17:09:41,236 | INFO     | -- intersect: -6931767270.5211315
[2025-06-05 13:10:02] 2025-06-05 17:09:41,236 | INFO     | current memory leak: 3.96 B/s (using 173 data points, chi2=0.00)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,236 | INFO     | ..............................
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . Timing measurements:
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . get job = 0 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . initial setup = 5 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . payload setup = 90 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . stage-in = 0 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . payload execution = 12172 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . stage-out = 2 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | . log creation = 0 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,237 | INFO     | ..............................
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | 
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | job summary report
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | --------------------------------------------------
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | PanDA job id: 6668531478
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | task id: 44871837
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | errors: (none)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | pilot state: finished 
[2025-06-05 13:10:02] 2025-06-05 17:09:41,422 | INFO     | transexitcode: 0
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | exeerrorcode: 0
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | exeerrordiag: 
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | exitcode: 0
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | exitmsg: OK
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | cpuconsumptiontime: 52764 s
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | nevents: 400
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | neventsw: 0
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | pid: 16088
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | pgrp: 16088
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | corecount: 9
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | event service: False
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | sizes: {0: 2397221, 1: 2397420, 12: 2397420, 23: 2397448, 34: 2397476, 43: 2397710, 44: 2397866, 12265: 2427395, 12269: 2436336, 12271: 2436392, 12282: 2436562}
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | --------------------------------------------------
[2025-06-05 13:10:02] 2025-06-05 17:09:41,423 | INFO     | 
[2025-06-05 13:10:02] 2025-06-05 17:09:41,424 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 13:10:02] 2025-06-05 17:09:41,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | job 6668531478 has completed (purged errors)
[2025-06-05 13:10:02] 2025-06-05 17:09:41,480 | INFO     | overall cleanup function is called
[2025-06-05 13:10:02] 2025-06-05 17:09:42,510 | INFO     | --- collectZombieJob: --- 10, [16088]
[2025-06-05 13:10:02] 2025-06-05 17:09:42,510 | INFO     | zombie collector waiting for pid 16088
[2025-06-05 13:10:02] 2025-06-05 17:09:42,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:10:02] 2025-06-05 17:09:42,510 | INFO     | collected zombie processes
[2025-06-05 13:10:02] 2025-06-05 17:09:42,510 | INFO     | will attempt to kill all subprocesses of pid=16088
[2025-06-05 13:10:02] 2025-06-05 17:09:42,720 | INFO     | process IDs to be killed: [16088] (in reverse order)
[2025-06-05 13:10:02] 2025-06-05 17:09:42,800 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:10:02] 2025-06-05 17:09:42,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:10:02] 2025-06-05 17:09:42,804 | INFO     | did not find any defunct processes belonging to 16088
[2025-06-05 13:10:02] 2025-06-05 17:09:42,809 | INFO     | did not find any defunct processes belonging to 16088
[2025-06-05 13:10:02] 2025-06-05 17:09:42,809 | INFO     | ready for new job
[2025-06-05 13:10:02] 2025-06-05 17:09:42,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:10:02] 2025-06-05 17:09:42,811 | INFO     | **************************************
[2025-06-05 13:10:02] 2025-06-05 17:09:42,811 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:10:02] 2025-06-05 17:09:42,811 | INFO     | **************************************
[2025-06-05 13:10:02] 2025-06-05 17:09:42,811 | INFO     | 
[2025-06-05 13:10:02] 2025-06-05 17:09:42,813 | INFO     | architecture information:
[2025-06-05 13:10:02] 2025-06-05 17:09:42,813 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:10:02] 2025-06-05 17:09:42,859 | INFO     | cat /etc/os-release:
[2025-06-05 13:10:02] NAME="CentOS Linux"
[2025-06-05 13:10:02] VERSION="7 (Core)"
[2025-06-05 13:10:02] ID="centos"
[2025-06-05 13:10:02] ID_LIKE="rhel fedora"
[2025-06-05 13:10:02] VERSION_ID="7"
[2025-06-05 13:10:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:10:02] ANSI_COLOR="0;31"
[2025-06-05 13:10:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:10:02] HOME_URL="https://www.centos.org/"
[2025-06-05 13:10:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:10:02] 
[2025-06-05 13:10:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:10:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:10:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:10:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:10:02] 
[2025-06-05 13:10:02] 2025-06-05 17:09:42,859 | INFO     | **************************************
[2025-06-05 13:10:02] 2025-06-05 17:09:43,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 13:10:02] 2025-06-05 17:09:43,416 | INFO     | sufficient remaining disk space (57358155776 B)
[2025-06-05 13:10:02] 2025-06-05 17:09:43,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:10:02] 2025-06-05 17:09:43,417 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:10:02] 2025-06-05 17:09:43,417 | INFO     | update_server=False
[2025-06-05 13:10:02] 2025-06-05 17:09:43,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:10:02] 2025-06-05 17:09:43,418 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:10:02] 2025-06-05 17:09:43,418 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:10:02] 2025-06-05 17:09:43,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:10:02] 2025-06-05 17:09:43,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:10:02] 2025-06-05 17:09:43,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:10:02] 2025-06-05 17:09:43,582 | INFO     | all data control threads have been joined
[2025-06-05 13:10:02] 2025-06-05 17:09:44,128 | INFO     | all payload control threads have been joined
[2025-06-05 13:10:02] 2025-06-05 17:09:44,311 | INFO     | all job control threads have been joined
[2025-06-05 13:10:02] 2025-06-05 17:09:44,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:10:02] 2025-06-05 17:09:44,341 | INFO     | aborting loop
[2025-06-05 13:10:02] 2025-06-05 17:09:44,423 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:44,497 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:44,539 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:44,587 | INFO     | [data] control thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:44,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:10:02] 2025-06-05 17:09:44,886 | INFO     | [job] validate thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,133 | INFO     | [payload] control thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,199 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,306 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,316 | INFO     | [job] control thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,345 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,425 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,480 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:45,938 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:46,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:10:02] 2025-06-05 17:09:47,348 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:48,766 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:53,727 | INFO     | job.realtimelogging is not enabled
[2025-06-05 13:10:02] 2025-06-05 17:09:54,733 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:10:02] 2025-06-05 17:09:56,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633195403072)>', '<ExcThread(monitor, started 140632890779392)>']
[2025-06-05 13:10:02] 2025-06-05 17:09:57,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:10:02] 2025-06-05 17:09:57,485 | INFO     | [monitor] control thread has ended
[2025-06-05 13:10:02] 2025-06-05 17:10:01,588 | INFO     | all workflow threads have been joined
[2025-06-05 13:10:02] 2025-06-05 17:10:01,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:10:02] 2025-06-05 17:10:01,588 | INFO     | traces error code: 0
[2025-06-05 13:10:02] 2025-06-05 17:10:01,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:10:02] 2025-06-05 17:10:01,877 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:10:02] 2025-06-05 17:10:01,880 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:10:02] 2025-06-05 17:10:01,884 [wrapper] pilotpid: 1873
[2025-06-05 13:10:02] 2025-06-05 17:10:01,887 [wrapper] Pilot exit status: 0
[2025-06-05 13:10:02] 2025-06-05 17:10:01,970 [wrapper] pandaids: 6668531478
[2025-06-05 13:10:02] 2025-06-05 17:10:02,046 [wrapper] cleanup supervisor_pilot 270211 1874
[2025-06-05 13:10:02] 2025-06-05 17:10:02,051 [wrapper] Test setup, not cleaning
[2025-06-05 13:10:02] 2025-06-05 17:10:02,054 [wrapper] apfmon messages muted
[2025-06-05 13:10:02] 2025-06-05 17:10:02,057 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:10:02] 2025-06-05 17:10:02,060 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:10:02]  *** Error codes and diagnostics ***
[2025-06-05 13:10:02]     "exeErrorCode": 0,
[2025-06-05 13:10:02]     "exeErrorDiag": "",
[2025-06-05 13:10:02]     "pilotErrorCode": 0,
[2025-06-05 13:10:02]     "pilotErrorDiag": "",
[2025-06-05 13:10:02]  *** Listing of results directory ***
[2025-06-05 13:10:02] total 427040
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas    495897 May 28 09:51 pilot3.tar.gz
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas      5111 May 28 09:52 queuedata.json
[2025-06-05 13:10:02] -rwx------ 1 boincer umatlas     37140 May 28 09:52 runpilot2-wrapper.sh
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas       100 Jun  5 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:10:02] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 09:41 run_atlas
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas       105 Jun  5 09:41 job.xml
[2025-06-05 13:10:02] -rw-r--r-- 2 boincer umatlas 223962401 Jun  5 09:41 EVNT.44871834._003323.pool.root.1
[2025-06-05 13:10:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 09:41 start_atlas.sh
[2025-06-05 13:10:02] drwxrwx--x 2 boincer umatlas      4096 Jun  5 09:41 shared
[2025-06-05 13:10:02] -rw-r--r-- 2 boincer umatlas    508879 Jun  5 09:41 input.tar.gz
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas         0 Jun  5 09:41 boinc_lockfile
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 09:41 pandaJob.out
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas    983210 Jun  5 09:43 agis_schedconf.cvmfs.json
[2025-06-05 13:10:02] drwx------ 4 boincer umatlas      4096 Jun  5 09:43 pilot3
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas      6356 Jun  5 13:00 init_data.xml
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas 206485397 Jun  5 13:08 HITS.44871837._085235.pool.root.1
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas       530 Jun  5 13:08 boinc_task_state.xml
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas        95 Jun  5 13:09 pilot_heartbeat.json
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas      1059 Jun  5 13:09 memory_monitor_summary.json
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas   1598969 Jun  5 13:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas    402529 Jun  5 13:09 log.44871837._085235.job.log.tgz.1
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas      7759 Jun  5 13:09 heartbeat.json
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas        28 Jun  5 13:09 wrapper_checkpoint.txt
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 13:09 boinc_mmap_file
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas      4548 Jun  5 13:10 pilotlog.txt
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas   1103960 Jun  5 13:10 log.44871837._085235.job.log.1
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas       357 Jun  5 13:10 output.list
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas       620 Jun  5 13:10 runtime_log
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas   1525760 Jun  5 13:10 result.tar.gz
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 13:10 runtime_log.err
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas       663 Jun  5 13:10 MD4NDm5NWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvHcKDmiWI7hm.diag
[2025-06-05 13:10:02] -rw-r--r-- 1 boincer umatlas     13250 Jun  5 13:10 stderr.txt
[2025-06-05 13:10:02] HITS file was successfully produced:
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas 206485397 Jun  5 13:08 shared/HITS.pool.root.1
[2025-06-05 13:10:02]  *** Contents of shared directory: ***
[2025-06-05 13:10:02] total 422380
[2025-06-05 13:10:02] -rw-r--r-- 2 boincer umatlas 223962401 Jun  5 09:41 ATLAS.root_0
[2025-06-05 13:10:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 09:41 start_atlas.sh
[2025-06-05 13:10:02] -rw-r--r-- 2 boincer umatlas    508879 Jun  5 09:41 input.tar.gz
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas 206485397 Jun  5 13:08 HITS.pool.root.1
[2025-06-05 13:10:02] -rw------- 1 boincer umatlas   1525760 Jun  5 13:10 result.tar.gz
13:10:04 (280334): run_atlas exited; CPU time 52950.987244
13:10:04 (280334): called boinc_finish(0)

</stderr_txt>
]]>

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