Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:48:25 (162172): wrapper (7.7.26015): starting
11:48:25 (162172): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 11:48:25] Arguments: --nthreads 12
[2025-06-05 11:48:25] Threads: 12
[2025-06-05 11:48:25] Checking for CVMFS
[2025-06-05 11:48:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:48:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:48:26] 2.12.6.0 2658689 24911 506056 146825 1 146 23840016 32935937 12515 16776704 1 98378726 99.584 121382352 34305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 11:48:26] CVMFS is ok
[2025-06-05 11:48:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:48:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:48:26] Further information can be found at the LHC@home message board.
[2025-06-05 11:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:48:26] Checking for apptainer binary...
[2025-06-05 11:48:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:48:26] Running /usr/bin/apptainer --version
[2025-06-05 11:48:26] apptainer version 1.4.1-1.el9
[2025-06-05 11:48:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:48:26] c6-5-7-2.aglt2.org
[2025-06-05 11:48:26] apptainer works
[2025-06-05 11:48:26] Set ATHENA_PROC_NUMBER=12
[2025-06-05 11:48:26] Set ATHENA_CORE_NUMBER=12
[2025-06-05 11:48:26] Starting ATLAS job with PandaID=6668229795
[2025-06-05 11:48:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:49:08]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:49:08] 2025-06-05 17:48:46,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:49:08] 2025-06-05 17:48:49,276 | INFO     | monitor loop #499: job 0:6668229795 is in state 'finished'
[2025-06-05 13:49:08] 2025-06-05 17:48:49,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:49:08] 2025-06-05 17:48:51,788 | INFO     | monitor loop #500: job 0:6668229795 is in state 'finished'
[2025-06-05 13:49:08] 2025-06-05 17:48:51,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:49:08] 2025-06-05 17:48:51,902 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 13:49:08] 2025-06-05 17:48:51,903 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668229795/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:49:08] 2025-06-05 17:48:51,904 | INFO     | extracted standard info from prmon json
[2025-06-05 13:49:08] 2025-06-05 17:48:51,904 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:49:08] 2025-06-05 17:48:51,904 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:49:08] 2025-06-05 17:48:51,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:49:08] 2025-06-05 17:48:51,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:49:08] 2025-06-05 17:48:51,911 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:49:08] 2025-06-05 17:48:51,916 | INFO     | sum of square deviations: 509503213.83898443
[2025-06-05 13:49:08] 2025-06-05 17:48:51,917 | INFO     | sum of deviations: 463498909.98305845
[2025-06-05 13:49:08] 2025-06-05 17:48:51,917 | INFO     | mean x: 1749142111.618644
[2025-06-05 13:49:08] 2025-06-05 17:48:51,917 | INFO     | mean y: 2370950.6440677964
[2025-06-05 13:49:08] 2025-06-05 17:48:51,917 | INFO     | -- intersect: -1588836798.6301415
[2025-06-05 13:49:08] 2025-06-05 17:48:51,917 | INFO     | intersect: -1588836798.6301415
[2025-06-05 13:49:08] 2025-06-05 17:48:51,917 | INFO     | chi2: 2.0633540740191356
[2025-06-05 13:49:08] 2025-06-05 17:48:51,917 | INFO     | sum of square deviations: 447450506.26548725
[2025-06-05 13:49:08] 2025-06-05 17:48:51,923 | INFO     | sum of deviations: 1932104785.2831838
[2025-06-05 13:49:08] 2025-06-05 17:48:51,924 | INFO     | mean x: 1749141959.1238937
[2025-06-05 13:49:08] 2025-06-05 17:48:51,924 | INFO     | mean y: 2374540.2654867256
[2025-06-05 13:49:08] 2025-06-05 17:48:51,924 | INFO     | -- intersect: -7550473209.464611
[2025-06-05 13:49:08] 2025-06-05 17:48:51,924 | INFO     | intersect: -7550473209.464611
[2025-06-05 13:49:08] 2025-06-05 17:48:51,924 | INFO     | chi2: 2.066553640862705
[2025-06-05 13:49:08] 2025-06-05 17:48:51,924 | INFO     | current chi2=2.066553640862705 (change=-0.15506630121591508 %)
[2025-06-05 13:49:08] 2025-06-05 17:48:51,925 | INFO     | right removable region: 112
[2025-06-05 13:49:08] 2025-06-05 17:48:51,925 | INFO     | sum of square deviations: 447441966.26548725
[2025-06-05 13:49:08] 2025-06-05 17:48:51,926 | INFO     | sum of deviations: -19774181312.47788
[2025-06-05 13:49:08] 2025-06-05 17:48:51,926 | INFO     | mean x: 1749142264.1238937
[2025-06-05 13:49:08] 2025-06-05 17:48:51,926 | INFO     | mean y: 2420023.1769911502
[2025-06-05 13:49:08] 2025-06-05 17:48:51,926 | INFO     | -- intersect: 77303743725.079
[2025-06-05 13:49:08] 2025-06-05 17:48:51,928 | INFO     | intersect: 77303743725.079
[2025-06-05 13:49:08] 2025-06-05 17:48:51,928 | INFO     | chi2: 0.300118301425396
[2025-06-05 13:49:08] 2025-06-05 17:48:51,928 | INFO     | current chi2=0.300118301425396 (change=85.45483273063232 %)
[2025-06-05 13:49:08] 2025-06-05 17:48:51,929 | INFO     | sum of square deviations: 390636631.18518513
[2025-06-05 13:49:08] 2025-06-05 17:48:51,929 | INFO     | sum of deviations: -17164203808.333332
[2025-06-05 13:49:08] 2025-06-05 17:48:51,930 | INFO     | mean x: 1749142416.6296296
[2025-06-05 13:49:08] 2025-06-05 17:48:51,930 | INFO     | mean y: 2412777.4166666665
[2025-06-05 13:49:08] 2025-06-05 17:48:51,930 | INFO     | -- intersect: 76858074873.7835
[2025-06-05 13:49:08] 2025-06-05 17:48:51,930 | INFO     | intersect: 76858074873.7835
[2025-06-05 13:49:08] 2025-06-05 17:48:51,930 | INFO     | chi2: 0.2528107993386735
[2025-06-05 13:49:08] 2025-06-05 17:48:51,930 | INFO     | current chi2=0.2528107993386735 (change=15.762951430165367 %)
[2025-06-05 13:49:08] 2025-06-05 17:48:51,930 | INFO     | left removable region: 20
[2025-06-05 13:49:08] 2025-06-05 17:48:51,931 | INFO     | sum of square deviations: 241480650.86956495
[2025-06-05 13:49:08] 2025-06-05 17:48:51,931 | INFO     | sum of deviations: -4593910656.739131
[2025-06-05 13:49:08] 2025-06-05 17:48:51,931 | INFO     | mean x: 1749142538.652174
[2025-06-05 13:49:08] 2025-06-05 17:48:51,933 | INFO     | mean y: 2382675.945652174
[2025-06-05 13:49:08] 2025-06-05 17:48:51,933 | INFO     | -- intersect: 33277945415.795395
[2025-06-05 13:49:08] 2025-06-05 17:48:51,934 | INFO     | intersect: 33277945415.795395
[2025-06-05 13:49:08] 2025-06-05 17:48:51,934 | INFO     | chi2: 0.148123240683747
[2025-06-05 13:49:08] 2025-06-05 17:48:51,934 | INFO     | -- intersect: 33277945415.795395
[2025-06-05 13:49:08] 2025-06-05 17:48:51,934 | INFO     | current memory leak: -19.02 B/s (using 92 data points, chi2=0.15)
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | ..............................
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . Timing measurements:
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . get job = 0 s
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . initial setup = 4 s
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . payload setup = 6 s
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . stage-in = 0 s
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . payload execution = 7176 s
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . stage-out = 1 s
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | . log creation = 0 s
[2025-06-05 13:49:08] 2025-06-05 17:48:51,935 | INFO     | ..............................
[2025-06-05 13:49:08] 2025-06-05 17:48:52,267 | INFO     | 
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | job summary report
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | --------------------------------------------------
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | PanDA job id: 6668229795
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | task id: 44871837
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | errors: (none)
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | pilot state: finished 
[2025-06-05 13:49:08] 2025-06-05 17:48:52,268 | INFO     | transexitcode: 0
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | exeerrorcode: 0
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | exeerrordiag: 
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | exitcode: 0
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | exitmsg: OK
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | cpuconsumptiontime: 48166 s
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | nevents: 400
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | neventsw: 0
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | pid: 173235
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | pgrp: 173235
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | corecount: 12
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | event service: False
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | sizes: {0: 2397386, 4: 2397592, 11: 2397620, 7186: 2424831, 7187: 2433772, 7190: 2433828, 7199: 2434126}
[2025-06-05 13:49:08] 2025-06-05 17:48:52,269 | INFO     | --------------------------------------------------
[2025-06-05 13:49:08] 2025-06-05 17:48:52,270 | INFO     | 
[2025-06-05 13:49:08] 2025-06-05 17:48:52,270 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 13:49:08] 2025-06-05 17:48:52,297 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,297 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,299 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:49:08] 2025-06-05 17:48:52,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:49:08] 2025-06-05 17:48:52,299 | INFO     | job 6668229795 has completed (purged errors)
[2025-06-05 13:49:08] 2025-06-05 17:48:52,299 | INFO     | overall cleanup function is called
[2025-06-05 13:49:08] 2025-06-05 17:48:53,308 | INFO     | --- collectZombieJob: --- 10, [173235]
[2025-06-05 13:49:08] 2025-06-05 17:48:53,309 | INFO     | zombie collector waiting for pid 173235
[2025-06-05 13:49:08] 2025-06-05 17:48:53,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:49:08] 2025-06-05 17:48:53,309 | INFO     | collected zombie processes
[2025-06-05 13:49:08] 2025-06-05 17:48:53,309 | INFO     | will attempt to kill all subprocesses of pid=173235
[2025-06-05 13:49:08] 2025-06-05 17:48:53,695 | INFO     | process IDs to be killed: [173235] (in reverse order)
[2025-06-05 13:49:08] 2025-06-05 17:48:53,801 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:49:08] 2025-06-05 17:48:53,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:49:08] 2025-06-05 17:48:53,828 | INFO     | did not find any defunct processes belonging to 173235
[2025-06-05 13:49:08] 2025-06-05 17:48:53,840 | INFO     | did not find any defunct processes belonging to 173235
[2025-06-05 13:49:08] 2025-06-05 17:48:53,840 | INFO     | ready for new job
[2025-06-05 13:49:08] 2025-06-05 17:48:53,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:49:08] 2025-06-05 17:48:53,843 | INFO     | **************************************
[2025-06-05 13:49:08] 2025-06-05 17:48:53,843 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:49:08] 2025-06-05 17:48:53,843 | INFO     | **************************************
[2025-06-05 13:49:08] 2025-06-05 17:48:53,843 | INFO     | 
[2025-06-05 13:49:08] 2025-06-05 17:48:53,863 | INFO     | architecture information:
[2025-06-05 13:49:08] 2025-06-05 17:48:53,870 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:49:08] 2025-06-05 17:48:53,960 | INFO     | cat /etc/os-release:
[2025-06-05 13:49:08] NAME="CentOS Linux"
[2025-06-05 13:49:08] VERSION="7 (Core)"
[2025-06-05 13:49:08] ID="centos"
[2025-06-05 13:49:08] ID_LIKE="rhel fedora"
[2025-06-05 13:49:08] VERSION_ID="7"
[2025-06-05 13:49:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:49:08] ANSI_COLOR="0;31"
[2025-06-05 13:49:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:49:08] HOME_URL="https://www.centos.org/"
[2025-06-05 13:49:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:49:08] 
[2025-06-05 13:49:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:49:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:49:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:49:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:49:08] 
[2025-06-05 13:49:08] 2025-06-05 17:48:53,961 | INFO     | **************************************
[2025-06-05 13:49:08] 2025-06-05 17:48:54,465 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 13:49:08] 2025-06-05 17:48:54,506 | INFO     | PID=165900 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 13:49:08] 2025-06-05 17:48:54,506 | INFO     | .. there are 14 such processes running
[2025-06-05 13:49:08] 2025-06-05 17:48:54,510 | INFO     | sufficient remaining disk space (76551290880 B)
[2025-06-05 13:49:08] 2025-06-05 17:48:54,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:49:08] 2025-06-05 17:48:54,510 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:49:08] 2025-06-05 17:48:54,510 | INFO     | update_server=False
[2025-06-05 13:49:08] 2025-06-05 17:48:54,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:49:08] 2025-06-05 17:48:54,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:49:08] 2025-06-05 17:48:54,518 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:49:08] 2025-06-05 17:48:54,519 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:49:08] 2025-06-05 17:48:54,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:49:08] 2025-06-05 17:48:54,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:49:08] 2025-06-05 17:48:54,520 | INFO     | all data control threads have been joined
[2025-06-05 13:49:08] 2025-06-05 17:48:55,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:49:08] 2025-06-05 17:48:55,310 | INFO     | aborting loop
[2025-06-05 13:49:08] 2025-06-05 17:48:55,445 | INFO     | all payload control threads have been joined
[2025-06-05 13:49:08] 2025-06-05 17:48:55,514 | INFO     | all job control threads have been joined
[2025-06-05 13:49:08] 2025-06-05 17:48:55,518 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:55,527 | INFO     | [data] control thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:55,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:55,585 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:55,899 | INFO     | [job] validate thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,121 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,316 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,367 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,439 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,451 | INFO     | [payload] control thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,464 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,519 | INFO     | [job] control thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,520 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:56,713 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:48:57,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:49:08] 2025-06-05 17:48:58,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:49:08] 2025-06-05 17:48:58,060 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:49:02,011 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:49:08] 2025-06-05 17:49:02,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951226869568)>', '<ExcThread(monitor, started 139950729176832)>']
[2025-06-05 13:49:08] 2025-06-05 17:49:02,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:49:08] 2025-06-05 17:49:02,565 | INFO     | [monitor] control thread has ended
[2025-06-05 13:49:08] 2025-06-05 17:49:07,350 | INFO     | all workflow threads have been joined
[2025-06-05 13:49:08] 2025-06-05 17:49:07,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:49:08] 2025-06-05 17:49:07,352 | INFO     | traces error code: 0
[2025-06-05 13:49:08] 2025-06-05 17:49:07,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:49:08] 2025-06-05 17:49:07,542 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:49:08] 2025-06-05 17:49:07,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:49:08] 2025-06-05 17:49:07,547 [wrapper] pilotpid: 165900
[2025-06-05 13:49:08] 2025-06-05 17:49:07,549 [wrapper] Pilot exit status: 0
[2025-06-05 13:49:08] 2025-06-05 17:49:07,593 [wrapper] pandaids: 6668229795
[2025-06-05 13:49:08] 2025-06-05 17:49:07,682 [wrapper] cleanup supervisor_pilot  558050 165901
[2025-06-05 13:49:08] 2025-06-05 17:49:07,708 [wrapper] Test setup, not cleaning
[2025-06-05 13:49:08] 2025-06-05 17:49:07,711 [wrapper] apfmon messages muted
[2025-06-05 13:49:08] 2025-06-05 17:49:07,714 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:49:08] 2025-06-05 17:49:07,721 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:49:08]  *** Error codes and diagnostics ***
[2025-06-05 13:49:08]     "exeErrorCode": 0,
[2025-06-05 13:49:08]     "exeErrorDiag": "",
[2025-06-05 13:49:08]     "pilotErrorCode": 0,
[2025-06-05 13:49:08]     "pilotErrorDiag": "",
[2025-06-05 13:49:08]  *** Listing of results directory ***
[2025-06-05 13:49:08] total 409856
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas    495897 May 28 03:05 pilot3.tar.gz
[2025-06-05 13:49:08] -rwx------. 1 boincer umatlas     37140 May 28 03:22 runpilot2-wrapper.sh
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas      5111 May 28 03:22 queuedata.json
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas       100 Jun  5 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:49:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 11:48 run_atlas
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas       105 Jun  5 11:48 job.xml
[2025-06-05 13:49:08] -rw-r--r--. 2 boincer umatlas 226828454 Jun  5 11:48 EVNT.44871834._003145.pool.root.1
[2025-06-05 13:49:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:48 start_atlas.sh
[2025-06-05 13:49:08] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 11:48 shared
[2025-06-05 13:49:08] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 11:48 input.tar.gz
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas         0 Jun  5 11:48 boinc_lockfile
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas      2556 Jun  5 11:48 pandaJob.out
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas    983229 Jun  5 11:48 agis_schedconf.cvmfs.json
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas   1598969 Jun  5 11:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:49:08] drwx------. 4 boincer umatlas      4096 Jun  5 11:48 pilot3
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 13:46 init_data.xml
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas 186965331 Jun  5 13:48 HITS.44871837._080553.pool.root.1
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas        95 Jun  5 13:48 pilot_heartbeat.json
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas       529 Jun  5 13:48 boinc_task_state.xml
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas      1042 Jun  5 13:48 memory_monitor_summary.json
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas    374201 Jun  5 13:48 log.44871837._080553.job.log.tgz.1
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas      7715 Jun  5 13:48 heartbeat.json
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 13:48 boinc_mmap_file
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas        27 Jun  5 13:48 wrapper_checkpoint.txt
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas      4871 Jun  5 13:49 pilotlog.txt
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas    657976 Jun  5 13:49 log.44871837._080553.job.log.1
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas       357 Jun  5 13:49 output.list
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas       620 Jun  5 13:49 runtime_log
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas   1054720 Jun  5 13:49 result.tar.gz
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas      8661 Jun  5 13:49 runtime_log.err
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas       653 Jun  5 13:49 p8DODmhIQe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbWbKDmJ9Upin.diag
[2025-06-05 13:49:08] -rw-r--r--. 1 boincer umatlas     21239 Jun  5 13:49 stderr.txt
[2025-06-05 13:49:08] HITS file was successfully produced:
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas 186965331 Jun  5 13:48 shared/HITS.pool.root.1
[2025-06-05 13:49:08]  *** Contents of shared directory: ***
[2025-06-05 13:49:08] total 405652
[2025-06-05 13:49:08] -rw-r--r--. 2 boincer umatlas 226828454 Jun  5 11:48 ATLAS.root_0
[2025-06-05 13:49:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 11:48 start_atlas.sh
[2025-06-05 13:49:08] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 11:48 input.tar.gz
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas 186965331 Jun  5 13:48 HITS.pool.root.1
[2025-06-05 13:49:08] -rw-------. 1 boincer umatlas   1054720 Jun  5 13:49 result.tar.gz
13:49:10 (162172): run_atlas exited; CPU time 48254.147938
13:49:10 (162172): called boinc_finish(0)

</stderr_txt>
]]>

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