Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:51:25 (23330): wrapper (7.7.26015): starting
14:51:25 (23330): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 14:51:25] Arguments: --nthreads 8
[2025-06-05 14:51:25] Threads: 8
[2025-06-05 14:51:25] Checking for CVMFS
[2025-06-05 14:51:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:51:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:51:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:51:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:51:26] 2.11.2.0 20400 34672 96504 146819 1 159 14223536 25165824 2547 130560 0 17920989 99.850 19199879 2100 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 14:51:26] CVMFS is ok
[2025-06-05 14:51:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:51:26] Checking for apptainer binary...
[2025-06-05 14:51:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:51:26] Running /usr/bin/apptainer --version
[2025-06-05 14:51:26] apptainer version 1.3.2-1.el7
[2025-06-05 14:51:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:51:28] cg-vwn368.simple-grid.lan
[2025-06-05 14:51:28] apptainer works
[2025-06-05 14:51:28] Set ATHENA_PROC_NUMBER=8
[2025-06-05 14:51:28] Set ATHENA_CORE_NUMBER=8
[2025-06-05 14:51:28] Starting ATLAS job with PandaID=6668210725
[2025-06-05 14:51:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 22:12:14]  *** The last 200 lines of the pilot log: ***
[2025-06-05 22:12:14] 2025-06-05 17:56:51,101 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6668210725/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,102 | INFO     | extracted standard info from prmon json
[2025-06-05 22:12:14] 2025-06-05 17:56:51,102 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 22:12:14] 2025-06-05 17:56:51,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 22:12:14] 2025-06-05 17:56:51,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 22:12:14] 2025-06-05 17:56:51,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 22:12:14] 2025-06-05 17:56:51,109 | INFO     | fitting pss+swap vs Time
[2025-06-05 22:12:14] 2025-06-05 17:56:51,110 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,120 | INFO     | sum of deviations: 25171497286.49999
[2025-06-05 22:12:14] 2025-06-05 17:56:51,120 | INFO     | mean x: 1749137058.5
[2025-06-05 22:12:14] 2025-06-05 17:56:51,120 | INFO     | mean y: 2482554.706081081
[2025-06-05 22:12:14] 2025-06-05 17:56:51,120 | INFO     | -- intersect: -5472519550.069122
[2025-06-05 22:12:14] 2025-06-05 17:56:51,120 | INFO     | intersect: -5472519550.069122
[2025-06-05 22:12:14] 2025-06-05 17:56:51,121 | INFO     | chi2: 2.8674191957715225
[2025-06-05 22:12:14] 2025-06-05 17:56:51,121 | INFO     | sum of square deviations: 7641036290.0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,124 | INFO     | sum of deviations: 45446473699.0001
[2025-06-05 22:12:14] 2025-06-05 17:56:51,125 | INFO     | mean x: 1749136906.0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,125 | INFO     | mean y: 2490162.6048109964
[2025-06-05 22:12:14] 2025-06-05 17:56:51,125 | INFO     | -- intersect: -10400824437.341867
[2025-06-05 22:12:14] 2025-06-05 17:56:51,125 | INFO     | intersect: -10400824437.341867
[2025-06-05 22:12:14] 2025-06-05 17:56:51,125 | INFO     | chi2: 1.99787568249109
[2025-06-05 22:12:14] 2025-06-05 17:56:51,125 | INFO     | current chi2=1.99787568249109 (change=30.324952646014104 %)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,126 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 22:12:14] 2025-06-05 17:56:51,128 | INFO     | sum of deviations: 44417084821.5
[2025-06-05 22:12:14] 2025-06-05 17:56:51,148 | INFO     | mean x: 1749136753.5
[2025-06-05 22:12:14] 2025-06-05 17:56:51,148 | INFO     | mean y: 2489756.9755244753
[2025-06-05 22:12:14] 2025-06-05 17:56:51,148 | INFO     | -- intersect: -10707834100.092123
[2025-06-05 22:12:14] 2025-06-05 17:56:51,148 | INFO     | intersect: -10707834100.092123
[2025-06-05 22:12:14] 2025-06-05 17:56:51,149 | INFO     | chi2: 1.998756166857755
[2025-06-05 22:12:14] 2025-06-05 17:56:51,149 | INFO     | current chi2=1.998756166857755 (change=-0.04407102876226723 %)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,149 | INFO     | right removable region: 285
[2025-06-05 22:12:14] 2025-06-05 17:56:51,150 | INFO     | sum of square deviations: 7641036290.0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,152 | INFO     | sum of deviations: -32253306896.000008
[2025-06-05 22:12:14] 2025-06-05 17:56:51,153 | INFO     | mean x: 1749137211.0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,153 | INFO     | mean y: 2504285.2542955326
[2025-06-05 22:12:14] 2025-06-05 17:56:51,153 | INFO     | -- intersect: 7385725242.263585
[2025-06-05 22:12:14] 2025-06-05 17:56:51,153 | INFO     | intersect: 7385725242.263585
[2025-06-05 22:12:14] 2025-06-05 17:56:51,153 | INFO     | chi2: 1.014846673981003
[2025-06-05 22:12:14] 2025-06-05 17:56:51,153 | INFO     | current chi2=1.014846673981003 (change=64.60766268575031 %)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,154 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 22:12:14] 2025-06-05 17:56:51,156 | INFO     | sum of deviations: -32408604905.000008
[2025-06-05 22:12:14] 2025-06-05 17:56:51,157 | INFO     | mean x: 1749137363.5
[2025-06-05 22:12:14] 2025-06-05 17:56:51,157 | INFO     | mean y: 2504323.944055944
[2025-06-05 22:12:14] 2025-06-05 17:56:51,157 | INFO     | -- intersect: 7817217440.178549
[2025-06-05 22:12:14] 2025-06-05 17:56:51,157 | INFO     | intersect: 7817217440.178549
[2025-06-05 22:12:14] 2025-06-05 17:56:51,157 | INFO     | chi2: 0.999233084694123
[2025-06-05 22:12:14] 2025-06-05 17:56:51,158 | INFO     | current chi2=0.999233084694123 (change=1.5385170673744772 %)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,158 | INFO     | left removable region: 20
[2025-06-05 22:12:14] 2025-06-05 17:56:51,158 | INFO     | sum of square deviations: 5770452380.0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,161 | INFO     | sum of deviations: 6284143749.999997
[2025-06-05 22:12:14] 2025-06-05 17:56:51,161 | INFO     | mean x: 1749137333.0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,161 | INFO     | mean y: 2504380.99245283
[2025-06-05 22:12:14] 2025-06-05 17:56:51,161 | INFO     | -- intersect: -1902342884.9100537
[2025-06-05 22:12:14] 2025-06-05 17:56:51,161 | INFO     | intersect: -1902342884.9100537
[2025-06-05 22:12:14] 2025-06-05 17:56:51,162 | INFO     | chi2: 0.03302977928739227
[2025-06-05 22:12:14] 2025-06-05 17:56:51,162 | INFO     | -- intersect: -1902342884.9100537
[2025-06-05 22:12:14] 2025-06-05 17:56:51,162 | INFO     | current memory leak: 1.09 B/s (using 265 data points, chi2=0.03)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,172 | INFO     | ..............................
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . Timing measurements:
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . get job = 0 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . initial setup = 2 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . payload setup = 37 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . stage-in = 0 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . payload execution = 18115 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . stage-out = 3 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | . log creation = 1 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,173 | INFO     | ..............................
[2025-06-05 22:12:14] 2025-06-05 17:56:51,353 | INFO     | 
[2025-06-05 22:12:14] 2025-06-05 17:56:51,353 | INFO     | job summary report
[2025-06-05 22:12:14] 2025-06-05 17:56:51,353 | INFO     | --------------------------------------------------
[2025-06-05 22:12:14] 2025-06-05 17:56:51,353 | INFO     | PanDA job id: 6668210725
[2025-06-05 22:12:14] 2025-06-05 17:56:51,353 | INFO     | task id: 44871837
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | errors: (none)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | pilot state: finished 
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | transexitcode: 0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | exeerrorcode: 0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | exeerrordiag: 
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | exitcode: 0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | exitmsg: OK
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | cpuconsumptiontime: 69141 s
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | nevents: 400
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | neventsw: 0
[2025-06-05 22:12:14] 2025-06-05 17:56:51,354 | INFO     | pid: 11409
[2025-06-05 22:12:14] 2025-06-05 17:56:51,355 | INFO     | pgrp: 11409
[2025-06-05 22:12:14] 2025-06-05 17:56:51,355 | INFO     | corecount: 8
[2025-06-05 22:12:14] 2025-06-05 17:56:51,355 | INFO     | event service: False
[2025-06-05 22:12:14] 2025-06-05 17:56:51,355 | INFO     | sizes: {0: 2397219, 1: 2397418, 12: 2397418, 18: 2397652, 22: 2397680, 18157: 2429318, 18161: 2438315, 18248: 2438429}
[2025-06-05 22:12:14] 2025-06-05 17:56:51,355 | INFO     | --------------------------------------------------
[2025-06-05 22:12:14] 2025-06-05 17:56:51,355 | INFO     | 
[2025-06-05 22:12:14] 2025-06-05 17:56:51,355 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-05 22:12:14] 2025-06-05 17:56:51,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 22:12:14] 2025-06-05 17:56:51,695 | INFO     | job 6668210725 has completed (purged errors)
[2025-06-05 22:12:14] 2025-06-05 17:56:51,695 | INFO     | overall cleanup function is called
[2025-06-05 22:12:14] 2025-06-05 17:56:52,705 | INFO     | --- collectZombieJob: --- 10, [11409]
[2025-06-05 22:12:14] 2025-06-05 17:56:52,705 | INFO     | zombie collector waiting for pid 11409
[2025-06-05 22:12:14] 2025-06-05 17:56:52,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 22:12:14] 2025-06-05 17:56:52,705 | INFO     | collected zombie processes
[2025-06-05 22:12:14] 2025-06-05 17:56:52,706 | INFO     | will attempt to kill all subprocesses of pid=11409
[2025-06-05 22:12:14] 2025-06-05 17:56:52,831 | INFO     | process IDs to be killed: [11409] (in reverse order)
[2025-06-05 22:12:14] 2025-06-05 17:56:53,166 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 22:12:14] 2025-06-05 17:56:53,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 22:12:14] 2025-06-05 17:56:53,183 | INFO     | did not find any defunct processes belonging to 11409
[2025-06-05 22:12:14] 2025-06-05 17:56:53,186 | INFO     | did not find any defunct processes belonging to 11409
[2025-06-05 22:12:14] 2025-06-05 17:56:53,187 | INFO     | ready for new job
[2025-06-05 22:12:14] 2025-06-05 17:56:53,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 22:12:14] 2025-06-05 17:56:53,189 | INFO     | **************************************
[2025-06-05 22:12:14] 2025-06-05 17:56:53,189 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 22:12:14] 2025-06-05 17:56:53,189 | INFO     | **************************************
[2025-06-05 22:12:14] 2025-06-05 17:56:53,190 | INFO     | 
[2025-06-05 22:12:14] 2025-06-05 17:56:53,190 | INFO     | pilot is running in a VM
[2025-06-05 22:12:14] 2025-06-05 17:56:53,190 | INFO     | architecture information:
[2025-06-05 22:12:14] 2025-06-05 17:56:53,199 | INFO     | executing command: cat /etc/os-release
[2025-06-05 22:12:14] 2025-06-05 17:56:53,471 | INFO     | cat /etc/os-release:
[2025-06-05 22:12:14] NAME="CentOS Linux"
[2025-06-05 22:12:14] VERSION="7 (Core)"
[2025-06-05 22:12:14] ID="centos"
[2025-06-05 22:12:14] ID_LIKE="rhel fedora"
[2025-06-05 22:12:14] VERSION_ID="7"
[2025-06-05 22:12:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 22:12:14] ANSI_COLOR="0;31"
[2025-06-05 22:12:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 22:12:14] HOME_URL="https://www.centos.org/"
[2025-06-05 22:12:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 22:12:14] 
[2025-06-05 22:12:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 22:12:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 22:12:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 22:12:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 22:12:14] 
[2025-06-05 22:12:14] 2025-06-05 17:56:53,472 | INFO     | **************************************
[2025-06-05 22:12:14] 2025-06-05 17:56:53,975 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-05 22:12:14] 2025-06-05 17:56:54,284 | INFO     | sufficient remaining disk space (496964206592 B)
[2025-06-05 22:12:14] 2025-06-05 17:56:54,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 22:12:14] 2025-06-05 17:56:54,285 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 22:12:14] 2025-06-05 17:56:54,285 | INFO     | update_server=False
[2025-06-05 22:12:14] 2025-06-05 17:56:54,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 22:12:14] 2025-06-05 17:56:54,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:12:14] 2025-06-05 17:56:54,287 | INFO     | aborting loop
[2025-06-05 22:12:14] 2025-06-05 17:56:54,288 | INFO     | all data control threads have been joined
[2025-06-05 22:12:14] 2025-06-05 17:56:54,979 | INFO     | all job control threads have been joined
[2025-06-05 22:12:14] 2025-06-05 17:56:54,990 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 22:12:14] 2025-06-05 17:56:54,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 22:12:14] 2025-06-05 17:56:54,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 22:12:14] 2025-06-05 17:56:55,291 | INFO     | [job] retrieve thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:55,293 | INFO     | [job] job monitor thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:55,294 | INFO     | [data] control thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:55,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 22:12:14] 2025-06-05 17:56:55,769 | INFO     | all payload control threads have been joined
[2025-06-05 22:12:14] 2025-06-05 17:56:55,963 | INFO     | [job] validate thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:55,985 | INFO     | [job] control thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,093 | INFO     | [payload] failed_post thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,162 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,163 | INFO     | [data] copytool_in thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,349 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:12:14] 2025-06-05 17:56:56,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 22:12:14] 2025-06-05 17:56:56,441 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,505 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,611 | INFO     | [payload] validate_post thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:56,775 | INFO     | [payload] control thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:57,305 | INFO     | [data] copytool_out thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:56:57,368 | INFO     | [job] queue monitor thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:57:00,380 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 22:12:14] 2025-06-05 17:57:00,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634574665536)>', '<ExcThread(monitor, started 139633983731456)>']
[2025-06-05 22:12:14] 2025-06-05 17:57:01,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 22:12:14] 2025-06-05 17:57:01,027 | INFO     | [monitor] control thread has ended
[2025-06-05 22:12:14] 2025-06-05 17:57:05,597 | INFO     | all workflow threads have been joined
[2025-06-05 22:12:14] 2025-06-05 17:57:05,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 22:12:14] 2025-06-05 17:57:05,597 | INFO     | traces error code: 0
[2025-06-05 22:12:14] 2025-06-05 17:57:05,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 22:12:14] 2025-06-05 17:57:05,894 [wrapper] ==== pilot stdout END ====
[2025-06-05 22:12:14] 2025-06-05 17:57:05,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 22:12:14] 2025-06-05 17:57:05,938 [wrapper] pilotpid: 27297
[2025-06-05 22:12:14] 2025-06-05 17:57:05,978 [wrapper] Pilot exit status: 0
[2025-06-05 22:12:14] 2025-06-05 17:57:06,191 [wrapper] pandaids: 6668210725
[2025-06-05 22:12:14] 2025-06-05 17:57:06,889 [wrapper] cleanup supervisor_pilot  7566 27298
[2025-06-05 22:12:14] 2025-06-05 17:57:06,979 [wrapper] Test setup, not cleaning
[2025-06-05 22:12:14] 2025-06-05 17:57:07,060 [wrapper] apfmon messages muted
[2025-06-05 22:12:14] 2025-06-05 17:57:07,116 [wrapper] ==== wrapper stdout END ====
[2025-06-05 22:12:14] 2025-06-05 17:57:07,184 [wrapper] ==== wrapper stderr END ====
[2025-06-05 22:12:14]  *** Error codes and diagnostics ***
[2025-06-05 22:12:14]     "exeErrorCode": 0,
[2025-06-05 22:12:14]     "exeErrorDiag": "",
[2025-06-05 22:12:14]     "pilotErrorCode": 0,
[2025-06-05 22:12:14]     "pilotErrorDiag": "",
[2025-06-05 22:12:14]  *** Listing of results directory ***
[2025-06-05 22:12:15] total 417444
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc    495897 May 28 08:52 pilot3.tar.gz
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc      5111 May 28 09:00 queuedata.json
[2025-06-05 22:12:15] -rwx------. 1 boinc boinc     37140 May 28 09:01 runpilot2-wrapper.sh
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc       100 Jun  5 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 22:12:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 14:51 run_atlas
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc       105 Jun  5 14:51 job.xml
[2025-06-05 22:12:15] -rw-r--r--. 2 boinc boinc 227529379 Jun  5 14:51 EVNT.44871834._003140.pool.root.1
[2025-06-05 22:12:15] -rw-r--r--. 2 boinc boinc    508882 Jun  5 14:51 input.tar.gz
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc      6391 Jun  5 14:51 init_data.xml
[2025-06-05 22:12:15] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:51 start_atlas.sh
[2025-06-05 22:12:15] drwxrwx--x. 2 boinc boinc        68 Jun  5 14:51 shared
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc         0 Jun  5 14:51 boinc_lockfile
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc      2558 Jun  5 14:51 pandaJob.out
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc    983210 Jun  5 14:51 agis_schedconf.cvmfs.json
[2025-06-05 22:12:15] drwx------. 4 boinc boinc      4096 Jun  5 14:51 pilot3
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc 192180829 Jun  5 19:54 HITS.44871837._080413.pool.root.1
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc       531 Jun  5 19:54 boinc_task_state.xml
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc      1028 Jun  5 19:55 memory_monitor_summary.json
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc   1598969 Jun  5 19:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc    408561 Jun  5 19:55 log.44871837._080413.job.log.tgz.1
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc        95 Jun  5 19:56 pilot_heartbeat.json
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc      7690 Jun  5 19:56 heartbeat.json
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc      4416 Jun  5 19:57 pilotlog.txt
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc   1558509 Jun  5 19:57 log.44871837._080413.job.log.1
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc       357 Jun  5 19:57 output.list
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc       620 Jun  5 19:57 runtime_log
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc   1986560 Jun  5 19:57 result.tar.gz
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc      8659 Jun  5 19:57 runtime_log.err
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc       657 Jun  5 19:57 kxDLDmMyPe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmu6SKDm12zFIn.diag
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc      8192 Jun  5 22:12 boinc_mmap_file
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc        28 Jun  5 22:12 wrapper_checkpoint.txt
[2025-06-05 22:12:15] -rw-r--r--. 1 boinc boinc     20487 Jun  5 22:12 stderr.txt
[2025-06-05 22:12:15] HITS file was successfully produced:
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc 192180829 Jun  5 19:54 shared/HITS.pool.root.1
[2025-06-05 22:12:15]  *** Contents of shared directory: ***
[2025-06-05 22:12:15] total 412336
[2025-06-05 22:12:15] -rw-r--r--. 2 boinc boinc 227529379 Jun  5 14:51 ATLAS.root_0
[2025-06-05 22:12:15] -rw-r--r--. 2 boinc boinc    508882 Jun  5 14:51 input.tar.gz
[2025-06-05 22:12:15] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:51 start_atlas.sh
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc 192180829 Jun  5 19:54 HITS.pool.root.1
[2025-06-05 22:12:15] -rw-------. 1 boinc boinc   1986560 Jun  5 19:57 result.tar.gz
22:12:16 (23330): run_atlas exited; CPU time 69366.733821
22:12:16 (23330): called boinc_finish(0)

</stderr_txt>
]]>

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