Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:17 (1412622): wrapper (7.7.26015): starting
08:39:17 (1412622): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 08:39:17] Arguments: --nthreads 10
[2025-06-05 08:39:17] Threads: 10
[2025-06-05 08:39:17] Checking for CVMFS
[2025-06-05 08:39:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 08:39:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 08:39:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 08:39:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 08:39:18] 2.12.6.0 6643 2788 264872 146819 3 529 25580288 32935936 31682 16776704 0 20566891 99.714 12972789 22418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 08:39:18] CVMFS is ok
[2025-06-05 08:39:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:39:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 08:39:18] Further information can be found at the LHC@home message board.
[2025-06-05 08:39:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:39:18] Checking for apptainer binary...
[2025-06-05 08:39:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 08:39:18] Running /usr/bin/apptainer --version
[2025-06-05 08:39:18] apptainer version 1.4.1-1.el9
[2025-06-05 08:39:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:39:18] c-3-40.aglt2.org
[2025-06-05 08:39:18] apptainer works
[2025-06-05 08:39:18] Set ATHENA_PROC_NUMBER=10
[2025-06-05 08:39:18] Set ATHENA_CORE_NUMBER=10
[2025-06-05 08:39:18] Starting ATLAS job with PandaID=6677734840
[2025-06-05 08:39:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:59:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:59:41]  guid=49e080eb-33a7-4353-ae55-4b2372cd61cf
[2025-06-05 09:59:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 09:59:41]  is_altstaged=None
[2025-06-05 09:59:41]  is_tar=False
[2025-06-05 09:59:41]  lfn=log.45006595._037918.job.log.tgz.1
[2025-06-05 09:59:41]  mtime=0
[2025-06-05 09:59:41]  protocol_id=None
[2025-06-05 09:59:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 09:59:41]  replicas=None
[2025-06-05 09:59:41]  scope=mc23_13p6TeV
[2025-06-05 09:59:41]  status=None
[2025-06-05 09:59:41]  status_code=0
[2025-06-05 09:59:41]  storage_token=
[2025-06-05 09:59:41]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677734840/log.45006595._037918.job.log.tgz.1
[2025-06-05 09:59:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/da/log.45006595._037918.job.log.tgz.1
[2025-06-05 09:59:41]  workdir=None
[2025-06-05 09:59:41] ]
[2025-06-05 09:59:41] 2025-06-05 13:59:21,346 | INFO     | transferring file log.45006595._037918.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677734840/log.45006595._037918.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 09:59:41] 2025-06-05 13:59:21,346 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677734840/log.45006595._037918.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._037918.job
[2025-06-05 09:59:41] 2025-06-05 13:59:21,370 | INFO     | adding to output.list: log.45006595._037918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/da/log.45006595._037918.job.log.tg
[2025-06-05 09:59:41] 2025-06-05 13:59:21,371 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 09:59:41] 2025-06-05 13:59:21,371 | INFO     | summary of transferred files:
[2025-06-05 09:59:41] 2025-06-05 13:59:21,371 | INFO     |  -- lfn=log.45006595._037918.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 09:59:41] 2025-06-05 13:59:21,372 | INFO     | stage-out finished correctly
[2025-06-05 09:59:41] 2025-06-05 13:59:21,463 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 09:59:41] 2025-06-05 13:59:21,582 | INFO     | job 6677734840 has state=finished
[2025-06-05 09:59:41] 2025-06-05 13:59:21,582 | INFO     | preparing for final server update for job 6677734840 in state='finished'
[2025-06-05 09:59:41] 2025-06-05 13:59:21,583 | INFO     | this job has now completed (state=finished)
[2025-06-05 09:59:41] 2025-06-05 13:59:21,583 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 09:59:41] 2025-06-05 13:59:21,583 | INFO     | log transfer has been attempted: DONE
[2025-06-05 09:59:41] 2025-06-05 13:59:21,584 | INFO     | job 6677734840 has finished - writing final server update
[2025-06-05 09:59:41] 2025-06-05 13:59:21,584 | INFO     | total number of processed events: 400 (read)
[2025-06-05 09:59:41] 2025-06-05 13:59:21,605 | INFO     | executing command: lscpu
[2025-06-05 09:59:41] 2025-06-05 13:59:21,702 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 09:59:41] 2025-06-05 13:59:22,158 | INFO     | PID=1419176 has CPU usage=16.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 09:59:41] 2025-06-05 13:59:22,158 | INFO     | .. there are 45 such processes running
[2025-06-05 09:59:41] 2025-06-05 13:59:23,337 | INFO     | monitor loop #325: job 0:6677734840 is in state 'finished'
[2025-06-05 09:59:41] 2025-06-05 13:59:23,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:59:41] 2025-06-05 13:59:25,844 | INFO     | monitor loop #326: job 0:6677734840 is in state 'finished'
[2025-06-05 09:59:41] 2025-06-05 13:59:25,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:59:41] 2025-06-05 13:59:27,479 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 09:59:41] 2025-06-05 13:59:27,480 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677734840/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:59:41] 2025-06-05 13:59:27,481 | INFO     | extracted standard info from prmon json
[2025-06-05 09:59:41] 2025-06-05 13:59:27,481 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:59:41] 2025-06-05 13:59:27,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:59:41] 2025-06-05 13:59:27,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:59:41] 2025-06-05 13:59:27,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:59:41] 2025-06-05 13:59:27,484 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:59:41] 2025-06-05 13:59:27,484 | INFO     | sum of square deviations: 115711449.9861112
[2025-06-05 09:59:41] 2025-06-05 13:59:27,485 | INFO     | sum of deviations: -6202675961.319443
[2025-06-05 09:59:41] 2025-06-05 13:59:27,485 | INFO     | mean x: 1749129668.5138888
[2025-06-05 09:59:41] 2025-06-05 13:59:27,485 | INFO     | mean y: 2317348.8194444445
[2025-06-05 09:59:41] 2025-06-05 13:59:27,485 | INFO     | -- intersect: 93763864278.04709
[2025-06-05 09:59:41] 2025-06-05 13:59:27,485 | INFO     | intersect: 93763864278.04709
[2025-06-05 09:59:41] 2025-06-05 13:59:27,485 | INFO     | chi2: 0.04203931942922064
[2025-06-05 09:59:41] 2025-06-05 13:59:27,485 | INFO     | -- intersect: 93763864278.04709
[2025-06-05 09:59:41] 2025-06-05 13:59:27,486 | INFO     | current memory leak: -53.60 B/s (using 72 data points, chi2=0.04)
[2025-06-05 09:59:41] 2025-06-05 13:59:27,486 | INFO     | ..............................
[2025-06-05 09:59:41] 2025-06-05 13:59:27,486 | INFO     | . Timing measurements:
[2025-06-05 09:59:41] 2025-06-05 13:59:27,487 | INFO     | . get job = 0 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,487 | INFO     | . initial setup = 2 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,487 | INFO     | . payload setup = 7 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,487 | INFO     | . stage-in = 0 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,487 | INFO     | . payload execution = 4764 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,487 | INFO     | . stage-out = 0 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,487 | INFO     | . log creation = 0 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,488 | INFO     | ..............................
[2025-06-05 09:59:41] 2025-06-05 13:59:27,930 | INFO     | 
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | job summary report
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | --------------------------------------------------
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | PanDA job id: 6677734840
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | task id: 45006595
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | errors: (none)
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | pilot state: finished 
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | transexitcode: 0
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | exeerrorcode: 0
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | exeerrordiag: 
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | exitcode: 0
[2025-06-05 09:59:41] 2025-06-05 13:59:27,931 | INFO     | exitmsg: OK
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | cpuconsumptiontime: 36701 s
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | nevents: 400
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | neventsw: 0
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | pid: 1442212
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | pgrp: 1442212
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | corecount: 10
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | event service: False
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | sizes: {0: 2397342, 5: 2397548, 11: 2397604, 4774: 2423685, 4776: 2432682, 4782: 2432796}
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | --------------------------------------------------
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | 
[2025-06-05 09:59:41] 2025-06-05 13:59:27,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 09:59:41] 2025-06-05 13:59:27,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,956 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,958 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:59:41] 2025-06-05 13:59:27,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:59:41] 2025-06-05 13:59:27,958 | INFO     | job 6677734840 has completed (purged errors)
[2025-06-05 09:59:41] 2025-06-05 13:59:27,958 | INFO     | overall cleanup function is called
[2025-06-05 09:59:41] 2025-06-05 13:59:28,966 | INFO     | --- collectZombieJob: --- 10, [1442212]
[2025-06-05 09:59:41] 2025-06-05 13:59:28,966 | INFO     | zombie collector waiting for pid 1442212
[2025-06-05 09:59:41] 2025-06-05 13:59:28,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:59:41] 2025-06-05 13:59:28,966 | INFO     | collected zombie processes
[2025-06-05 09:59:41] 2025-06-05 13:59:28,966 | INFO     | will attempt to kill all subprocesses of pid=1442212
[2025-06-05 09:59:41] 2025-06-05 13:59:29,465 | INFO     | process IDs to be killed: [1442212] (in reverse order)
[2025-06-05 09:59:41] 2025-06-05 13:59:29,611 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:59:41] 2025-06-05 13:59:29,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:59:41] 2025-06-05 13:59:29,626 | INFO     | did not find any defunct processes belonging to 1442212
[2025-06-05 09:59:41] 2025-06-05 13:59:29,639 | INFO     | did not find any defunct processes belonging to 1442212
[2025-06-05 09:59:41] 2025-06-05 13:59:29,639 | INFO     | ready for new job
[2025-06-05 09:59:41] 2025-06-05 13:59:29,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:59:41] 2025-06-05 13:59:29,641 | INFO     | **************************************
[2025-06-05 09:59:41] 2025-06-05 13:59:29,641 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:59:41] 2025-06-05 13:59:29,641 | INFO     | **************************************
[2025-06-05 09:59:41] 2025-06-05 13:59:29,641 | INFO     | 
[2025-06-05 09:59:41] 2025-06-05 13:59:29,658 | INFO     | architecture information:
[2025-06-05 09:59:41] 2025-06-05 13:59:29,658 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:59:41] 2025-06-05 13:59:29,671 | INFO     | cat /etc/os-release:
[2025-06-05 09:59:41] NAME="CentOS Linux"
[2025-06-05 09:59:41] VERSION="7 (Core)"
[2025-06-05 09:59:41] ID="centos"
[2025-06-05 09:59:41] ID_LIKE="rhel fedora"
[2025-06-05 09:59:41] VERSION_ID="7"
[2025-06-05 09:59:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:59:41] ANSI_COLOR="0;31"
[2025-06-05 09:59:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:59:41] HOME_URL="https://www.centos.org/"
[2025-06-05 09:59:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:59:41] 
[2025-06-05 09:59:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:59:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:59:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:59:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:59:41] 
[2025-06-05 09:59:41] 2025-06-05 13:59:29,671 | INFO     | **************************************
[2025-06-05 09:59:41] 2025-06-05 13:59:30,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 09:59:41] 2025-06-05 13:59:30,193 | INFO     | sufficient remaining disk space (75964088320 B)
[2025-06-05 09:59:41] 2025-06-05 13:59:30,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:59:41] 2025-06-05 13:59:30,194 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:59:41] 2025-06-05 13:59:30,194 | INFO     | update_server=False
[2025-06-05 09:59:41] 2025-06-05 13:59:30,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:59:41] 2025-06-05 13:59:30,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:59:41] 2025-06-05 13:59:30,195 | INFO     | aborting loop
[2025-06-05 09:59:41] 2025-06-05 13:59:30,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:59:41] 2025-06-05 13:59:30,195 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 09:59:41] 2025-06-05 13:59:30,195 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:59:41] 2025-06-05 13:59:30,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:59:41] 2025-06-05 13:59:30,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:59:41] 2025-06-05 13:59:30,983 | INFO     | all data control threads have been joined
[2025-06-05 09:59:41] 2025-06-05 13:59:31,200 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,201 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,269 | INFO     | all payload control threads have been joined
[2025-06-05 09:59:41] 2025-06-05 13:59:31,425 | INFO     | all job control threads have been joined
[2025-06-05 09:59:41] 2025-06-05 13:59:31,438 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,832 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,898 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,908 | INFO     | [job] validate thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,918 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:31,989 | INFO     | [data] control thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:32,093 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:32,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:59:41] 2025-06-05 13:59:32,201 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:32,221 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:32,275 | INFO     | [payload] control thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:32,430 | INFO     | [job] control thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:32,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:59:41] 2025-06-05 13:59:33,621 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:36,109 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:59:41] 2025-06-05 13:59:36,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483001993024)>', '<ExcThread(monitor, started 140482072016640)>']
[2025-06-05 09:59:41] 2025-06-05 13:59:36,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:59:41] 2025-06-05 13:59:36,230 | INFO     | [monitor] control thread has ended
[2025-06-05 09:59:41] 2025-06-05 13:59:41,186 | INFO     | all workflow threads have been joined
[2025-06-05 09:59:41] 2025-06-05 13:59:41,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:59:41] 2025-06-05 13:59:41,187 | INFO     | traces error code: 0
[2025-06-05 09:59:41] 2025-06-05 13:59:41,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:59:41] 2025-06-05 13:59:41,376 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:59:41] 2025-06-05 13:59:41,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:59:41] 2025-06-05 13:59:41,383 [wrapper] pilotpid: 1419176
[2025-06-05 09:59:41] 2025-06-05 13:59:41,386 [wrapper] Pilot exit status: 0
[2025-06-05 09:59:41] 2025-06-05 13:59:41,401 [wrapper] pandaids: 6677734840
[2025-06-05 09:59:41] 2025-06-05 13:59:41,504 [wrapper] cleanup supervisor_pilot 1995492 1419177
[2025-06-05 09:59:41] 2025-06-05 13:59:41,507 [wrapper] Test setup, not cleaning
[2025-06-05 09:59:41] 2025-06-05 13:59:41,510 [wrapper] apfmon messages muted
[2025-06-05 09:59:41] 2025-06-05 13:59:41,515 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:59:41] 2025-06-05 13:59:41,518 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:59:41]  *** Error codes and diagnostics ***
[2025-06-05 09:59:41]     "exeErrorCode": 0,
[2025-06-05 09:59:41]     "exeErrorDiag": "",
[2025-06-05 09:59:41]     "pilotErrorCode": 0,
[2025-06-05 09:59:41]     "pilotErrorDiag": "",
[2025-06-05 09:59:41]  *** Listing of results directory ***
[2025-06-05 09:59:41] total 392716
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:03 pilot3.tar.gz
[2025-06-05 09:59:41] -rwx------. 1 boincer umatlas     37140 Jun  3 12:06 runpilot2-wrapper.sh
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:06 queuedata.json
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas       100 Jun  5 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:59:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 08:39 run_atlas
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas       105 Jun  5 08:39 job.xml
[2025-06-05 09:59:41] -rw-r--r--. 2 boincer umatlas 216208929 Jun  5 08:39 EVNT.45006593._001522.pool.root.1
[2025-06-05 09:59:41] -rw-r--r--. 2 boincer umatlas    508886 Jun  5 08:39 input.tar.gz
[2025-06-05 09:59:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:39 start_atlas.sh
[2025-06-05 09:59:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 08:39 shared
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas         0 Jun  5 08:39 boinc_lockfile
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas      2525 Jun  5 08:39 pandaJob.out
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas    983210 Jun  5 08:39 agis_schedconf.cvmfs.json
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas   1598969 Jun  5 08:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:59:41] drwx------. 4 boincer umatlas      4096 Jun  5 08:39 pilot3
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 09:58 init_data.xml
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas 180524084 Jun  5 09:58 HITS.45006595._037918.pool.root.1
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas       529 Jun  5 09:58 boinc_task_state.xml
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas        95 Jun  5 09:58 pilot_heartbeat.json
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas      1043 Jun  5 09:59 memory_monitor_summary.json
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas    331869 Jun  5 09:59 log.45006595._037918.job.log.tgz.1
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas      7718 Jun  5 09:59 heartbeat.json
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 09:59 boinc_mmap_file
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas        27 Jun  5 09:59 wrapper_checkpoint.txt
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas      4476 Jun  5 09:59 pilotlog.txt
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas    453316 Jun  5 09:59 log.45006595._037918.job.log.1
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas       357 Jun  5 09:59 output.list
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas       620 Jun  5 09:59 runtime_log
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas    808960 Jun  5 09:59 result.tar.gz
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas      8651 Jun  5 09:59 runtime_log.err
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas       650 Jun  5 09:59 kDqNDmALjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpAZKDmgFg29m.diag
[2025-06-05 09:59:41] -rw-r--r--. 1 boincer umatlas     21398 Jun  5 09:59 stderr.txt
[2025-06-05 09:59:41] HITS file was successfully produced:
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas 180524084 Jun  5 09:58 shared/HITS.pool.root.1
[2025-06-05 09:59:41]  *** Contents of shared directory: ***
[2025-06-05 09:59:41] total 388752
[2025-06-05 09:59:41] -rw-r--r--. 2 boincer umatlas 216208929 Jun  5 08:39 ATLAS.root_0
[2025-06-05 09:59:41] -rw-r--r--. 2 boincer umatlas    508886 Jun  5 08:39 input.tar.gz
[2025-06-05 09:59:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:39 start_atlas.sh
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas 180524084 Jun  5 09:58 HITS.pool.root.1
[2025-06-05 09:59:41] -rw-------. 1 boincer umatlas    808960 Jun  5 09:59 result.tar.gz
09:59:43 (1412622): run_atlas exited; CPU time 36918.458228
09:59:43 (1412622): called boinc_finish(0)

</stderr_txt>
]]>

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