Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:15:02 (898): wrapper (7.7.26015): starting
15:15:02 (898): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:15:02] Arguments: --nthreads 8
[2025-06-05 15:15:02] Threads: 8
[2025-06-05 15:15:02] Checking for CVMFS
[2025-06-05 15:15:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:15:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:15:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:15:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:15:02] 2.11.2.0 24996 34717 90796 146819 1 159 15073236 25165825 2934 130560 0 18259441 99.763 21129057 2482 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 15:15:02] CVMFS is ok
[2025-06-05 15:15:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:15:02] Checking for apptainer binary...
[2025-06-05 15:15:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:15:02] Running /usr/bin/apptainer --version
[2025-06-05 15:15:02] apptainer version 1.3.2-1.el7
[2025-06-05 15:15:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:15:04] cg-vwn259.simple-grid.lan
[2025-06-05 15:15:04] apptainer works
[2025-06-05 15:15:04] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:15:04] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:15:04] Starting ATLAS job with PandaID=6668229994
[2025-06-05 15:15:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:51:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:51:35] 2025-06-05 18:24:07,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:51:35] 2025-06-05 18:24:07,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:51:35] 2025-06-05 18:24:07,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:51:35] 2025-06-05 18:24:07,116 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:51:35] 2025-06-05 18:24:07,117 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,134 | INFO     | sum of deviations: -46144911682.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,135 | INFO     | mean x: 1749138565.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,135 | INFO     | mean y: 2514011.122923588
[2025-06-05 20:51:35] 2025-06-05 18:24:07,135 | INFO     | -- intersect: 9547491689.137867
[2025-06-05 20:51:35] 2025-06-05 18:24:07,135 | INFO     | intersect: 9547491689.137867
[2025-06-05 20:51:35] 2025-06-05 18:24:07,135 | INFO     | chi2: 2.6651072456551983
[2025-06-05 20:51:35] 2025-06-05 18:24:07,136 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,138 | INFO     | sum of deviations: -25144930139.499992
[2025-06-05 20:51:35] 2025-06-05 18:24:07,139 | INFO     | mean x: 1749138412.5
[2025-06-05 20:51:35] 2025-06-05 18:24:07,139 | INFO     | mean y: 2521639.746621622
[2025-06-05 20:51:35] 2025-06-05 18:24:07,139 | INFO     | -- intersect: 5471749411.139184
[2025-06-05 20:51:35] 2025-06-05 18:24:07,139 | INFO     | intersect: 5471749411.139184
[2025-06-05 20:51:35] 2025-06-05 18:24:07,140 | INFO     | chi2: 1.8984607434031482
[2025-06-05 20:51:35] 2025-06-05 18:24:07,140 | INFO     | current chi2=1.8984607434031482 (change=28.76606573719983 %)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,140 | INFO     | sum of square deviations: 7641036290.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,143 | INFO     | sum of deviations: -24330103332.999992
[2025-06-05 20:51:35] 2025-06-05 18:24:07,143 | INFO     | mean x: 1749138260.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,143 | INFO     | mean y: 2521949.972508591
[2025-06-05 20:51:35] 2025-06-05 18:24:07,143 | INFO     | -- intersect: 5572017106.696049
[2025-06-05 20:51:35] 2025-06-05 18:24:07,143 | INFO     | intersect: 5572017106.696049
[2025-06-05 20:51:35] 2025-06-05 18:24:07,144 | INFO     | chi2: 1.8978996226453086
[2025-06-05 20:51:35] 2025-06-05 18:24:07,144 | INFO     | current chi2=1.8978996226453086 (change=0.029556616316104803 %)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,144 | INFO     | right removable region: 290
[2025-06-05 20:51:35] 2025-06-05 18:24:07,145 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,147 | INFO     | sum of deviations: -97800686949.99995
[2025-06-05 20:51:35] 2025-06-05 18:24:07,147 | INFO     | mean x: 1749138717.5
[2025-06-05 20:51:35] 2025-06-05 18:24:07,148 | INFO     | mean y: 2532894.9256756757
[2025-06-05 20:51:35] 2025-06-05 18:24:07,148 | INFO     | -- intersect: 21274985171.827885
[2025-06-05 20:51:35] 2025-06-05 18:24:07,148 | INFO     | intersect: 21274985171.827885
[2025-06-05 20:51:35] 2025-06-05 18:24:07,148 | INFO     | chi2: 1.0494616742010978
[2025-06-05 20:51:35] 2025-06-05 18:24:07,148 | INFO     | current chi2=1.0494616742010978 (change=60.62215973064548 %)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,149 | INFO     | sum of square deviations: 7641036290.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,151 | INFO     | sum of deviations: -98032169078.99997
[2025-06-05 20:51:35] 2025-06-05 18:24:07,152 | INFO     | mean x: 1749138870.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,152 | INFO     | mean y: 2532963.6597938146
[2025-06-05 20:51:35] 2025-06-05 18:24:07,152 | INFO     | -- intersect: 22443452092.77061
[2025-06-05 20:51:35] 2025-06-05 18:24:07,152 | INFO     | intersect: 22443452092.77061
[2025-06-05 20:51:35] 2025-06-05 18:24:07,153 | INFO     | chi2: 1.0286440588301944
[2025-06-05 20:51:35] 2025-06-05 18:24:07,153 | INFO     | current chi2=1.0286440588301944 (change=1.9836470337757528 %)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,153 | INFO     | left removable region: 20
[2025-06-05 20:51:35] 2025-06-05 18:24:07,153 | INFO     | sum of square deviations: 6103286527.5
[2025-06-05 20:51:35] 2025-06-05 18:24:07,155 | INFO     | sum of deviations: -58558916579.0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,171 | INFO     | mean x: 1749138839.5
[2025-06-05 20:51:35] 2025-06-05 18:24:07,171 | INFO     | mean y: 2534875.725925926
[2025-06-05 20:51:35] 2025-06-05 18:24:07,171 | INFO     | -- intersect: 16784915143.4479
[2025-06-05 20:51:35] 2025-06-05 18:24:07,172 | INFO     | intersect: 16784915143.4479
[2025-06-05 20:51:35] 2025-06-05 18:24:07,172 | INFO     | chi2: 0.22320081027973337
[2025-06-05 20:51:35] 2025-06-05 18:24:07,172 | INFO     | -- intersect: 16784915143.4479
[2025-06-05 20:51:35] 2025-06-05 18:24:07,172 | INFO     | current memory leak: -9.59 B/s (using 270 data points, chi2=0.22)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,173 | INFO     | ..............................
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . Timing measurements:
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . get job = 0 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . initial setup = 2 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . payload setup = 19 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . stage-in = 0 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . payload execution = 18375 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . stage-out = 4 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | . log creation = 1 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,174 | INFO     | ..............................
[2025-06-05 20:51:35] 2025-06-05 18:24:07,323 | INFO     | 
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | job summary report
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | --------------------------------------------------
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | PanDA job id: 6668229994
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | task id: 44871837
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | errors: (none)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | pilot state: finished 
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | transexitcode: 0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | exeerrorcode: 0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | exeerrordiag: 
[2025-06-05 20:51:35] 2025-06-05 18:24:07,324 | INFO     | exitcode: 0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | exitmsg: OK
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | cpuconsumptiontime: 70660 s
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | nevents: 400
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | neventsw: 0
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | pid: 13592
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | pgrp: 13592
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | corecount: 8
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | event service: False
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | sizes: {0: 2397222, 1: 2397421, 12: 2397655, 18398: 2429195, 18404: 2438138, 18405: 2438194, 18499: 2438492}
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | --------------------------------------------------
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | 
[2025-06-05 20:51:35] 2025-06-05 18:24:07,325 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-06-05 20:51:35] 2025-06-05 18:24:07,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:51:35] 2025-06-05 18:24:07,755 | INFO     | job 6668229994 has completed (purged errors)
[2025-06-05 20:51:35] 2025-06-05 18:24:07,755 | INFO     | overall cleanup function is called
[2025-06-05 20:51:35] 2025-06-05 18:24:08,764 | INFO     | --- collectZombieJob: --- 10, [13592]
[2025-06-05 20:51:35] 2025-06-05 18:24:08,765 | INFO     | zombie collector waiting for pid 13592
[2025-06-05 20:51:35] 2025-06-05 18:24:08,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:51:35] 2025-06-05 18:24:08,765 | INFO     | collected zombie processes
[2025-06-05 20:51:35] 2025-06-05 18:24:08,765 | INFO     | will attempt to kill all subprocesses of pid=13592
[2025-06-05 20:51:35] 2025-06-05 18:24:08,925 | INFO     | process IDs to be killed: [13592] (in reverse order)
[2025-06-05 20:51:35] 2025-06-05 18:24:09,490 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:51:35] 2025-06-05 18:24:09,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:51:35] 2025-06-05 18:24:09,494 | INFO     | did not find any defunct processes belonging to 13592
[2025-06-05 20:51:35] 2025-06-05 18:24:09,498 | INFO     | did not find any defunct processes belonging to 13592
[2025-06-05 20:51:35] 2025-06-05 18:24:09,499 | INFO     | ready for new job
[2025-06-05 20:51:35] 2025-06-05 18:24:09,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:51:35] 2025-06-05 18:24:09,501 | INFO     | **************************************
[2025-06-05 20:51:35] 2025-06-05 18:24:09,502 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:51:35] 2025-06-05 18:24:09,502 | INFO     | **************************************
[2025-06-05 20:51:35] 2025-06-05 18:24:09,502 | INFO     | 
[2025-06-05 20:51:35] 2025-06-05 18:24:09,502 | INFO     | pilot is running in a VM
[2025-06-05 20:51:35] 2025-06-05 18:24:09,503 | INFO     | architecture information:
[2025-06-05 20:51:35] 2025-06-05 18:24:09,517 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:51:35] 2025-06-05 18:24:09,731 | INFO     | cat /etc/os-release:
[2025-06-05 20:51:35] NAME="CentOS Linux"
[2025-06-05 20:51:35] VERSION="7 (Core)"
[2025-06-05 20:51:35] ID="centos"
[2025-06-05 20:51:35] ID_LIKE="rhel fedora"
[2025-06-05 20:51:35] VERSION_ID="7"
[2025-06-05 20:51:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:51:35] ANSI_COLOR="0;31"
[2025-06-05 20:51:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:51:35] HOME_URL="https://www.centos.org/"
[2025-06-05 20:51:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:51:35] 
[2025-06-05 20:51:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:51:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:51:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:51:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:51:35] 
[2025-06-05 20:51:35] 2025-06-05 18:24:09,731 | INFO     | **************************************
[2025-06-05 20:51:35] 2025-06-05 18:24:09,790 | INFO     | PID=4559 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 20:51:35] 2025-06-05 18:24:09,791 | INFO     | .. there are 9 such processes running
[2025-06-05 20:51:35] 2025-06-05 18:24:10,235 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-06-05 20:51:35] 2025-06-05 18:24:10,457 | INFO     | sufficient remaining disk space (497103667200 B)
[2025-06-05 20:51:35] 2025-06-05 18:24:10,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:51:35] 2025-06-05 18:24:10,457 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:51:35] 2025-06-05 18:24:10,457 | INFO     | update_server=False
[2025-06-05 20:51:35] 2025-06-05 18:24:10,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:51:35] 2025-06-05 18:24:10,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:51:35] 2025-06-05 18:24:10,459 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 20:51:35] 2025-06-05 18:24:10,460 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:51:35] 2025-06-05 18:24:10,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:51:35] 2025-06-05 18:24:10,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:51:35] 2025-06-05 18:24:10,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:51:35] 2025-06-05 18:24:10,663 | INFO     | all data control threads have been joined
[2025-06-05 20:51:35] 2025-06-05 18:24:10,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:51:35] 2025-06-05 18:24:10,987 | INFO     | aborting loop
[2025-06-05 20:51:35] 2025-06-05 18:24:11,136 | INFO     | all job control threads have been joined
[2025-06-05 20:51:35] 2025-06-05 18:24:11,464 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:11,625 | INFO     | [job] validate thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:11,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:11,669 | INFO     | [data] control thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:11,746 | INFO     | all payload control threads have been joined
[2025-06-05 20:51:35] 2025-06-05 18:24:11,921 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:11,930 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:11,993 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:12,142 | INFO     | [job] control thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:12,235 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:12,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:51:35] 2025-06-05 18:24:12,469 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:12,525 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:12,613 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:12,752 | INFO     | [payload] control thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:12,802 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:13,343 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:14,468 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:51:35] 2025-06-05 18:24:15,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140376171145024)>', '<ExcThread(monitor, started 140375863830272)>']
[2025-06-05 20:51:35] 2025-06-05 18:24:16,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:51:35] 2025-06-05 18:24:16,496 | INFO     | [monitor] control thread has ended
[2025-06-05 20:51:35] 2025-06-05 18:24:20,525 | INFO     | all workflow threads have been joined
[2025-06-05 20:51:35] 2025-06-05 18:24:20,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:51:35] 2025-06-05 18:24:20,525 | INFO     | traces error code: 0
[2025-06-05 20:51:35] 2025-06-05 18:24:20,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:51:35] 2025-06-05 18:24:20,846 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:51:35] 2025-06-05 18:24:20,897 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:51:35] 2025-06-05 18:24:20,945 [wrapper] pilotpid: 4559
[2025-06-05 20:51:35] 2025-06-05 18:24:21,001 [wrapper] Pilot exit status: 0
[2025-06-05 20:51:35] 2025-06-05 18:24:21,451 [wrapper] pandaids: 6668229994
[2025-06-05 20:51:35] 2025-06-05 18:24:22,185 [wrapper] cleanup supervisor_pilot 19511 4560
[2025-06-05 20:51:35] 2025-06-05 18:24:22,228 [wrapper] Test setup, not cleaning
[2025-06-05 20:51:35] 2025-06-05 18:24:22,304 [wrapper] apfmon messages muted
[2025-06-05 20:51:35] 2025-06-05 18:24:22,372 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:51:35] 2025-06-05 18:24:22,462 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:51:35]  *** Error codes and diagnostics ***
[2025-06-05 20:51:35]     "exeErrorCode": 0,
[2025-06-05 20:51:35]     "exeErrorDiag": "",
[2025-06-05 20:51:35]     "pilotErrorCode": 0,
[2025-06-05 20:51:35]     "pilotErrorDiag": "",
[2025-06-05 20:51:35]  *** Listing of results directory ***
[2025-06-05 20:51:35] total 412952
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc    495897 May 28 09:31 pilot3.tar.gz
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc      5111 May 28 09:34 queuedata.json
[2025-06-05 20:51:35] -rwx------. 1 boinc boinc     37140 May 28 09:36 runpilot2-wrapper.sh
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc       100 Jun  5 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:51:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 15:15 run_atlas
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc       105 Jun  5 15:15 job.xml
[2025-06-05 20:51:35] -rw-r--r--. 2 boinc boinc 226706974 Jun  5 15:15 EVNT.44871834._003152.pool.root.1
[2025-06-05 20:51:35] -rw-r--r--. 2 boinc boinc     15093 Jun  5 15:15 start_atlas.sh
[2025-06-05 20:51:35] drwxrwx--x. 2 boinc boinc        68 Jun  5 15:15 shared
[2025-06-05 20:51:35] -rw-r--r--. 2 boinc boinc    508882 Jun  5 15:15 input.tar.gz
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc      6391 Jun  5 15:15 init_data.xml
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc         0 Jun  5 15:15 boinc_lockfile
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc      2559 Jun  5 15:15 pandaJob.out
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc    983210 Jun  5 15:15 agis_schedconf.cvmfs.json
[2025-06-05 20:51:35] drwx------. 4 boinc boinc      4096 Jun  5 15:15 pilot3
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc 188299126 Jun  5 20:21 HITS.44871837._080752.pool.root.1
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc       531 Jun  5 20:21 boinc_task_state.xml
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc      1014 Jun  5 20:22 memory_monitor_summary.json
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc   1598969 Jun  5 20:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc    438045 Jun  5 20:22 log.44871837._080752.job.log.tgz.1
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc        95 Jun  5 20:23 pilot_heartbeat.json
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc      7682 Jun  5 20:24 heartbeat.json
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc      4931 Jun  5 20:24 pilotlog.txt
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc   1578827 Jun  5 20:24 log.44871837._080752.job.log.1
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc       357 Jun  5 20:24 output.list
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc       620 Jun  5 20:24 runtime_log
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc   2037760 Jun  5 20:24 result.tar.gz
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc      8673 Jun  5 20:24 runtime_log.err
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc       657 Jun  5 20:24 2zsKDmuVQe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQXbKDmifHzEo.diag
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc      8192 Jun  5 20:51 boinc_mmap_file
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc        28 Jun  5 20:51 wrapper_checkpoint.txt
[2025-06-05 20:51:35] -rw-r--r--. 1 boinc boinc     20564 Jun  5 20:51 stderr.txt
[2025-06-05 20:51:35] HITS file was successfully produced:
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc 188299126 Jun  5 20:21 shared/HITS.pool.root.1
[2025-06-05 20:51:35]  *** Contents of shared directory: ***
[2025-06-05 20:51:35] total 407792
[2025-06-05 20:51:35] -rw-r--r--. 2 boinc boinc 226706974 Jun  5 15:15 ATLAS.root_0
[2025-06-05 20:51:35] -rw-r--r--. 2 boinc boinc     15093 Jun  5 15:15 start_atlas.sh
[2025-06-05 20:51:35] -rw-r--r--. 2 boinc boinc    508882 Jun  5 15:15 input.tar.gz
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc 188299126 Jun  5 20:21 HITS.pool.root.1
[2025-06-05 20:51:35] -rw-------. 1 boinc boinc   2037760 Jun  5 20:24 result.tar.gz
20:51:37 (898): run_atlas exited; CPU time 70909.306040
20:51:37 (898): called boinc_finish(0)

</stderr_txt>
]]>

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