Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:22:10 (385297): wrapper (7.7.26015): starting
09:22:10 (385297): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 09:22:10] Arguments: --nthreads 8
[2025-06-05 09:22:10] Threads: 8
[2025-06-05 09:22:10] Checking for CVMFS
[2025-06-05 09:22:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:22:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:22:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:22:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:22:10] 2.12.6.0 311205 24786 555500 146820 3 205 40226252 40960000 11519 16776704 1 131698276 99.733 90243992 24917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 09:22:10] CVMFS is ok
[2025-06-05 09:22:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 09:22:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 09:22:10] Further information can be found at the LHC@home message board.
[2025-06-05 09:22:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:22:10] Checking for apptainer binary...
[2025-06-05 09:22:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:22:10] Running /usr/bin/apptainer --version
[2025-06-05 09:22:10] apptainer version 1.4.1-1.el9
[2025-06-05 09:22:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:22:10] c7-10-13.aglt2.org
[2025-06-05 09:22:10] apptainer works
[2025-06-05 09:22:11] Set ATHENA_PROC_NUMBER=8
[2025-06-05 09:22:11] Set ATHENA_CORE_NUMBER=8
[2025-06-05 09:22:11] Starting ATLAS job with PandaID=6668229872
[2025-06-05 09:22:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:02:11]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:02:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 11:02:11]  is_altstaged=None
[2025-06-05 11:02:11]  is_tar=False
[2025-06-05 11:02:11]  lfn=log.44871837._080630.job.log.tgz.1
[2025-06-05 11:02:11]  mtime=0
[2025-06-05 11:02:11]  protocol_id=None
[2025-06-05 11:02:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 11:02:11]  replicas=None
[2025-06-05 11:02:11]  scope=mc23_13p6TeV
[2025-06-05 11:02:11]  status=None
[2025-06-05 11:02:11]  status_code=0
[2025-06-05 11:02:11]  storage_token=
[2025-06-05 11:02:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668229872/log.44871837._080630.job.log.tgz.1
[2025-06-05 11:02:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/1c/log.44871837._080630.job.log.tgz.1
[2025-06-05 11:02:11]  workdir=None
[2025-06-05 11:02:11] ]
[2025-06-05 11:02:11] 2025-06-05 15:01:47,485 | INFO     | transferring file log.44871837._080630.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668229872/log.44871837._080630.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 11:02:11] 2025-06-05 15:01:47,485 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668229872/log.44871837._080630.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._080630.job
[2025-06-05 11:02:11] 2025-06-05 15:01:47,499 | INFO     | adding to output.list: log.44871837._080630.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/1c/log.44871837._080630.job.log.tg
[2025-06-05 11:02:11] 2025-06-05 15:01:47,500 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 11:02:11] 2025-06-05 15:01:47,500 | INFO     | summary of transferred files:
[2025-06-05 11:02:11] 2025-06-05 15:01:47,500 | INFO     |  -- lfn=log.44871837._080630.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 11:02:11] 2025-06-05 15:01:47,500 | INFO     | stage-out finished correctly
[2025-06-05 11:02:11] 2025-06-05 15:01:48,277 | INFO     | monitor loop #440: job 0:6668229872 is in state 'finished'
[2025-06-05 11:02:11] 2025-06-05 15:01:48,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:02:11] 2025-06-05 15:01:50,781 | INFO     | monitor loop #441: job 0:6668229872 is in state 'finished'
[2025-06-05 11:02:11] 2025-06-05 15:01:50,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:02:11] 2025-06-05 15:01:50,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 11:02:11] 2025-06-05 15:01:52,911 | INFO     | job 6668229872 has state=finished
[2025-06-05 11:02:11] 2025-06-05 15:01:52,911 | INFO     | preparing for final server update for job 6668229872 in state='finished'
[2025-06-05 11:02:11] 2025-06-05 15:01:52,912 | INFO     | this job has now completed (state=finished)
[2025-06-05 11:02:11] 2025-06-05 15:01:52,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 11:02:11] 2025-06-05 15:01:52,912 | INFO     | log transfer has been attempted: DONE
[2025-06-05 11:02:11] 2025-06-05 15:01:52,912 | INFO     | job 6668229872 has finished - writing final server update
[2025-06-05 11:02:11] 2025-06-05 15:01:52,912 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:02:11] 2025-06-05 15:01:52,930 | INFO     | executing command: lscpu
[2025-06-05 11:02:11] 2025-06-05 15:01:53,011 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:02:11] 2025-06-05 15:01:53,284 | INFO     | monitor loop #442: job 0:6668229872 is in state 'finished'
[2025-06-05 11:02:11] 2025-06-05 15:01:53,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:02:11] 2025-06-05 15:01:55,788 | INFO     | monitor loop #443: job 0:6668229872 is in state 'finished'
[2025-06-05 11:02:11] 2025-06-05 15:01:55,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:02:11] 2025-06-05 15:01:56,964 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:02:11] 2025-06-05 15:01:56,964 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668229872/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:02:11] 2025-06-05 15:01:56,964 | INFO     | extracted standard info from prmon json
[2025-06-05 11:02:11] 2025-06-05 15:01:56,965 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:02:11] 2025-06-05 15:01:56,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:02:11] 2025-06-05 15:01:56,965 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:02:11] 2025-06-05 15:01:56,965 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:02:11] 2025-06-05 15:01:56,967 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:02:11] 2025-06-05 15:01:56,967 | INFO     | sum of square deviations: 233641590.0
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | sum of deviations: -26465822766.999992
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | mean x: 1749132819.0
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | mean y: 2382843.945054945
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | -- intersect: 198135939389.2377
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | intersect: 198135939389.2377
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | chi2: 0.21747668842805473
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | -- intersect: 198135939389.2377
[2025-06-05 11:02:11] 2025-06-05 15:01:56,968 | INFO     | current memory leak: -113.28 B/s (using 91 data points, chi2=0.22)
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | ..............................
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . Timing measurements:
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . get job = 0 s
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . initial setup = 2 s
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . payload setup = 7 s
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . stage-in = 0 s
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . payload execution = 5938 s
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . stage-out = 0 s
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | . log creation = 0 s
[2025-06-05 11:02:11] 2025-06-05 15:01:56,969 | INFO     | ..............................
[2025-06-05 11:02:11] 2025-06-05 15:01:57,047 | INFO     | 
[2025-06-05 11:02:11] 2025-06-05 15:01:57,047 | INFO     | job summary report
[2025-06-05 11:02:11] 2025-06-05 15:01:57,047 | INFO     | --------------------------------------------------
[2025-06-05 11:02:11] 2025-06-05 15:01:57,047 | INFO     | PanDA job id: 6668229872
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | task id: 44871837
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | errors: (none)
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | pilot state: finished 
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | transexitcode: 0
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | exeerrorcode: 0
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | exeerrordiag: 
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | exitcode: 0
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | exitmsg: OK
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | cpuconsumptiontime: 41978 s
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | nevents: 400
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | neventsw: 0
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | pid: 406378
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | pgrp: 406378
[2025-06-05 11:02:11] 2025-06-05 15:01:57,048 | INFO     | corecount: 8
[2025-06-05 11:02:11] 2025-06-05 15:01:57,049 | INFO     | event service: False
[2025-06-05 11:02:11] 2025-06-05 15:01:57,049 | INFO     | sizes: {0: 2397390, 5: 2397596, 11: 2397652, 5949: 2424349, 5950: 2424348, 5951: 2433345, 5954: 2433529, 5960: 2433699}
[2025-06-05 11:02:11] 2025-06-05 15:01:57,049 | INFO     | --------------------------------------------------
[2025-06-05 11:02:11] 2025-06-05 15:01:57,049 | INFO     | 
[2025-06-05 11:02:11] 2025-06-05 15:01:57,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 11:02:11] 2025-06-05 15:01:57,072 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:02:11] 2025-06-05 15:01:57,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:02:11] 2025-06-05 15:01:57,074 | INFO     | job 6668229872 has completed (purged errors)
[2025-06-05 11:02:11] 2025-06-05 15:01:57,074 | INFO     | overall cleanup function is called
[2025-06-05 11:02:11] 2025-06-05 15:01:58,083 | INFO     | --- collectZombieJob: --- 10, [406378]
[2025-06-05 11:02:11] 2025-06-05 15:01:58,083 | INFO     | zombie collector waiting for pid 406378
[2025-06-05 11:02:11] 2025-06-05 15:01:58,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:02:11] 2025-06-05 15:01:58,083 | INFO     | collected zombie processes
[2025-06-05 11:02:11] 2025-06-05 15:01:58,083 | INFO     | will attempt to kill all subprocesses of pid=406378
[2025-06-05 11:02:11] 2025-06-05 15:01:58,376 | INFO     | process IDs to be killed: [406378] (in reverse order)
[2025-06-05 11:02:11] 2025-06-05 15:01:58,497 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:02:11] 2025-06-05 15:01:58,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:02:11] 2025-06-05 15:01:58,512 | INFO     | did not find any defunct processes belonging to 406378
[2025-06-05 11:02:11] 2025-06-05 15:01:58,525 | INFO     | did not find any defunct processes belonging to 406378
[2025-06-05 11:02:11] 2025-06-05 15:01:58,525 | INFO     | ready for new job
[2025-06-05 11:02:11] 2025-06-05 15:01:58,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:02:11] 2025-06-05 15:01:58,528 | INFO     | **************************************
[2025-06-05 11:02:11] 2025-06-05 15:01:58,528 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:02:11] 2025-06-05 15:01:58,528 | INFO     | **************************************
[2025-06-05 11:02:11] 2025-06-05 15:01:58,528 | INFO     | 
[2025-06-05 11:02:11] 2025-06-05 15:01:58,544 | INFO     | architecture information:
[2025-06-05 11:02:11] 2025-06-05 15:01:58,545 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:02:11] 2025-06-05 15:01:58,563 | INFO     | cat /etc/os-release:
[2025-06-05 11:02:11] NAME="CentOS Linux"
[2025-06-05 11:02:11] VERSION="7 (Core)"
[2025-06-05 11:02:11] ID="centos"
[2025-06-05 11:02:11] ID_LIKE="rhel fedora"
[2025-06-05 11:02:11] VERSION_ID="7"
[2025-06-05 11:02:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:02:11] ANSI_COLOR="0;31"
[2025-06-05 11:02:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:02:11] HOME_URL="https://www.centos.org/"
[2025-06-05 11:02:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:02:11] 
[2025-06-05 11:02:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:02:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:02:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:02:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:02:11] 
[2025-06-05 11:02:11] 2025-06-05 15:01:58,563 | INFO     | **************************************
[2025-06-05 11:02:11] 2025-06-05 15:01:59,066 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 11:02:11] 2025-06-05 15:01:59,084 | INFO     | sufficient remaining disk space (86481305600 B)
[2025-06-05 11:02:11] 2025-06-05 15:01:59,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:02:11] 2025-06-05 15:01:59,085 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:02:11] 2025-06-05 15:01:59,085 | INFO     | update_server=False
[2025-06-05 11:02:11] 2025-06-05 15:01:59,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:02:11] 2025-06-05 15:01:59,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:02:11] 2025-06-05 15:01:59,299 | INFO     | aborting loop
[2025-06-05 11:02:11] 2025-06-05 15:01:59,392 | INFO     | all data control threads have been joined
[2025-06-05 11:02:11] 2025-06-05 15:01:59,420 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:02:11] 2025-06-05 15:01:59,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:02:11] 2025-06-05 15:01:59,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:02:11] 2025-06-05 15:01:59,777 | INFO     | all payload control threads have been joined
[2025-06-05 11:02:11] 2025-06-05 15:02:00,090 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:00,295 | INFO     | all job control threads have been joined
[2025-06-05 11:02:11] 2025-06-05 15:02:00,305 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:00,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:00,397 | INFO     | [data] control thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:00,417 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:00,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:02:11] 2025-06-05 15:02:00,672 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:00,781 | INFO     | [payload] control thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:01,102 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:01,156 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:01,241 | INFO     | [job] validate thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:01,301 | INFO     | [job] control thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:01,340 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:01,472 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:01,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:02:11] 2025-06-05 15:02:02,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:02:11] 2025-06-05 15:02:02,582 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:03,064 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:05,521 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:02:11] 2025-06-05 15:02:06,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648237987648)>', '<ExcThread(monitor, started 140647738623744)>']
[2025-06-05 11:02:11] 2025-06-05 15:02:06,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:02:11] 2025-06-05 15:02:06,458 | INFO     | [monitor] control thread has ended
[2025-06-05 11:02:11] 2025-06-05 15:02:11,175 | INFO     | all workflow threads have been joined
[2025-06-05 11:02:11] 2025-06-05 15:02:11,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:02:11] 2025-06-05 15:02:11,175 | INFO     | traces error code: 0
[2025-06-05 11:02:11] 2025-06-05 15:02:11,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:02:11] 2025-06-05 15:02:11,348 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:02:11] 2025-06-05 15:02:11,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:02:11] 2025-06-05 15:02:11,353 [wrapper] pilotpid: 389958
[2025-06-05 11:02:11] 2025-06-05 15:02:11,355 [wrapper] Pilot exit status: 0
[2025-06-05 11:02:11] 2025-06-05 15:02:11,368 [wrapper] pandaids: 6668229872
[2025-06-05 11:02:11] 2025-06-05 15:02:11,446 [wrapper] cleanup supervisor_pilot  907445 389959
[2025-06-05 11:02:11] 2025-06-05 15:02:11,449 [wrapper] Test setup, not cleaning
[2025-06-05 11:02:11] 2025-06-05 15:02:11,451 [wrapper] apfmon messages muted
[2025-06-05 11:02:11] 2025-06-05 15:02:11,453 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:02:11] 2025-06-05 15:02:11,455 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:02:11]  *** Error codes and diagnostics ***
[2025-06-05 11:02:11]     "exeErrorCode": 0,
[2025-06-05 11:02:11]     "exeErrorDiag": "",
[2025-06-05 11:02:11]     "pilotErrorCode": 0,
[2025-06-05 11:02:11]     "pilotErrorDiag": "",
[2025-06-05 11:02:11]  *** Listing of results directory ***
[2025-06-05 11:02:11] total 419608
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas    495897 May 28 03:31 pilot3.tar.gz
[2025-06-05 11:02:11] -rwx------. 1 boincer umatlas     37140 May 28 03:32 runpilot2-wrapper.sh
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas      5111 May 28 03:32 queuedata.json
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas       100 Jun  5 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:02:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 09:22 run_atlas
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas       105 Jun  5 09:22 job.xml
[2025-06-05 11:02:11] -rw-r--r--. 2 boincer umatlas 224706906 Jun  5 09:22 EVNT.44871834._003148.pool.root.1
[2025-06-05 11:02:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 09:22 start_atlas.sh
[2025-06-05 11:02:11] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 09:22 shared
[2025-06-05 11:02:11] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 09:22 input.tar.gz
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas         0 Jun  5 09:22 boinc_lockfile
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 09:22 pandaJob.out
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas    983210 Jun  5 09:22 agis_schedconf.cvmfs.json
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas   1598969 Jun  5 09:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:02:11] drwx------. 4 boincer umatlas      4096 Jun  5 09:22 pilot3
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas      6897 Jun  5 11:00 init_data.xml
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas 199379128 Jun  5 11:01 HITS.44871837._080630.pool.root.1
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas       529 Jun  5 11:01 boinc_task_state.xml
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas        95 Jun  5 11:01 pilot_heartbeat.json
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas      1033 Jun  5 11:01 memory_monitor_summary.json
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas    306792 Jun  5 11:01 log.44871837._080630.job.log.tgz.1
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas      7692 Jun  5 11:01 heartbeat.json
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas        27 Jun  5 11:02 wrapper_checkpoint.txt
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 11:02 boinc_mmap_file
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas      4353 Jun  5 11:02 pilotlog.txt
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas    574737 Jun  5 11:02 log.44871837._080630.job.log.1
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas       357 Jun  5 11:02 output.list
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas       620 Jun  5 11:02 runtime_log
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas    901120 Jun  5 11:02 result.tar.gz
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 11:02 runtime_log.err
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas       654 Jun  5 11:02 6RULDmNSQe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg9SKDmzBhecm.diag
[2025-06-05 11:02:11] -rw-r--r--. 1 boincer umatlas     21388 Jun  5 11:02 stderr.txt
[2025-06-05 11:02:11] HITS file was successfully produced:
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas 199379128 Jun  5 11:01 shared/HITS.pool.root.1
[2025-06-05 11:02:11]  *** Contents of shared directory: ***
[2025-06-05 11:02:11] total 415552
[2025-06-05 11:02:11] -rw-r--r--. 2 boincer umatlas 224706906 Jun  5 09:22 ATLAS.root_0
[2025-06-05 11:02:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 09:22 start_atlas.sh
[2025-06-05 11:02:11] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 09:22 input.tar.gz
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas 199379128 Jun  5 11:01 HITS.pool.root.1
[2025-06-05 11:02:11] -rw-------. 1 boincer umatlas    901120 Jun  5 11:02 result.tar.gz
11:02:13 (385297): run_atlas exited; CPU time 42008.244739
11:02:13 (385297): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN