Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:45 (1623292): wrapper (7.7.26015): starting
03:01:45 (1623292): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:01:45] Arguments: --nthreads 4
[2025-06-06 03:01:45] Threads: 4
[2025-06-06 03:01:45] Checking for CVMFS
[2025-06-06 03:01:45] No cvmfs_config command found, will try listing directly
[2025-06-06 03:01:45] CVMFS is ok
[2025-06-06 03:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:01:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:01:45] Further information can be found at the LHC@home message board.
[2025-06-06 03:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:01:45] Checking for apptainer binary...
[2025-06-06 03:01:45] which: no apptainer in ((null))
[2025-06-06 03:01:45] apptainer is not installed, using version from CVMFS
[2025-06-06 03:01:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:01:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-06 03:01:45] apptainer works
[2025-06-06 03:01:45] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:01:45] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:01:45] Starting ATLAS job with PandaID=6667924008
[2025-06-06 03:01:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:31:03]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:31:03] 2025-06-06 05:28:37,180 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 07:31:03] 2025-06-06 05:28:37,818 | INFO     | monitor loop #1173: job 0:6667924008 is in state 'finished'
[2025-06-06 07:31:03] 2025-06-06 05:28:37,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,321 | INFO     | monitor loop #1174: job 0:6667924008 is in state 'finished'
[2025-06-06 07:31:03] 2025-06-06 05:28:40,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,759 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 07:31:03] 2025-06-06 05:28:40,760 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6667924008/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,761 | INFO     | extracted standard info from prmon json
[2025-06-06 07:31:03] 2025-06-06 05:28:40,761 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:31:03] 2025-06-06 05:28:40,761 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:31:03] 2025-06-06 05:28:40,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:31:03] 2025-06-06 05:28:40,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:31:03] 2025-06-06 05:28:40,767 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:31:03] 2025-06-06 05:28:40,768 | INFO     | sum of square deviations: 5576683165.5
[2025-06-06 07:31:03] 2025-06-06 05:28:40,770 | INFO     | sum of deviations: 47387152495.50001
[2025-06-06 07:31:03] 2025-06-06 05:28:40,770 | INFO     | mean x: 1749179700.5
[2025-06-06 07:31:03] 2025-06-06 05:28:40,770 | INFO     | mean y: 2327585.6526717558
[2025-06-06 07:31:03] 2025-06-06 05:28:40,770 | INFO     | -- intersect: -14861103373.167957
[2025-06-06 07:31:03] 2025-06-06 05:28:40,771 | INFO     | intersect: -14861103373.167957
[2025-06-06 07:31:03] 2025-06-06 05:28:40,771 | INFO     | chi2: 1.6283856019462741
[2025-06-06 07:31:03] 2025-06-06 05:28:40,772 | INFO     | sum of square deviations: 5263458688.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,774 | INFO     | sum of deviations: 46172294277.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,774 | INFO     | mean x: 1749179548.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,774 | INFO     | mean y: 2326994.101167315
[2025-06-06 07:31:03] 2025-06-06 05:28:40,774 | INFO     | -- intersect: -15341886311.438099
[2025-06-06 07:31:03] 2025-06-06 05:28:40,774 | INFO     | intersect: -15341886311.438099
[2025-06-06 07:31:03] 2025-06-06 05:28:40,775 | INFO     | chi2: 1.6290047047017449
[2025-06-06 07:31:03] 2025-06-06 05:28:40,775 | INFO     | current chi2=1.6290047047017449 (change=-0.038019419646720155 %)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,775 | INFO     | right removable region: 256
[2025-06-06 07:31:03] 2025-06-06 05:28:40,776 | INFO     | sum of square deviations: 5263458688.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,778 | INFO     | sum of deviations: 4796363388.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,778 | INFO     | mean x: 1749179853.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,778 | INFO     | mean y: 2348169.8365758755
[2025-06-06 07:31:03] 2025-06-06 05:28:40,778 | INFO     | -- intersect: -1591604153.7722042
[2025-06-06 07:31:03] 2025-06-06 05:28:40,778 | INFO     | intersect: -1591604153.7722042
[2025-06-06 07:31:03] 2025-06-06 05:28:40,779 | INFO     | chi2: 0.028952565389776346
[2025-06-06 07:31:03] 2025-06-06 05:28:40,779 | INFO     | current chi2=0.028952565389776346 (change=98.22200802100119 %)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,780 | INFO     | sum of square deviations: 4962187923.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,782 | INFO     | sum of deviations: 6869299822.500001
[2025-06-06 07:31:03] 2025-06-06 05:28:40,782 | INFO     | mean x: 1749180005.5
[2025-06-06 07:31:03] 2025-06-06 05:28:40,782 | INFO     | mean y: 2347108.162698413
[2025-06-06 07:31:03] 2025-06-06 05:28:40,782 | INFO     | -- intersect: -2419093209.6472287
[2025-06-06 07:31:03] 2025-06-06 05:28:40,782 | INFO     | intersect: -2419093209.6472287
[2025-06-06 07:31:03] 2025-06-06 05:28:40,783 | INFO     | chi2: 0.02184187636628896
[2025-06-06 07:31:03] 2025-06-06 05:28:40,783 | INFO     | current chi2=0.02184187636628896 (change=24.55978918537662 %)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,783 | INFO     | left removable region: 20
[2025-06-06 07:31:03] 2025-06-06 05:28:40,783 | INFO     | sum of square deviations: 4075741535.0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,785 | INFO     | sum of deviations: 8857687695.000002
[2025-06-06 07:31:03] 2025-06-06 05:28:40,786 | INFO     | mean x: 1749180127.5
[2025-06-06 07:31:03] 2025-06-06 05:28:40,786 | INFO     | mean y: 2345511.2118644067
[2025-06-06 07:31:03] 2025-06-06 05:28:40,786 | INFO     | -- intersect: -3799095566.1098566
[2025-06-06 07:31:03] 2025-06-06 05:28:40,786 | INFO     | intersect: -3799095566.1098566
[2025-06-06 07:31:03] 2025-06-06 05:28:40,786 | INFO     | chi2: 0.0011210140393458738
[2025-06-06 07:31:03] 2025-06-06 05:28:40,787 | INFO     | -- intersect: -3799095566.1098566
[2025-06-06 07:31:03] 2025-06-06 05:28:40,787 | INFO     | current memory leak: 2.17 B/s (using 236 data points, chi2=0.00)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | ..............................
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | . Timing measurements:
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | . get job = 0 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | . initial setup = 1 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | . payload setup = 6 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | . stage-in = 0 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | . payload execution = 15972 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,788 | INFO     | . stage-out = 1 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,789 | INFO     | . log creation = 0 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,789 | INFO     | ..............................
[2025-06-06 07:31:03] 2025-06-06 05:28:40,900 | INFO     | 
[2025-06-06 07:31:03] 2025-06-06 05:28:40,901 | INFO     | job summary report
[2025-06-06 07:31:03] 2025-06-06 05:28:40,901 | INFO     | --------------------------------------------------
[2025-06-06 07:31:03] 2025-06-06 05:28:40,901 | INFO     | PanDA job id: 6667924008
[2025-06-06 07:31:03] 2025-06-06 05:28:40,901 | INFO     | task id: 44871837
[2025-06-06 07:31:03] 2025-06-06 05:28:40,901 | INFO     | errors: (none)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,901 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:31:03] 2025-06-06 05:28:40,901 | INFO     | pilot state: finished 
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | transexitcode: 0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | exeerrorcode: 0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | exeerrordiag: 
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | exitcode: 0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | exitmsg: OK
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | cpuconsumptiontime: 61429 s
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | nevents: 400
[2025-06-06 07:31:03] 2025-06-06 05:28:40,902 | INFO     | neventsw: 0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | pid: 1634041
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | pgrp: 1634041
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | corecount: 4
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | event service: False
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | sizes: {0: 2397403, 4: 2397609, 11: 2397637, 15981: 2428729, 15982: 2428728, 15984: 2437747, 15985: 2437931, 15991: 2438101}
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | --------------------------------------------------
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | 
[2025-06-06 07:31:03] 2025-06-06 05:28:40,903 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-06 07:31:03] 2025-06-06 05:28:40,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:31:03] 2025-06-06 05:28:40,923 | INFO     | job 6667924008 has completed (purged errors)
[2025-06-06 07:31:03] 2025-06-06 05:28:40,924 | INFO     | overall cleanup function is called
[2025-06-06 07:31:03] 2025-06-06 05:28:41,932 | INFO     | --- collectZombieJob: --- 10, [1634041]
[2025-06-06 07:31:03] 2025-06-06 05:28:41,932 | INFO     | zombie collector waiting for pid 1634041
[2025-06-06 07:31:03] 2025-06-06 05:28:41,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:31:03] 2025-06-06 05:28:41,932 | INFO     | collected zombie processes
[2025-06-06 07:31:03] 2025-06-06 05:28:41,932 | INFO     | will attempt to kill all subprocesses of pid=1634041
[2025-06-06 07:31:03] 2025-06-06 05:28:42,206 | INFO     | process IDs to be killed: [1634041] (in reverse order)
[2025-06-06 07:31:03] 2025-06-06 05:28:42,279 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:31:03] 2025-06-06 05:28:42,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:31:03] 2025-06-06 05:28:42,287 | INFO     | did not find any defunct processes belonging to 1634041
[2025-06-06 07:31:03] 2025-06-06 05:28:42,295 | INFO     | did not find any defunct processes belonging to 1634041
[2025-06-06 07:31:03] 2025-06-06 05:28:42,295 | INFO     | ready for new job
[2025-06-06 07:31:03] 2025-06-06 05:28:42,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:31:03] 2025-06-06 05:28:42,298 | INFO     | **************************************
[2025-06-06 07:31:03] 2025-06-06 05:28:42,298 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:31:03] 2025-06-06 05:28:42,298 | INFO     | **************************************
[2025-06-06 07:31:03] 2025-06-06 05:28:42,298 | INFO     | 
[2025-06-06 07:31:03] 2025-06-06 05:28:42,301 | INFO     | architecture information:
[2025-06-06 07:31:03] 2025-06-06 05:28:42,301 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:31:03] 2025-06-06 05:28:42,314 | INFO     | cat /etc/os-release:
[2025-06-06 07:31:03] NAME="CentOS Linux"
[2025-06-06 07:31:03] VERSION="7 (Core)"
[2025-06-06 07:31:03] ID="centos"
[2025-06-06 07:31:03] ID_LIKE="rhel fedora"
[2025-06-06 07:31:03] VERSION_ID="7"
[2025-06-06 07:31:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:31:03] ANSI_COLOR="0;31"
[2025-06-06 07:31:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:31:03] HOME_URL="https://www.centos.org/"
[2025-06-06 07:31:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:31:03] 
[2025-06-06 07:31:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:31:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:31:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:31:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:31:03] 
[2025-06-06 07:31:03] 2025-06-06 05:28:42,315 | INFO     | **************************************
[2025-06-06 07:31:03] 2025-06-06 05:28:42,726 | INFO     | PID=1627145 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 07:31:03] 2025-06-06 05:28:42,726 | INFO     | .. there are 3 such processes running
[2025-06-06 07:31:03] 2025-06-06 05:28:42,818 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-06 07:31:03] 2025-06-06 05:28:42,832 | INFO     | sufficient remaining disk space (1643797020672 B)
[2025-06-06 07:31:03] 2025-06-06 05:28:42,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:31:03] 2025-06-06 05:28:42,832 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:31:03] 2025-06-06 05:28:42,832 | INFO     | update_server=False
[2025-06-06 07:31:03] 2025-06-06 05:28:42,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:31:03] 2025-06-06 05:28:42,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:31:03] 2025-06-06 05:28:42,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:31:03] 2025-06-06 05:28:42,833 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 07:31:03] 2025-06-06 05:28:42,834 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:31:03] 2025-06-06 05:28:42,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:31:03] 2025-06-06 05:28:42,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:31:03] 2025-06-06 05:28:43,205 | INFO     | all payload control threads have been joined
[2025-06-06 07:31:03] 2025-06-06 05:28:43,301 | INFO     | all job control threads have been joined
[2025-06-06 07:31:03] 2025-06-06 05:28:43,807 | INFO     | all data control threads have been joined
[2025-06-06 07:31:03] 2025-06-06 05:28:43,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:31:03] 2025-06-06 05:28:43,830 | INFO     | aborting loop
[2025-06-06 07:31:03] 2025-06-06 05:28:43,837 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:43,838 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:43,904 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,064 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,211 | INFO     | [payload] control thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,306 | INFO     | [job] control thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,527 | INFO     | [job] validate thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,595 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,622 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,810 | INFO     | [data] control thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,835 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,838 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,966 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:44,985 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:45,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:31:03] 2025-06-06 05:28:49,162 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:31:03] 2025-06-06 05:28:50,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22965079308096)>', '<ExcThread(monitor, started 22964841973504)>']
[2025-06-06 07:31:03] 2025-06-06 05:28:50,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:31:03] 2025-06-06 05:28:50,869 | INFO     | [monitor] control thread has ended
[2025-06-06 07:31:03] 2025-06-06 05:28:55,735 | INFO     | all workflow threads have been joined
[2025-06-06 07:31:03] 2025-06-06 05:28:55,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:31:03] 2025-06-06 05:28:55,735 | INFO     | traces error code: 0
[2025-06-06 07:31:03] 2025-06-06 05:28:55,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:31:03] 2025-06-06 05:28:55,856 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:31:03] 2025-06-06 05:28:55,859 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:31:03] 2025-06-06 05:28:55,861 [wrapper] pilotpid: 1627145
[2025-06-06 07:31:03] 2025-06-06 05:28:55,863 [wrapper] Pilot exit status: 0
[2025-06-06 07:31:03] 2025-06-06 05:28:55,871 [wrapper] pandaids: 6667924008
[2025-06-06 07:31:03] 2025-06-06 05:28:55,918 [wrapper] cleanup supervisor_pilot 1860331 1627146
[2025-06-06 07:31:03] 2025-06-06 05:28:55,920 [wrapper] Test setup, not cleaning
[2025-06-06 07:31:03] 2025-06-06 05:28:55,922 [wrapper] apfmon messages muted
[2025-06-06 07:31:03] 2025-06-06 05:28:55,924 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:31:03] 2025-06-06 05:28:55,927 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:31:03]  *** Error codes and diagnostics ***
[2025-06-06 07:31:03]     "exeErrorCode": 0,
[2025-06-06 07:31:03]     "exeErrorDiag": "",
[2025-06-06 07:31:03]     "pilotErrorCode": 0,
[2025-06-06 07:31:03]     "pilotErrorDiag": "",
[2025-06-06 07:31:03]  *** Listing of results directory ***
[2025-06-06 07:31:03] total 420604
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc    495897 May 28 05:41 pilot3.tar.gz
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc      5111 May 28 05:50 queuedata.json
[2025-06-06 07:31:03] -rwx------ 1 boinc boinc     37140 May 28 05:54 runpilot2-wrapper.sh
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:31:03] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:01 run_atlas
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:01 job.xml
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc      6419 Jun  6 03:01 init_data.xml
[2025-06-06 07:31:03] -rw-r--r-- 2 boinc boinc 225290637 Jun  6 03:01 EVNT.44871834._003057.pool.root.1
[2025-06-06 07:31:03] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:01 start_atlas.sh
[2025-06-06 07:31:03] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:01 shared
[2025-06-06 07:31:03] -rw-r--r-- 2 boinc boinc    508881 Jun  6 03:01 input.tar.gz
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:01 boinc_lockfile
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc      2559 Jun  6 03:01 pandaJob.out
[2025-06-06 07:31:03] -rw------- 1 boinc boinc    987721 Jun  6 03:01 agis_schedconf.cvmfs.json
[2025-06-06 07:31:03] drwx------ 4 boinc boinc      4096 Jun  6 03:01 pilot3
[2025-06-06 07:31:03] -rw------- 1 boinc boinc 197907200 Jun  6 07:27 HITS.44871837._078194.pool.root.1
[2025-06-06 07:31:03] -rw------- 1 boinc boinc        95 Jun  6 07:28 pilot_heartbeat.json
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc       528 Jun  6 07:28 boinc_task_state.xml
[2025-06-06 07:31:03] -rw------- 1 boinc boinc      1036 Jun  6 07:28 memory_monitor_summary.json
[2025-06-06 07:31:03] -rw------- 1 boinc boinc   1598969 Jun  6 07:28 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:31:03] -rw------- 1 boinc boinc    342996 Jun  6 07:28 log.44871837._078194.job.log.tgz.1
[2025-06-06 07:31:03] -rw------- 1 boinc boinc      7724 Jun  6 07:28 heartbeat.json
[2025-06-06 07:31:03] -rw------- 1 boinc boinc      4882 Jun  6 07:28 pilotlog.txt
[2025-06-06 07:31:03] -rw------- 1 boinc boinc   1488409 Jun  6 07:28 log.44871837._078194.job.log.1
[2025-06-06 07:31:03] -rw------- 1 boinc boinc       357 Jun  6 07:28 output.list
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc       620 Jun  6 07:28 runtime_log
[2025-06-06 07:31:03] -rw------- 1 boinc boinc   1853440 Jun  6 07:28 result.tar.gz
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc      9026 Jun  6 07:28 runtime_log.err
[2025-06-06 07:31:03] -rw------- 1 boinc boinc       665 Jun  6 07:28 6CmMDmN3Me7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEBbKDmNwIVNo.diag
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc      8192 Jun  6 07:31 boinc_mmap_file
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc        27 Jun  6 07:31 wrapper_checkpoint.txt
[2025-06-06 07:31:03] -rw-r--r-- 1 boinc boinc     21090 Jun  6 07:31 stderr.txt
[2025-06-06 07:31:03] HITS file was successfully produced:
[2025-06-06 07:31:03] -rw------- 1 boinc boinc 197907200 Jun  6 07:27 shared/HITS.pool.root.1
[2025-06-06 07:31:03]  *** Contents of shared directory: ***
[2025-06-06 07:31:03] total 415616
[2025-06-06 07:31:03] -rw-r--r-- 2 boinc boinc 225290637 Jun  6 03:01 ATLAS.root_0
[2025-06-06 07:31:03] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:01 start_atlas.sh
[2025-06-06 07:31:03] -rw-r--r-- 2 boinc boinc    508881 Jun  6 03:01 input.tar.gz
[2025-06-06 07:31:03] -rw------- 1 boinc boinc 197907200 Jun  6 07:27 HITS.pool.root.1
[2025-06-06 07:31:03] -rw------- 1 boinc boinc   1853440 Jun  6 07:28 result.tar.gz
07:31:05 (1623292): run_atlas exited; CPU time 62053.965355
07:31:05 (1623292): called boinc_finish(0)

</stderr_txt>
]]>

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