Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:36:38 (7777): wrapper (7.7.26015): starting
09:36:38 (7777): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 09:36:38] Arguments: --nthreads 12
[2025-06-05 09:36:38] Threads: 12
[2025-06-05 09:36:38] Checking for CVMFS
[2025-06-05 09:36:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:36:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:36:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:36:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:36:38] 2.11.2.0 2984 37144 87728 146820 2 1 18226279 20275200 1 130560 0 16730555 99.983 6700785 8111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 09:36:38] CVMFS is ok
[2025-06-05 09:36:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 09:36:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 09:36:38] Further information can be found at the LHC@home message board.
[2025-06-05 09:36:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:36:38] Checking for apptainer binary...
[2025-06-05 09:36:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:36:38] Running /usr/bin/apptainer --version
[2025-06-05 09:36:38] apptainer version 1.3.2-1.el7
[2025-06-05 09:36:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:36:40] c-205-26.aglt2.org
[2025-06-05 09:36:40] apptainer works
[2025-06-05 09:36:40] Set ATHENA_PROC_NUMBER=12
[2025-06-05 09:36:40] Set ATHENA_CORE_NUMBER=12
[2025-06-05 09:36:40] Starting ATLAS job with PandaID=6667930981
[2025-06-05 09:36:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:13:12]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:13:12]  guid=868c55fc-04df-4960-8e7f-79cb7b8927be
[2025-06-05 11:13:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 11:13:12]  is_altstaged=None
[2025-06-05 11:13:12]  is_tar=False
[2025-06-05 11:13:12]  lfn=log.44871837._078674.job.log.tgz.1
[2025-06-05 11:13:12]  mtime=0
[2025-06-05 11:13:12]  protocol_id=None
[2025-06-05 11:13:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 11:13:12]  replicas=None
[2025-06-05 11:13:12]  scope=mc23_13p6TeV
[2025-06-05 11:13:12]  status=None
[2025-06-05 11:13:12]  status_code=0
[2025-06-05 11:13:12]  storage_token=
[2025-06-05 11:13:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667930981/log.44871837._078674.job.log.tgz.1
[2025-06-05 11:13:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/70/log.44871837._078674.job.log.tgz.1
[2025-06-05 11:13:12]  workdir=None
[2025-06-05 11:13:12] ]
[2025-06-05 11:13:12] 2025-06-05 15:12:52,187 | INFO     | transferring file log.44871837._078674.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667930981/log.44871837._078674.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 11:13:12] 2025-06-05 15:12:52,187 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667930981/log.44871837._078674.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._078674.job
[2025-06-05 11:13:12] 2025-06-05 15:12:52,208 | INFO     | adding to output.list: log.44871837._078674.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/70/log.44871837._078674.job.log.tg
[2025-06-05 11:13:12] 2025-06-05 15:12:52,209 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 11:13:12] 2025-06-05 15:12:52,209 | INFO     | summary of transferred files:
[2025-06-05 11:13:12] 2025-06-05 15:12:52,209 | INFO     |  -- lfn=log.44871837._078674.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 11:13:12] 2025-06-05 15:12:52,209 | INFO     | stage-out finished correctly
[2025-06-05 11:13:12] 2025-06-05 15:12:52,294 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 11:13:12] 2025-06-05 15:12:52,965 | INFO     | monitor loop #432: job 0:6667930981 is in state 'finished'
[2025-06-05 11:13:12] 2025-06-05 15:12:52,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:13:12] 2025-06-05 15:12:53,359 | INFO     | job 6667930981 has state=finished
[2025-06-05 11:13:12] 2025-06-05 15:12:53,359 | INFO     | preparing for final server update for job 6667930981 in state='finished'
[2025-06-05 11:13:12] 2025-06-05 15:12:53,360 | INFO     | this job has now completed (state=finished)
[2025-06-05 11:13:12] 2025-06-05 15:12:53,360 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 11:13:12] 2025-06-05 15:12:53,360 | INFO     | log transfer has been attempted: DONE
[2025-06-05 11:13:12] 2025-06-05 15:12:53,360 | INFO     | job 6667930981 has finished - writing final server update
[2025-06-05 11:13:12] 2025-06-05 15:12:53,361 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:13:12] 2025-06-05 15:12:53,362 | INFO     | executing command: lscpu
[2025-06-05 11:13:12] 2025-06-05 15:12:53,388 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:13:12] 2025-06-05 15:12:55,468 | INFO     | monitor loop #433: job 0:6667930981 is in state 'finished'
[2025-06-05 11:13:12] 2025-06-05 15:12:55,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:13:12] 2025-06-05 15:12:57,961 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 11:13:12] 2025-06-05 15:12:57,962 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667930981/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:13:12] 2025-06-05 15:12:57,963 | INFO     | extracted standard info from prmon json
[2025-06-05 11:13:12] 2025-06-05 15:12:57,963 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:13:12] 2025-06-05 15:12:57,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:13:12] 2025-06-05 15:12:57,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:13:12] 2025-06-05 15:12:57,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:13:12] 2025-06-05 15:12:57,966 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:13:12] 2025-06-05 15:12:57,967 | INFO     | sum of square deviations: 204163828.0
[2025-06-05 11:13:12] 2025-06-05 15:12:57,967 | INFO     | sum of deviations: -7184126159.999999
[2025-06-05 11:13:12] 2025-06-05 15:12:57,967 | INFO     | mean x: 1749133574.0
[2025-06-05 11:13:12] 2025-06-05 15:12:57,967 | INFO     | mean y: 2740093.1379310344
[2025-06-05 11:13:12] 2025-06-05 15:12:57,967 | INFO     | -- intersect: 61551332659.23977
[2025-06-05 11:13:12] 2025-06-05 15:12:57,968 | INFO     | intersect: 61551332659.23977
[2025-06-05 11:13:12] 2025-06-05 15:12:57,968 | INFO     | chi2: 0.1435469634331252
[2025-06-05 11:13:12] 2025-06-05 15:12:57,968 | INFO     | -- intersect: 61551332659.23977
[2025-06-05 11:13:12] 2025-06-05 15:12:57,968 | INFO     | current memory leak: -35.19 B/s (using 87 data points, chi2=0.14)
[2025-06-05 11:13:12] 2025-06-05 15:12:57,968 | INFO     | ..............................
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . Timing measurements:
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . get job = 0 s
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . initial setup = 2 s
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . payload setup = 10 s
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . stage-in = 0 s
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . payload execution = 5726 s
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . stage-out = 0 s
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | . log creation = 0 s
[2025-06-05 11:13:12] 2025-06-05 15:12:57,969 | INFO     | ..............................
[2025-06-05 11:13:12] 2025-06-05 15:12:58,292 | INFO     | 
[2025-06-05 11:13:12] 2025-06-05 15:12:58,293 | INFO     | job summary report
[2025-06-05 11:13:12] 2025-06-05 15:12:58,293 | INFO     | --------------------------------------------------
[2025-06-05 11:13:12] 2025-06-05 15:12:58,293 | INFO     | PanDA job id: 6667930981
[2025-06-05 11:13:12] 2025-06-05 15:12:58,293 | INFO     | task id: 44871837
[2025-06-05 11:13:12] 2025-06-05 15:12:58,293 | INFO     | errors: (none)
[2025-06-05 11:13:12] 2025-06-05 15:12:58,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:13:12] 2025-06-05 15:12:58,294 | INFO     | pilot state: finished 
[2025-06-05 11:13:12] 2025-06-05 15:12:58,294 | INFO     | transexitcode: 0
[2025-06-05 11:13:12] 2025-06-05 15:12:58,294 | INFO     | exeerrorcode: 0
[2025-06-05 11:13:12] 2025-06-05 15:12:58,294 | INFO     | exeerrordiag: 
[2025-06-05 11:13:12] 2025-06-05 15:12:58,294 | INFO     | exitcode: 0
[2025-06-05 11:13:12] 2025-06-05 15:12:58,294 | INFO     | exitmsg: OK
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | cpuconsumptiontime: 60678 s
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | nevents: 400
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | neventsw: 0
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | pid: 17841
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | pgrp: 17841
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | corecount: 12
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | event service: False
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | sizes: {0: 2397165, 1: 2397420, 6: 2397626, 12: 2397654, 5740: 2424154, 5741: 2433279, 5747: 2433393}
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | --------------------------------------------------
[2025-06-05 11:13:12] 2025-06-05 15:12:58,295 | INFO     | 
[2025-06-05 11:13:12] 2025-06-05 15:12:58,296 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 11:13:12] 2025-06-05 15:12:58,317 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,318 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,318 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,320 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:13:12] 2025-06-05 15:12:58,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,321 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:13:12] 2025-06-05 15:12:58,321 | INFO     | job 6667930981 has completed (purged errors)
[2025-06-05 11:13:12] 2025-06-05 15:12:58,321 | INFO     | overall cleanup function is called
[2025-06-05 11:13:12] 2025-06-05 15:12:59,329 | INFO     | --- collectZombieJob: --- 10, [17841]
[2025-06-05 11:13:12] 2025-06-05 15:12:59,330 | INFO     | zombie collector waiting for pid 17841
[2025-06-05 11:13:12] 2025-06-05 15:12:59,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:13:12] 2025-06-05 15:12:59,330 | INFO     | collected zombie processes
[2025-06-05 11:13:12] 2025-06-05 15:12:59,330 | INFO     | will attempt to kill all subprocesses of pid=17841
[2025-06-05 11:13:12] 2025-06-05 15:12:59,428 | INFO     | process IDs to be killed: [17841] (in reverse order)
[2025-06-05 11:13:12] 2025-06-05 15:12:59,478 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:13:12] 2025-06-05 15:12:59,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:13:12] 2025-06-05 15:12:59,482 | INFO     | did not find any defunct processes belonging to 17841
[2025-06-05 11:13:12] 2025-06-05 15:12:59,486 | INFO     | did not find any defunct processes belonging to 17841
[2025-06-05 11:13:12] 2025-06-05 15:12:59,486 | INFO     | ready for new job
[2025-06-05 11:13:12] 2025-06-05 15:12:59,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:13:12] 2025-06-05 15:12:59,487 | INFO     | **************************************
[2025-06-05 11:13:12] 2025-06-05 15:12:59,487 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:13:12] 2025-06-05 15:12:59,487 | INFO     | **************************************
[2025-06-05 11:13:12] 2025-06-05 15:12:59,487 | INFO     | 
[2025-06-05 11:13:12] 2025-06-05 15:12:59,488 | INFO     | architecture information:
[2025-06-05 11:13:12] 2025-06-05 15:12:59,488 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:13:12] 2025-06-05 15:12:59,502 | INFO     | cat /etc/os-release:
[2025-06-05 11:13:12] NAME="CentOS Linux"
[2025-06-05 11:13:12] VERSION="7 (Core)"
[2025-06-05 11:13:12] ID="centos"
[2025-06-05 11:13:12] ID_LIKE="rhel fedora"
[2025-06-05 11:13:12] VERSION_ID="7"
[2025-06-05 11:13:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:13:12] ANSI_COLOR="0;31"
[2025-06-05 11:13:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:13:12] HOME_URL="https://www.centos.org/"
[2025-06-05 11:13:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:13:12] 
[2025-06-05 11:13:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:13:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:13:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:13:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:13:12] 
[2025-06-05 11:13:12] 2025-06-05 15:12:59,502 | INFO     | **************************************
[2025-06-05 11:13:12] 2025-06-05 15:13:00,005 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 11:13:12] 2025-06-05 15:13:00,021 | INFO     | sufficient remaining disk space (29387390976 B)
[2025-06-05 11:13:12] 2025-06-05 15:13:00,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:13:12] 2025-06-05 15:13:00,021 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:13:12] 2025-06-05 15:13:00,022 | INFO     | update_server=False
[2025-06-05 11:13:12] 2025-06-05 15:13:00,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:13:12] 2025-06-05 15:13:00,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:13:12] 2025-06-05 15:13:00,022 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 11:13:12] 2025-06-05 15:13:00,023 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:13:12] 2025-06-05 15:13:00,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:13:12] 2025-06-05 15:13:00,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:13:12] 2025-06-05 15:13:00,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:13:12] 2025-06-05 15:13:00,307 | INFO     | all data control threads have been joined
[2025-06-05 11:13:12] 2025-06-05 15:13:00,325 | INFO     | all payload control threads have been joined
[2025-06-05 11:13:12] 2025-06-05 15:13:00,479 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 11:13:12] 2025-06-05 15:13:00,479 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 11:13:12] 2025-06-05 15:13:00,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:13:12] 2025-06-05 15:13:00,480 | INFO     | will abort loop
[2025-06-05 11:13:12] 2025-06-05 15:13:00,832 | INFO     | all job control threads have been joined
[2025-06-05 11:13:12] 2025-06-05 15:13:01,027 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,028 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,246 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,271 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,311 | INFO     | [data] control thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,327 | INFO     | [payload] control thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,454 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,481 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,777 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:01,838 | INFO     | [job] control thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:02,051 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:02,309 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:02,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:02,493 | INFO     | [job] validate thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:02,495 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:02,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:13:12] 2025-06-05 15:13:06,891 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:13:12] 2025-06-05 15:13:06,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331289413440)>', '<ExcThread(monitor, started 140330313697024)>']
[2025-06-05 11:13:12] 2025-06-05 15:13:07,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:13:12] 2025-06-05 15:13:07,056 | INFO     | [monitor] control thread has ended
[2025-06-05 11:13:12] 2025-06-05 15:13:11,927 | INFO     | all workflow threads have been joined
[2025-06-05 11:13:12] 2025-06-05 15:13:11,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:13:12] 2025-06-05 15:13:11,966 | INFO     | traces error code: 0
[2025-06-05 11:13:12] 2025-06-05 15:13:11,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:13:12] 2025-06-05 15:13:12,055 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:13:12] 2025-06-05 15:13:12,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:13:12] 2025-06-05 15:13:12,063 [wrapper] pilotpid: 11389
[2025-06-05 11:13:12] 2025-06-05 15:13:12,067 [wrapper] Pilot exit status: 0
[2025-06-05 11:13:12] 2025-06-05 15:13:12,083 [wrapper] pandaids: 6667930981
[2025-06-05 11:13:12] 2025-06-05 15:13:12,123 [wrapper] cleanup supervisor_pilot 17994 11390
[2025-06-05 11:13:12] 2025-06-05 15:13:12,127 [wrapper] Test setup, not cleaning
[2025-06-05 11:13:12] 2025-06-05 15:13:12,131 [wrapper] apfmon messages muted
[2025-06-05 11:13:12] 2025-06-05 15:13:12,135 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:13:12] 2025-06-05 15:13:12,139 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:13:12]  *** Error codes and diagnostics ***
[2025-06-05 11:13:12]     "exeErrorCode": 0,
[2025-06-05 11:13:12]     "exeErrorDiag": "",
[2025-06-05 11:13:12]     "pilotErrorCode": 0,
[2025-06-05 11:13:12]     "pilotErrorDiag": "",
[2025-06-05 11:13:12]  *** Listing of results directory ***
[2025-06-05 11:13:12] total 415720
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas      5111 May 28 00:36 queuedata.json
[2025-06-05 11:13:12] -rwx------ 1 boincer umatlas     37140 May 28 00:37 runpilot2-wrapper.sh
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas       100 Jun  5 09:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:13:12] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 09:36 run_atlas
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas       105 Jun  5 09:36 job.xml
[2025-06-05 11:13:12] -rw-r--r-- 2 boincer umatlas 222130878 Jun  5 09:36 EVNT.44871834._003076.pool.root.1
[2025-06-05 11:13:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 09:36 start_atlas.sh
[2025-06-05 11:13:12] drwxrwx--x 2 boincer umatlas      4096 Jun  5 09:36 shared
[2025-06-05 11:13:12] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 09:36 input.tar.gz
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas         0 Jun  5 09:36 boinc_lockfile
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 09:36 pandaJob.out
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas    983210 Jun  5 09:36 agis_schedconf.cvmfs.json
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas   1598969 Jun  5 09:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:13:12] drwx------ 4 boincer umatlas      4096 Jun  5 09:36 pilot3
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas      5868 Jun  5 11:12 init_data.xml
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas        95 Jun  5 11:12 pilot_heartbeat.json
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas 197912952 Jun  5 11:12 HITS.44871837._078674.pool.root.1
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas       530 Jun  5 11:12 boinc_task_state.xml
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas      1047 Jun  5 11:12 memory_monitor_summary.json
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas    368630 Jun  5 11:12 log.44871837._078674.job.log.tgz.1
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas      7751 Jun  5 11:12 heartbeat.json
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 11:13 boinc_mmap_file
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas        27 Jun  5 11:13 wrapper_checkpoint.txt
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas      4662 Jun  5 11:13 pilotlog.txt
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas    540262 Jun  5 11:13 log.44871837._078674.job.log.1
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas       357 Jun  5 11:13 output.list
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas       620 Jun  5 11:13 runtime_log
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas    931840 Jun  5 11:13 result.tar.gz
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas       659 Jun  5 11:13 sW9KDmPiNe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiuSKDmrvmTMm.diag
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 11:13 runtime_log.err
[2025-06-05 11:13:12] -rw-r--r-- 1 boincer umatlas     21271 Jun  5 11:13 stderr.txt
[2025-06-05 11:13:12] HITS file was successfully produced:
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas 197912952 Jun  5 11:12 shared/HITS.pool.root.1
[2025-06-05 11:13:12]  *** Contents of shared directory: ***
[2025-06-05 11:13:12] total 411640
[2025-06-05 11:13:12] -rw-r--r-- 2 boincer umatlas 222130878 Jun  5 09:36 ATLAS.root_0
[2025-06-05 11:13:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 09:36 start_atlas.sh
[2025-06-05 11:13:12] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 09:36 input.tar.gz
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas 197912952 Jun  5 11:12 HITS.pool.root.1
[2025-06-05 11:13:12] -rw------- 1 boincer umatlas    931840 Jun  5 11:13 result.tar.gz
11:13:13 (7777): run_atlas exited; CPU time 60655.651508
11:13:13 (7777): called boinc_finish(0)

</stderr_txt>
]]>

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