Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:38:59 (1406905): wrapper (7.7.26015): starting
08:38:59 (1406905): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 08:38:59] Arguments: --nthreads 10
[2025-06-05 08:38:59] Threads: 10
[2025-06-05 08:38:59] Checking for CVMFS
[2025-06-05 08:38:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 08:38:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 08:38:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 08:39:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 08:39:00] 2.12.6.0 6643 2787 262940 146819 0 526 25580288 32935936 31584 16776704 0 20552827 99.714 12972789 22418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 08:39:00] CVMFS is ok
[2025-06-05 08:39:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:39:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 08:39:00] Further information can be found at the LHC@home message board.
[2025-06-05 08:39:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:39:00] Checking for apptainer binary...
[2025-06-05 08:39:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 08:39:00] Running /usr/bin/apptainer --version
[2025-06-05 08:39:00] apptainer version 1.4.1-1.el9
[2025-06-05 08:39:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:39:00] c-3-40.aglt2.org
[2025-06-05 08:39:00] apptainer works
[2025-06-05 08:39:00] Set ATHENA_PROC_NUMBER=10
[2025-06-05 08:39:00] Set ATHENA_CORE_NUMBER=10
[2025-06-05 08:39:00] Starting ATLAS job with PandaID=6677617144
[2025-06-05 08:39:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:04:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:04:35]  lfn=log.45006595._031771.job.log.tgz.1
[2025-06-05 10:04:35]  mtime=0
[2025-06-05 10:04:35]  protocol_id=None
[2025-06-05 10:04:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 10:04:35]  replicas=None
[2025-06-05 10:04:35]  scope=mc23_13p6TeV
[2025-06-05 10:04:35]  status=None
[2025-06-05 10:04:35]  status_code=0
[2025-06-05 10:04:35]  storage_token=
[2025-06-05 10:04:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677617144/log.45006595._031771.job.log.tgz.1
[2025-06-05 10:04:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/63/log.45006595._031771.job.log.tgz.1
[2025-06-05 10:04:35]  workdir=None
[2025-06-05 10:04:35] ]
[2025-06-05 10:04:35] 2025-06-05 14:04:13,816 | INFO     | transferring file log.45006595._031771.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677617144/log.45006595._031771.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 10:04:35] 2025-06-05 14:04:13,816 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677617144/log.45006595._031771.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._031771.job
[2025-06-05 10:04:35] 2025-06-05 14:04:13,835 | INFO     | adding to output.list: log.45006595._031771.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/63/log.45006595._031771.job.log.tg
[2025-06-05 10:04:35] 2025-06-05 14:04:13,836 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 10:04:35] 2025-06-05 14:04:13,836 | INFO     | summary of transferred files:
[2025-06-05 10:04:35] 2025-06-05 14:04:13,836 | INFO     |  -- lfn=log.45006595._031771.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 10:04:35] 2025-06-05 14:04:13,837 | INFO     | stage-out finished correctly
[2025-06-05 10:04:35] 2025-06-05 14:04:13,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 10:04:35] 2025-06-05 14:04:15,915 | INFO     | monitor loop #346: job 0:6677617144 is in state 'finished'
[2025-06-05 10:04:35] 2025-06-05 14:04:15,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:04:35] 2025-06-05 14:04:16,141 | INFO     | PID=1410564 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 10:04:35] 2025-06-05 14:04:16,141 | INFO     | .. there are 44 such processes running
[2025-06-05 10:04:35] 2025-06-05 14:04:16,552 | INFO     | job 6677617144 has state=finished
[2025-06-05 10:04:35] 2025-06-05 14:04:16,552 | INFO     | preparing for final server update for job 6677617144 in state='finished'
[2025-06-05 10:04:35] 2025-06-05 14:04:16,553 | INFO     | this job has now completed (state=finished)
[2025-06-05 10:04:35] 2025-06-05 14:04:16,553 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 10:04:35] 2025-06-05 14:04:16,553 | INFO     | log transfer has been attempted: DONE
[2025-06-05 10:04:35] 2025-06-05 14:04:16,553 | INFO     | job 6677617144 has finished - writing final server update
[2025-06-05 10:04:35] 2025-06-05 14:04:16,553 | INFO     | total number of processed events: 400 (read)
[2025-06-05 10:04:35] 2025-06-05 14:04:16,569 | INFO     | executing command: lscpu
[2025-06-05 10:04:35] 2025-06-05 14:04:16,660 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 10:04:35] 2025-06-05 14:04:18,418 | INFO     | monitor loop #347: job 0:6677617144 is in state 'finished'
[2025-06-05 10:04:35] 2025-06-05 14:04:18,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:04:35] 2025-06-05 14:04:20,920 | INFO     | monitor loop #348: job 0:6677617144 is in state 'finished'
[2025-06-05 10:04:35] 2025-06-05 14:04:20,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:04:35] 2025-06-05 14:04:21,059 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 10:04:35] 2025-06-05 14:04:21,060 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677617144/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 10:04:35] 2025-06-05 14:04:21,061 | INFO     | extracted standard info from prmon json
[2025-06-05 10:04:35] 2025-06-05 14:04:21,061 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 10:04:35] 2025-06-05 14:04:21,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:04:35] 2025-06-05 14:04:21,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:04:35] 2025-06-05 14:04:21,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:04:35] 2025-06-05 14:04:21,064 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:04:35] 2025-06-05 14:04:21,064 | INFO     | sum of square deviations: 141539398.0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | sum of deviations: -3787393803.0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | mean x: 1749129803.0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | mean y: 2302373.74025974
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | -- intersect: 46806538297.68287
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | intersect: 46806538297.68287
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | chi2: 0.03395579322232416
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | -- intersect: 46806538297.68287
[2025-06-05 10:04:35] 2025-06-05 14:04:21,065 | INFO     | current memory leak: -26.76 B/s (using 77 data points, chi2=0.03)
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | ..............................
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . Timing measurements:
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . get job = 0 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . initial setup = 2 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . payload setup = 7 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . stage-in = 0 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . payload execution = 5073 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . stage-out = 0 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | . log creation = 0 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,066 | INFO     | ..............................
[2025-06-05 10:04:35] 2025-06-05 14:04:21,156 | INFO     | 
[2025-06-05 10:04:35] 2025-06-05 14:04:21,156 | INFO     | job summary report
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | --------------------------------------------------
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | PanDA job id: 6677617144
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | task id: 45006595
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | errors: (none)
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | pilot state: finished 
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | transexitcode: 0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | exeerrorcode: 0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | exeerrordiag: 
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | exitcode: 0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | exitmsg: OK
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | cpuconsumptiontime: 37636 s
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | nevents: 400
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | neventsw: 0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | pid: 1429068
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | pgrp: 1429068
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | corecount: 10
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | event service: False
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | sizes: {0: 2397342, 5: 2397548, 11: 2397604, 5084: 2423914, 5085: 2423913, 5086: 2433094, 5093: 2433208}
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | --------------------------------------------------
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | 
[2025-06-05 10:04:35] 2025-06-05 14:04:21,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:04:35] 2025-06-05 14:04:21,175 | INFO     | job 6677617144 has completed (purged errors)
[2025-06-05 10:04:35] 2025-06-05 14:04:21,176 | INFO     | overall cleanup function is called
[2025-06-05 10:04:35] 2025-06-05 14:04:22,183 | INFO     | --- collectZombieJob: --- 10, [1429068]
[2025-06-05 10:04:35] 2025-06-05 14:04:22,184 | INFO     | zombie collector waiting for pid 1429068
[2025-06-05 10:04:35] 2025-06-05 14:04:22,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:04:35] 2025-06-05 14:04:22,184 | INFO     | collected zombie processes
[2025-06-05 10:04:35] 2025-06-05 14:04:22,184 | INFO     | will attempt to kill all subprocesses of pid=1429068
[2025-06-05 10:04:35] 2025-06-05 14:04:22,646 | INFO     | process IDs to be killed: [1429068] (in reverse order)
[2025-06-05 10:04:35] 2025-06-05 14:04:22,796 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:04:35] 2025-06-05 14:04:22,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:04:35] 2025-06-05 14:04:22,815 | INFO     | did not find any defunct processes belonging to 1429068
[2025-06-05 10:04:35] 2025-06-05 14:04:22,833 | INFO     | did not find any defunct processes belonging to 1429068
[2025-06-05 10:04:35] 2025-06-05 14:04:22,833 | INFO     | ready for new job
[2025-06-05 10:04:35] 2025-06-05 14:04:22,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:04:35] 2025-06-05 14:04:22,836 | INFO     | **************************************
[2025-06-05 10:04:35] 2025-06-05 14:04:22,837 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:04:35] 2025-06-05 14:04:22,837 | INFO     | **************************************
[2025-06-05 10:04:35] 2025-06-05 14:04:22,837 | INFO     | 
[2025-06-05 10:04:35] 2025-06-05 14:04:22,854 | INFO     | architecture information:
[2025-06-05 10:04:35] 2025-06-05 14:04:22,854 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:04:35] 2025-06-05 14:04:22,868 | INFO     | cat /etc/os-release:
[2025-06-05 10:04:35] NAME="CentOS Linux"
[2025-06-05 10:04:35] VERSION="7 (Core)"
[2025-06-05 10:04:35] ID="centos"
[2025-06-05 10:04:35] ID_LIKE="rhel fedora"
[2025-06-05 10:04:35] VERSION_ID="7"
[2025-06-05 10:04:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:04:35] ANSI_COLOR="0;31"
[2025-06-05 10:04:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:04:35] HOME_URL="https://www.centos.org/"
[2025-06-05 10:04:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:04:35] 
[2025-06-05 10:04:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:04:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:04:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:04:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:04:35] 
[2025-06-05 10:04:35] 2025-06-05 14:04:22,868 | INFO     | **************************************
[2025-06-05 10:04:35] 2025-06-05 14:04:23,160 | INFO     | 5114s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 10:04:35] 2025-06-05 14:04:23,371 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 10:04:35] 2025-06-05 14:04:23,386 | INFO     | sufficient remaining disk space (76581699584 B)
[2025-06-05 10:04:35] 2025-06-05 14:04:23,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:04:35] 2025-06-05 14:04:23,387 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:04:35] 2025-06-05 14:04:23,387 | INFO     | update_server=False
[2025-06-05 10:04:35] 2025-06-05 14:04:23,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:04:35] 2025-06-05 14:04:23,424 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 10:04:35] 2025-06-05 14:04:23,424 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 10:04:35] 2025-06-05 14:04:23,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:04:35] 2025-06-05 14:04:23,424 | INFO     | will abort loop
[2025-06-05 10:04:35] 2025-06-05 14:04:23,842 | INFO     | all payload control threads have been joined
[2025-06-05 10:04:35] 2025-06-05 14:04:24,015 | INFO     | all data control threads have been joined
[2025-06-05 10:04:35] 2025-06-05 14:04:24,166 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:04:35] 2025-06-05 14:04:24,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:04:35] 2025-06-05 14:04:24,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:04:35] 2025-06-05 14:04:24,392 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:24,429 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:24,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:04:35] 2025-06-05 14:04:24,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:04:35] 2025-06-05 14:04:24,610 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:24,671 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:24,765 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:24,842 | INFO     | all job control threads have been joined
[2025-06-05 10:04:35] 2025-06-05 14:04:24,848 | INFO     | [payload] control thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:24,983 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:25,021 | INFO     | [data] control thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:25,113 | INFO     | [job] validate thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:25,312 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:25,374 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:25,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:25,848 | INFO     | [job] control thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:26,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:04:35] 2025-06-05 14:04:26,465 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:27,170 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:28,504 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:04:35] 2025-06-05 14:04:30,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540402157376)>', '<ExcThread(monitor, started 140539768854272)>']
[2025-06-05 10:04:35] 2025-06-05 14:04:31,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:04:35] 2025-06-05 14:04:31,198 | INFO     | [monitor] control thread has ended
[2025-06-05 10:04:35] 2025-06-05 14:04:35,574 | INFO     | all workflow threads have been joined
[2025-06-05 10:04:35] 2025-06-05 14:04:35,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:04:35] 2025-06-05 14:04:35,575 | INFO     | traces error code: 0
[2025-06-05 10:04:35] 2025-06-05 14:04:35,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:04:35] 2025-06-05 14:04:35,720 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:04:35] 2025-06-05 14:04:35,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:04:35] 2025-06-05 14:04:35,727 [wrapper] pilotpid: 1410564
[2025-06-05 10:04:35] 2025-06-05 14:04:35,729 [wrapper] Pilot exit status: 0
[2025-06-05 10:04:35] 2025-06-05 14:04:35,739 [wrapper] pandaids: 6677617144
[2025-06-05 10:04:35] 2025-06-05 14:04:35,837 [wrapper] cleanup supervisor_pilot 1995457 1410565
[2025-06-05 10:04:35] 2025-06-05 14:04:35,840 [wrapper] Test setup, not cleaning
[2025-06-05 10:04:35] 2025-06-05 14:04:35,843 [wrapper] apfmon messages muted
[2025-06-05 10:04:35] 2025-06-05 14:04:35,846 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:04:35] 2025-06-05 14:04:35,849 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:04:35]  *** Error codes and diagnostics ***
[2025-06-05 10:04:35]     "exeErrorCode": 0,
[2025-06-05 10:04:35]     "exeErrorDiag": "",
[2025-06-05 10:04:35]     "pilotErrorCode": 0,
[2025-06-05 10:04:35]     "pilotErrorDiag": "",
[2025-06-05 10:04:35]  *** Listing of results directory ***
[2025-06-05 10:04:35] total 398856
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:14 queuedata.json
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-05 10:04:35] -rwx------. 1 boincer umatlas     37140 Jun  3 08:14 runpilot2-wrapper.sh
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas       100 Jun  5 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:04:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 08:38 run_atlas
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas       105 Jun  5 08:38 job.xml
[2025-06-05 10:04:35] -rw-r--r--. 2 boincer umatlas 215216284 Jun  5 08:38 EVNT.45006593._001279.pool.root.1
[2025-06-05 10:04:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:38 start_atlas.sh
[2025-06-05 10:04:35] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 08:38 shared
[2025-06-05 10:04:35] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 08:38 input.tar.gz
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas         0 Jun  5 08:38 boinc_lockfile
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas      2525 Jun  5 08:39 pandaJob.out
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas    983210 Jun  5 08:39 agis_schedconf.cvmfs.json
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas   1598969 Jun  5 08:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:04:35] drwx------. 4 boincer umatlas      4096 Jun  5 08:39 pilot3
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 10:00 init_data.xml
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas       529 Jun  5 10:03 boinc_task_state.xml
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas 187761936 Jun  5 10:03 HITS.45006595._031771.pool.root.1
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas        95 Jun  5 10:03 pilot_heartbeat.json
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas      1044 Jun  5 10:04 memory_monitor_summary.json
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas    330295 Jun  5 10:04 log.45006595._031771.job.log.tgz.1
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas      7716 Jun  5 10:04 heartbeat.json
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas        27 Jun  5 10:04 wrapper_checkpoint.txt
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas      4654 Jun  5 10:04 pilotlog.txt
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 10:04 boinc_mmap_file
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas    477360 Jun  5 10:04 log.45006595._031771.job.log.1
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas       357 Jun  5 10:04 output.list
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas       620 Jun  5 10:04 runtime_log
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas    829440 Jun  5 10:04 result.tar.gz
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas       650 Jun  5 10:04 we8LDmRifg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5yjKDmfZGmWn.diag
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas      8651 Jun  5 10:04 runtime_log.err
[2025-06-05 10:04:35] -rw-r--r--. 1 boincer umatlas     21655 Jun  5 10:04 stderr.txt
[2025-06-05 10:04:35] HITS file was successfully produced:
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas 187761936 Jun  5 10:03 shared/HITS.pool.root.1
[2025-06-05 10:04:35]  *** Contents of shared directory: ***
[2025-06-05 10:04:35] total 394872
[2025-06-05 10:04:35] -rw-r--r--. 2 boincer umatlas 215216284 Jun  5 08:38 ATLAS.root_0
[2025-06-05 10:04:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:38 start_atlas.sh
[2025-06-05 10:04:35] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 08:38 input.tar.gz
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas 187761936 Jun  5 10:03 HITS.pool.root.1
[2025-06-05 10:04:35] -rw-------. 1 boincer umatlas    829440 Jun  5 10:04 result.tar.gz
10:04:37 (1406905): run_atlas exited; CPU time 37861.092580
10:04:37 (1406905): called boinc_finish(0)

</stderr_txt>
]]>

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