Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:23:06 (3723459): wrapper (7.7.26015): starting
09:23:06 (3723459): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 09:23:06] Arguments: --nthreads 8
[2025-06-05 09:23:06] Threads: 8
[2025-06-05 09:23:06] Checking for CVMFS
[2025-06-05 09:23:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:23:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:23:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:23:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:23:07] 2.12.6.0 7995 2833 177092 146820 2 14 28994428 32935936 19397 16776704 0 22746234 99.939 2712045 33708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 09:23:07] CVMFS is ok
[2025-06-05 09:23:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 09:23:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 09:23:08] Further information can be found at the LHC@home message board.
[2025-06-05 09:23:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:23:08] Checking for apptainer binary...
[2025-06-05 09:23:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:23:08] Running /usr/bin/apptainer --version
[2025-06-05 09:23:08] apptainer version 1.4.1-1.el9
[2025-06-05 09:23:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:23:08] c6-8-25-2.aglt2.org
[2025-06-05 09:23:08] apptainer works
[2025-06-05 09:23:08] Set ATHENA_PROC_NUMBER=8
[2025-06-05 09:23:08] Set ATHENA_CORE_NUMBER=8
[2025-06-05 09:23:08] Starting ATLAS job with PandaID=6668989338
[2025-06-05 09:23:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:12:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:12:07] 2025-06-05 16:11:43,605 | INFO     | .. there are 14 such processes running
[2025-06-05 12:12:07] 2025-06-05 16:11:44,178 | INFO     | monitor loop #684: job 0:6668989338 is in state 'finished'
[2025-06-05 12:12:07] 2025-06-05 16:11:44,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,681 | INFO     | monitor loop #685: job 0:6668989338 is in state 'finished'
[2025-06-05 12:12:07] 2025-06-05 16:11:46,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,764 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 12:12:07] 2025-06-05 16:11:46,764 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668989338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,765 | INFO     | extracted standard info from prmon json
[2025-06-05 12:12:07] 2025-06-05 16:11:46,765 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:12:07] 2025-06-05 16:11:46,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:12:07] 2025-06-05 16:11:46,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:12:07] 2025-06-05 16:11:46,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:12:07] 2025-06-05 16:11:46,769 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:12:07] 2025-06-05 16:11:46,769 | INFO     | sum of square deviations: 1367691192.7804873
[2025-06-05 12:12:07] 2025-06-05 16:11:46,771 | INFO     | sum of deviations: -33470590863.853645
[2025-06-05 12:12:07] 2025-06-05 16:11:46,771 | INFO     | mean x: 1749134873.5365853
[2025-06-05 12:12:07] 2025-06-05 16:11:46,771 | INFO     | mean y: 2259690.725609756
[2025-06-05 12:12:07] 2025-06-05 16:11:46,771 | INFO     | -- intersect: 42807666369.42297
[2025-06-05 12:12:07] 2025-06-05 16:11:46,771 | INFO     | intersect: 42807666369.42297
[2025-06-05 12:12:07] 2025-06-05 16:11:46,771 | INFO     | chi2: 2.0498369885312195
[2025-06-05 12:12:07] 2025-06-05 16:11:46,772 | INFO     | sum of square deviations: 1246369817.7735808
[2025-06-05 12:12:07] 2025-06-05 16:11:46,772 | INFO     | sum of deviations: -26846269588.679237
[2025-06-05 12:12:07] 2025-06-05 16:11:46,773 | INFO     | mean x: 1749134721.037736
[2025-06-05 12:12:07] 2025-06-05 16:11:46,773 | INFO     | mean y: 2267974.113207547
[2025-06-05 12:12:07] 2025-06-05 16:11:46,773 | INFO     | -- intersect: 37677877250.1626
[2025-06-05 12:12:07] 2025-06-05 16:11:46,773 | INFO     | intersect: 37677877250.1626
[2025-06-05 12:12:07] 2025-06-05 16:11:46,773 | INFO     | chi2: 2.028046550335831
[2025-06-05 12:12:07] 2025-06-05 16:11:46,773 | INFO     | current chi2=2.028046550335831 (change=1.0630327346664885 %)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,773 | INFO     | right removable region: 158
[2025-06-05 12:12:07] 2025-06-05 16:11:46,774 | INFO     | sum of square deviations: 1246366157.7735808
[2025-06-05 12:12:07] 2025-06-05 16:11:46,774 | INFO     | sum of deviations: -57427697888.20754
[2025-06-05 12:12:07] 2025-06-05 16:11:46,775 | INFO     | mean x: 1749135026.037736
[2025-06-05 12:12:07] 2025-06-05 16:11:46,775 | INFO     | mean y: 2289457.867924528
[2025-06-05 12:12:07] 2025-06-05 16:11:46,775 | INFO     | -- intersect: 80595618484.39706
[2025-06-05 12:12:07] 2025-06-05 16:11:46,775 | INFO     | intersect: 80595618484.39706
[2025-06-05 12:12:07] 2025-06-05 16:11:46,775 | INFO     | chi2: 0.4371899803490991
[2025-06-05 12:12:07] 2025-06-05 16:11:46,775 | INFO     | current chi2=0.4371899803490991 (change=78.67196353684879 %)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,775 | INFO     | sum of square deviations: 1132436610.2662396
[2025-06-05 12:12:07] 2025-06-05 16:11:46,776 | INFO     | sum of deviations: -57275035964.948044
[2025-06-05 12:12:07] 2025-06-05 16:11:46,776 | INFO     | mean x: 1749135178.538961
[2025-06-05 12:12:07] 2025-06-05 16:11:46,776 | INFO     | mean y: 2289168.324675325
[2025-06-05 12:12:07] 2025-06-05 16:11:46,777 | INFO     | -- intersect: 88467974002.39388
[2025-06-05 12:12:07] 2025-06-05 16:11:46,777 | INFO     | intersect: 88467974002.39388
[2025-06-05 12:12:07] 2025-06-05 16:11:46,777 | INFO     | chi2: 0.3683499074443316
[2025-06-05 12:12:07] 2025-06-05 16:11:46,777 | INFO     | current chi2=0.3683499074443316 (change=15.746031702235777 %)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,777 | INFO     | left removable region: 20
[2025-06-05 12:12:07] 2025-06-05 16:11:46,777 | INFO     | sum of square deviations: 814863838.3188378
[2025-06-05 12:12:07] 2025-06-05 16:11:46,778 | INFO     | sum of deviations: -38577442400.333336
[2025-06-05 12:12:07] 2025-06-05 16:11:46,778 | INFO     | mean x: 1749135300.536232
[2025-06-05 12:12:07] 2025-06-05 16:11:46,778 | INFO     | mean y: 2281014.6666666665
[2025-06-05 12:12:07] 2025-06-05 16:11:46,778 | INFO     | -- intersect: 82810184781.8037
[2025-06-05 12:12:07] 2025-06-05 16:11:46,778 | INFO     | intersect: 82810184781.8037
[2025-06-05 12:12:07] 2025-06-05 16:11:46,779 | INFO     | chi2: 0.33755582434224923
[2025-06-05 12:12:07] 2025-06-05 16:11:46,779 | INFO     | -- intersect: 82810184781.8037
[2025-06-05 12:12:07] 2025-06-05 16:11:46,779 | INFO     | current memory leak: -47.34 B/s (using 138 data points, chi2=0.34)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | ..............................
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . Timing measurements:
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . get job = 0 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . initial setup = 3 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . payload setup = 21 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . stage-in = 0 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . payload execution = 10013 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . stage-out = 0 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | . log creation = 0 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,780 | INFO     | ..............................
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | 
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | job summary report
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | --------------------------------------------------
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | PanDA job id: 6668989338
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | task id: 44871837
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | errors: (none)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:12:07] 2025-06-05 16:11:46,879 | INFO     | pilot state: finished 
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | transexitcode: 0
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | exeerrorcode: 0
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | exeerrordiag: 
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | exitcode: 0
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | exitmsg: OK
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | cpuconsumptiontime: 56444 s
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | nevents: 400
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | neventsw: 0
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | pid: 3734533
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | pgrp: 3734533
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | corecount: 8
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | event service: False
[2025-06-05 12:12:07] 2025-06-05 16:11:46,880 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 13: 2397710, 24: 2397710, 10038: 2426318, 10039: 2435259, 10040: 2435315, 10046: 2435485}
[2025-06-05 12:12:07] 2025-06-05 16:11:46,881 | INFO     | --------------------------------------------------
[2025-06-05 12:12:07] 2025-06-05 16:11:46,881 | INFO     | 
[2025-06-05 12:12:07] 2025-06-05 16:11:46,881 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 12:12:07] 2025-06-05 16:11:46,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | job 6668989338 has completed (purged errors)
[2025-06-05 12:12:07] 2025-06-05 16:11:46,903 | INFO     | overall cleanup function is called
[2025-06-05 12:12:07] 2025-06-05 16:11:47,912 | INFO     | --- collectZombieJob: --- 10, [3734533]
[2025-06-05 12:12:07] 2025-06-05 16:11:47,912 | INFO     | zombie collector waiting for pid 3734533
[2025-06-05 12:12:07] 2025-06-05 16:11:47,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:12:07] 2025-06-05 16:11:47,912 | INFO     | collected zombie processes
[2025-06-05 12:12:07] 2025-06-05 16:11:47,912 | INFO     | will attempt to kill all subprocesses of pid=3734533
[2025-06-05 12:12:07] 2025-06-05 16:11:48,281 | INFO     | process IDs to be killed: [3734533] (in reverse order)
[2025-06-05 12:12:07] 2025-06-05 16:11:48,384 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:12:07] 2025-06-05 16:11:48,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:12:07] 2025-06-05 16:11:48,399 | INFO     | did not find any defunct processes belonging to 3734533
[2025-06-05 12:12:07] 2025-06-05 16:11:48,413 | INFO     | did not find any defunct processes belonging to 3734533
[2025-06-05 12:12:07] 2025-06-05 16:11:48,414 | INFO     | ready for new job
[2025-06-05 12:12:07] 2025-06-05 16:11:48,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:12:07] 2025-06-05 16:11:48,415 | INFO     | **************************************
[2025-06-05 12:12:07] 2025-06-05 16:11:48,416 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:12:07] 2025-06-05 16:11:48,416 | INFO     | **************************************
[2025-06-05 12:12:07] 2025-06-05 16:11:48,416 | INFO     | 
[2025-06-05 12:12:07] 2025-06-05 16:11:48,433 | INFO     | architecture information:
[2025-06-05 12:12:07] 2025-06-05 16:11:48,434 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:12:07] 2025-06-05 16:11:48,450 | INFO     | cat /etc/os-release:
[2025-06-05 12:12:07] NAME="CentOS Linux"
[2025-06-05 12:12:07] VERSION="7 (Core)"
[2025-06-05 12:12:07] ID="centos"
[2025-06-05 12:12:07] ID_LIKE="rhel fedora"
[2025-06-05 12:12:07] VERSION_ID="7"
[2025-06-05 12:12:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:12:07] ANSI_COLOR="0;31"
[2025-06-05 12:12:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:12:07] HOME_URL="https://www.centos.org/"
[2025-06-05 12:12:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:12:07] 
[2025-06-05 12:12:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:12:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:12:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:12:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:12:07] 
[2025-06-05 12:12:07] 2025-06-05 16:11:48,450 | INFO     | **************************************
[2025-06-05 12:12:07] 2025-06-05 16:11:48,953 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 12:12:07] 2025-06-05 16:11:48,972 | INFO     | sufficient remaining disk space (76103548928 B)
[2025-06-05 12:12:07] 2025-06-05 16:11:48,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:12:07] 2025-06-05 16:11:48,973 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:12:07] 2025-06-05 16:11:48,973 | INFO     | update_server=False
[2025-06-05 12:12:07] 2025-06-05 16:11:48,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:12:07] 2025-06-05 16:11:48,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:12:07] 2025-06-05 16:11:49,185 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 12:12:07] 2025-06-05 16:11:49,185 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 12:12:07] 2025-06-05 16:11:49,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:12:07] 2025-06-05 16:11:49,185 | INFO     | will abort loop
[2025-06-05 12:12:07] 2025-06-05 16:11:49,601 | INFO     | all payload control threads have been joined
[2025-06-05 12:12:07] 2025-06-05 16:11:49,617 | INFO     | all job control threads have been joined
[2025-06-05 12:12:07] 2025-06-05 16:11:49,622 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:12:07] 2025-06-05 16:11:49,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:12:07] 2025-06-05 16:11:49,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:12:07] 2025-06-05 16:11:49,979 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:49,981 | INFO     | all data control threads have been joined
[2025-06-05 12:12:07] 2025-06-05 16:11:50,074 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,191 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,475 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,606 | INFO     | [payload] control thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,618 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,623 | INFO     | [job] control thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,687 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,841 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,980 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,986 | INFO     | [data] control thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:50,990 | INFO     | [job] validate thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:51,424 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:51,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:12:07] 2025-06-05 16:11:51,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:12:07] 2025-06-05 16:11:52,896 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:55,571 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:11:59,767 | INFO     | job.realtimelogging is not enabled
[2025-06-05 12:12:07] 2025-06-05 16:12:00,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:12:07] 2025-06-05 16:12:02,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643366012736)>', '<ExcThread(monitor, started 139642707883776)>']
[2025-06-05 12:12:07] 2025-06-05 16:12:02,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:12:07] 2025-06-05 16:12:02,689 | INFO     | [monitor] control thread has ended
[2025-06-05 12:12:07] 2025-06-05 16:12:07,284 | INFO     | all workflow threads have been joined
[2025-06-05 12:12:07] 2025-06-05 16:12:07,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:12:07] 2025-06-05 16:12:07,284 | INFO     | traces error code: 0
[2025-06-05 12:12:07] 2025-06-05 16:12:07,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:12:07] 2025-06-05 16:12:07,518 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:12:07] 2025-06-05 16:12:07,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:12:07] 2025-06-05 16:12:07,526 [wrapper] pilotpid: 3727193
[2025-06-05 12:12:07] 2025-06-05 16:12:07,528 [wrapper] Pilot exit status: 0
[2025-06-05 12:12:07] 2025-06-05 16:12:07,539 [wrapper] pandaids: 6668989338
[2025-06-05 12:12:07] 2025-06-05 16:12:07,611 [wrapper] cleanup supervisor_pilot 4102782 3727194
[2025-06-05 12:12:07] 2025-06-05 16:12:07,615 [wrapper] Test setup, not cleaning
[2025-06-05 12:12:07] 2025-06-05 16:12:07,618 [wrapper] apfmon messages muted
[2025-06-05 12:12:07] 2025-06-05 16:12:07,621 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:12:07] 2025-06-05 16:12:07,624 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:12:07]  *** Error codes and diagnostics ***
[2025-06-05 12:12:07]     "exeErrorCode": 0,
[2025-06-05 12:12:07]     "exeErrorDiag": "",
[2025-06-05 12:12:07]     "pilotErrorCode": 0,
[2025-06-05 12:12:07]     "pilotErrorDiag": "",
[2025-06-05 12:12:07]  *** Listing of results directory ***
[2025-06-05 12:12:07] total 420604
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas    495897 May 28 18:52 pilot3.tar.gz
[2025-06-05 12:12:07] -rwx------. 1 boincer umatlas     37140 May 28 19:10 runpilot2-wrapper.sh
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas      5111 May 28 19:10 queuedata.json
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas       100 Jun  5 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:12:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 09:23 run_atlas
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas       105 Jun  5 09:23 job.xml
[2025-06-05 12:12:07] -rw-r--r--. 2 boincer umatlas 222595522 Jun  5 09:23 EVNT.44871834._003565.pool.root.1
[2025-06-05 12:12:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 09:23 start_atlas.sh
[2025-06-05 12:12:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 09:23 shared
[2025-06-05 12:12:07] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 09:23 input.tar.gz
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas         0 Jun  5 09:23 boinc_lockfile
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 09:23 pandaJob.out
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas    983210 Jun  5 09:23 agis_schedconf.cvmfs.json
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas   1598969 Jun  5 09:23 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:12:07] drwx------. 4 boincer umatlas      4096 Jun  5 09:23 pilot3
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas      6853 Jun  5 12:10 init_data.xml
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas        95 Jun  5 12:11 pilot_heartbeat.json
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas 201766650 Jun  5 12:11 HITS.44871837._091678.pool.root.1
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas       530 Jun  5 12:11 boinc_task_state.xml
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas      1040 Jun  5 12:11 memory_monitor_summary.json
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas    357658 Jun  5 12:11 log.44871837._091678.job.log.tgz.1
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas      7727 Jun  5 12:11 heartbeat.json
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 12:12 boinc_mmap_file
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas        28 Jun  5 12:12 wrapper_checkpoint.txt
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas      4611 Jun  5 12:12 pilotlog.txt
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas    895574 Jun  5 12:12 log.44871837._091678.job.log.1
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas       357 Jun  5 12:12 output.list
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas       620 Jun  5 12:12 runtime_log
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas   1269760 Jun  5 12:12 result.tar.gz
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas      8665 Jun  5 12:12 runtime_log.err
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas       656 Jun  5 12:12 LTKKDmI6ee7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQHUKDm7OS45m.diag
[2025-06-05 12:12:07] -rw-r--r--. 1 boincer umatlas     21079 Jun  5 12:12 stderr.txt
[2025-06-05 12:12:07] HITS file was successfully produced:
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas 201766650 Jun  5 12:11 shared/HITS.pool.root.1
[2025-06-05 12:12:07]  *** Contents of shared directory: ***
[2025-06-05 12:12:07] total 416184
[2025-06-05 12:12:07] -rw-r--r--. 2 boincer umatlas 222595522 Jun  5 09:23 ATLAS.root_0
[2025-06-05 12:12:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 09:23 start_atlas.sh
[2025-06-05 12:12:07] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 09:23 input.tar.gz
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas 201766650 Jun  5 12:11 HITS.pool.root.1
[2025-06-05 12:12:07] -rw-------. 1 boincer umatlas   1269760 Jun  5 12:12 result.tar.gz
12:12:09 (3723459): run_atlas exited; CPU time 56791.088100
12:12:09 (3723459): called boinc_finish(0)

</stderr_txt>
]]>

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