Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:08 (2738992): wrapper (7.7.26015): starting
08:39:08 (2738992): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 08:39:08] Arguments: --nthreads 12
[2025-06-05 08:39:08] Threads: 12
[2025-06-05 08:39:08] Checking for CVMFS
[2025-06-05 08:39:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 08:39:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 08:39:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 08:39:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 08:39:09] 2.12.6.0 4996 2201 111576 146819 1 272 31567402 32935936 11522 16776704 0 4647315 99.720 3974748 32576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 08:39:09] CVMFS is ok
[2025-06-05 08:39:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:39:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 08:39:09] Further information can be found at the LHC@home message board.
[2025-06-05 08:39:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:39:09] Checking for apptainer binary...
[2025-06-05 08:39:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 08:39:09] Running /usr/bin/apptainer --version
[2025-06-05 08:39:09] apptainer version 1.4.1-1.el9
[2025-06-05 08:39:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:39:09] c6-5-7-3.aglt2.org
[2025-06-05 08:39:09] apptainer works
[2025-06-05 08:39:09] Set ATHENA_PROC_NUMBER=12
[2025-06-05 08:39:09] Set ATHENA_CORE_NUMBER=12
[2025-06-05 08:39:09] Starting ATLAS job with PandaID=6677601717
[2025-06-05 08:39:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:25:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:25:41] 2025-06-05 14:25:28,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:25:41] 2025-06-05 14:25:28,073 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:25:41] 2025-06-05 14:25:28,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:25:41] 2025-06-05 14:25:28,075 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:25:41] 2025-06-05 14:25:28,076 | INFO     | sum of square deviations: 338767060.4271846
[2025-06-05 10:25:41] 2025-06-05 14:25:28,076 | INFO     | sum of deviations: -2249441207.2912626
[2025-06-05 10:25:41] 2025-06-05 14:25:28,076 | INFO     | mean x: 1749130344.3203883
[2025-06-05 10:25:41] 2025-06-05 14:25:28,076 | INFO     | mean y: 2417646.281553398
[2025-06-05 10:25:41] 2025-06-05 14:25:28,076 | INFO     | -- intersect: 11616787321.05559
[2025-06-05 10:25:41] 2025-06-05 14:25:28,076 | INFO     | intersect: 11616787321.05559
[2025-06-05 10:25:41] 2025-06-05 14:25:28,077 | INFO     | chi2: 1.9719643291672784
[2025-06-05 10:25:41] 2025-06-05 14:25:28,077 | INFO     | sum of square deviations: 291783914.0510213
[2025-06-05 10:25:41] 2025-06-05 14:25:28,077 | INFO     | sum of deviations: -1203747247.8877559
[2025-06-05 10:25:41] 2025-06-05 14:25:28,077 | INFO     | mean x: 1749130191.8265307
[2025-06-05 10:25:41] 2025-06-05 14:25:28,077 | INFO     | mean y: 2420981.4183673467
[2025-06-05 10:25:41] 2025-06-05 14:25:28,078 | INFO     | -- intersect: 7218413889.925309
[2025-06-05 10:25:41] 2025-06-05 14:25:28,078 | INFO     | intersect: 7218413889.925309
[2025-06-05 10:25:41] 2025-06-05 14:25:28,078 | INFO     | chi2: 1.974252457301137
[2025-06-05 10:25:41] 2025-06-05 14:25:28,078 | INFO     | current chi2=1.974252457301137 (change=-0.11603293731103817 %)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,078 | INFO     | right removable region: 97
[2025-06-05 10:25:41] 2025-06-05 14:25:28,078 | INFO     | sum of square deviations: 291770067.38775456
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | sum of deviations: -19625028798.469387
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | mean x: 1749130496.8367348
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | mean y: 2473123.4081632653
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | -- intersect: 117652431805.02536
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | intersect: 117652431805.02536
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | chi2: 0.23389697962644615
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | current chi2=0.23389697962644615 (change=88.13888384455635 %)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,079 | INFO     | sum of square deviations: 249343132.66666642
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | sum of deviations: -18727997047.66666
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | mean x: 1749130649.3333333
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | mean y: 2469717.6021505375
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | -- intersect: 131378510783.42923
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | intersect: 131378510783.42923
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | chi2: 0.2029553570060816
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | current chi2=0.2029553570060816 (change=13.228739708302777 %)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | left removable region: 20
[2025-06-05 10:25:41] 2025-06-05 14:25:28,080 | INFO     | sum of square deviations: 141512940.51948032
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | sum of deviations: -10309912965.103895
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | mean x: 1749130771.3116884
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | mean y: 2445055.337662338
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | -- intersect: 127435215165.33421
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | intersect: 127435215165.33421
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | chi2: 0.18107352359506687
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | -- intersect: 127435215165.33421
[2025-06-05 10:25:41] 2025-06-05 14:25:28,081 | INFO     | current memory leak: -72.85 B/s (using 77 data points, chi2=0.18)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | ..............................
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . Timing measurements:
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . get job = 0 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . initial setup = 3 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . payload setup = 18 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . stage-in = 0 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . payload execution = 6294 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . stage-out = 1 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | . log creation = 0 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,082 | INFO     | ..............................
[2025-06-05 10:25:41] 2025-06-05 14:25:28,109 | INFO     | sufficient remaining disk space (76363595776 B)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,110 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,111 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6677601717: 4504733 B (within 2537553920 B limit)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,111 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6677601717/HITS.45006595._031320.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,111 | INFO     | total size of present files: 0 B (workdir size: 4504733 B)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,111 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6677601717/HITS.45006595._031320.pool.root.1 since it does not exist
[2025-06-05 10:25:41] 2025-06-05 14:25:28,549 | INFO     | number of running child processes to parent process 2752210: 1
[2025-06-05 10:25:41] 2025-06-05 14:25:28,549 | INFO     | maximum number of monitored processes: 6
[2025-06-05 10:25:41] 2025-06-05 14:25:28,549 | INFO     | aborting job monitoring since job object (job id=6677601717) has expired
[2025-06-05 10:25:41] 2025-06-05 14:25:28,718 | INFO     | 
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | job summary report
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | --------------------------------------------------
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | PanDA job id: 6677601717
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | task id: 45006595
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | errors: (none)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | pilot state: finished 
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | transexitcode: 0
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | exeerrorcode: 0
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | exeerrordiag: 
[2025-06-05 10:25:41] 2025-06-05 14:25:28,719 | INFO     | exitcode: 0
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | exitmsg: OK
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | cpuconsumptiontime: 35427 s
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | nevents: 400
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | neventsw: 0
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | pid: 2752210
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | pgrp: 2752210
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | corecount: 12
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | event service: False
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | sizes: {0: 2396515, 1: 2397371, 2: 2397399, 7: 2397605, 12: 2397633, 6317: 2424544, 6320: 2433541, 6327: 2433683}
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | --------------------------------------------------
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | 
[2025-06-05 10:25:41] 2025-06-05 14:25:28,720 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 10:25:41] 2025-06-05 14:25:28,781 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,781 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,781 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,781 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,783 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,783 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,783 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:25:41] 2025-06-05 14:25:28,783 | INFO     | job 6677601717 has completed (purged errors)
[2025-06-05 10:25:41] 2025-06-05 14:25:28,783 | INFO     | overall cleanup function is called
[2025-06-05 10:25:41] 2025-06-05 14:25:29,796 | INFO     | --- collectZombieJob: --- 10, [2752210]
[2025-06-05 10:25:41] 2025-06-05 14:25:29,797 | INFO     | zombie collector waiting for pid 2752210
[2025-06-05 10:25:41] 2025-06-05 14:25:29,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:25:41] 2025-06-05 14:25:29,797 | INFO     | collected zombie processes
[2025-06-05 10:25:41] 2025-06-05 14:25:29,797 | INFO     | will attempt to kill all subprocesses of pid=2752210
[2025-06-05 10:25:41] 2025-06-05 14:25:30,051 | INFO     | process IDs to be killed: [2752210] (in reverse order)
[2025-06-05 10:25:41] 2025-06-05 14:25:30,185 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:25:41] 2025-06-05 14:25:30,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:25:41] 2025-06-05 14:25:30,198 | INFO     | did not find any defunct processes belonging to 2752210
[2025-06-05 10:25:41] 2025-06-05 14:25:30,211 | INFO     | did not find any defunct processes belonging to 2752210
[2025-06-05 10:25:41] 2025-06-05 14:25:30,212 | INFO     | ready for new job
[2025-06-05 10:25:41] 2025-06-05 14:25:30,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:25:41] 2025-06-05 14:25:30,216 | INFO     | **************************************
[2025-06-05 10:25:41] 2025-06-05 14:25:30,216 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:25:41] 2025-06-05 14:25:30,216 | INFO     | **************************************
[2025-06-05 10:25:41] 2025-06-05 14:25:30,217 | INFO     | 
[2025-06-05 10:25:41] 2025-06-05 14:25:30,234 | INFO     | architecture information:
[2025-06-05 10:25:41] 2025-06-05 14:25:30,243 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:25:41] 2025-06-05 14:25:30,300 | INFO     | cat /etc/os-release:
[2025-06-05 10:25:41] NAME="CentOS Linux"
[2025-06-05 10:25:41] VERSION="7 (Core)"
[2025-06-05 10:25:41] ID="centos"
[2025-06-05 10:25:41] ID_LIKE="rhel fedora"
[2025-06-05 10:25:41] VERSION_ID="7"
[2025-06-05 10:25:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:25:41] ANSI_COLOR="0;31"
[2025-06-05 10:25:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:25:41] HOME_URL="https://www.centos.org/"
[2025-06-05 10:25:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:25:41] 
[2025-06-05 10:25:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:25:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:25:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:25:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:25:41] 
[2025-06-05 10:25:41] 2025-06-05 14:25:30,300 | INFO     | **************************************
[2025-06-05 10:25:41] 2025-06-05 14:25:30,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 10:25:41] 2025-06-05 14:25:30,850 | INFO     | sufficient remaining disk space (76367790080 B)
[2025-06-05 10:25:41] 2025-06-05 14:25:30,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:25:41] 2025-06-05 14:25:30,851 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:25:41] 2025-06-05 14:25:30,851 | INFO     | update_server=False
[2025-06-05 10:25:41] 2025-06-05 14:25:30,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:25:41] 2025-06-05 14:25:30,851 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 10:25:41] 2025-06-05 14:25:30,852 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:25:41] 2025-06-05 14:25:30,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:25:41] 2025-06-05 14:25:30,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:25:41] 2025-06-05 14:25:31,057 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 10:25:41] 2025-06-05 14:25:31,058 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 10:25:41] 2025-06-05 14:25:31,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:25:41] 2025-06-05 14:25:31,058 | INFO     | will abort loop
[2025-06-05 10:25:41] 2025-06-05 14:25:31,125 | INFO     | all data control threads have been joined
[2025-06-05 10:25:41] 2025-06-05 14:25:31,828 | INFO     | all payload control threads have been joined
[2025-06-05 10:25:41] 2025-06-05 14:25:31,857 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:31,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:25:41] 2025-06-05 14:25:31,986 | INFO     | all job control threads have been joined
[2025-06-05 10:25:41] 2025-06-05 14:25:32,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:25:41] 2025-06-05 14:25:32,068 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,098 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,102 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,132 | INFO     | [data] control thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,177 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,605 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,687 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,835 | INFO     | [payload] control thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:32,992 | INFO     | [job] control thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:33,004 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:33,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:25:41] 2025-06-05 14:25:33,336 | INFO     | [job] validate thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:33,338 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:33,968 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:34,322 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:36,060 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:25:41] 2025-06-05 14:25:36,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199023486784)>', '<ExcThread(monitor, started 140198369277696)>']
[2025-06-05 10:25:41] 2025-06-05 14:25:36,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:25:41] 2025-06-05 14:25:36,885 | INFO     | [monitor] control thread has ended
[2025-06-05 10:25:41] 2025-06-05 14:25:41,321 | INFO     | all workflow threads have been joined
[2025-06-05 10:25:41] 2025-06-05 14:25:41,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:25:41] 2025-06-05 14:25:41,322 | INFO     | traces error code: 0
[2025-06-05 10:25:41] 2025-06-05 14:25:41,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:25:41] 2025-06-05 14:25:41,531 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:25:41] 2025-06-05 14:25:41,535 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:25:41] 2025-06-05 14:25:41,538 [wrapper] pilotpid: 2743115
[2025-06-05 10:25:41] 2025-06-05 14:25:41,541 [wrapper] Pilot exit status: 0
[2025-06-05 10:25:41] 2025-06-05 14:25:41,553 [wrapper] pandaids: 6677601717
[2025-06-05 10:25:41] 2025-06-05 14:25:41,615 [wrapper] cleanup supervisor_pilot 2958348 2743116
[2025-06-05 10:25:41] 2025-06-05 14:25:41,618 [wrapper] Test setup, not cleaning
[2025-06-05 10:25:41] 2025-06-05 14:25:41,627 [wrapper] apfmon messages muted
[2025-06-05 10:25:41] 2025-06-05 14:25:41,629 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:25:41] 2025-06-05 14:25:41,632 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:25:41]  *** Error codes and diagnostics ***
[2025-06-05 10:25:41]     "exeErrorCode": 0,
[2025-06-05 10:25:41]     "exeErrorDiag": "",
[2025-06-05 10:25:41]     "pilotErrorCode": 0,
[2025-06-05 10:25:41]     "pilotErrorDiag": "",
[2025-06-05 10:25:41]  *** Listing of results directory ***
[2025-06-05 10:25:41] total 389348
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 07:50 queuedata.json
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-05 10:25:41] -rwx------. 1 boincer umatlas     37140 Jun  3 07:52 runpilot2-wrapper.sh
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas       100 Jun  5 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:25:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 08:39 run_atlas
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas       105 Jun  5 08:39 job.xml
[2025-06-05 10:25:41] -rw-r--r--. 2 boincer umatlas 215409758 Jun  5 08:39 EVNT.45006593._001259.pool.root.1
[2025-06-05 10:25:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:39 start_atlas.sh
[2025-06-05 10:25:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 08:39 shared
[2025-06-05 10:25:41] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 08:39 input.tar.gz
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas         0 Jun  5 08:39 boinc_lockfile
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas      2526 Jun  5 08:39 pandaJob.out
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas    983210 Jun  5 08:39 agis_schedconf.cvmfs.json
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas   1598969 Jun  5 08:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:25:41] drwx------. 4 boincer umatlas      4096 Jun  5 08:39 pilot3
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 10:22 init_data.xml
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas        95 Jun  5 10:24 pilot_heartbeat.json
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas 177534916 Jun  5 10:24 HITS.45006595._031320.pool.root.1
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas       530 Jun  5 10:24 boinc_task_state.xml
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas      1040 Jun  5 10:25 memory_monitor_summary.json
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas    379028 Jun  5 10:25 log.45006595._031320.job.log.tgz.1
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas      7722 Jun  5 10:25 heartbeat.json
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas        27 Jun  5 10:25 wrapper_checkpoint.txt
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 10:25 boinc_mmap_file
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas      4662 Jun  5 10:25 pilotlog.txt
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas    577931 Jun  5 10:25 log.45006595._031320.job.log.1
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas       357 Jun  5 10:25 output.list
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas       620 Jun  5 10:25 runtime_log
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas    972800 Jun  5 10:25 result.tar.gz
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas      8661 Jun  5 10:25 runtime_log.err
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas       653 Jun  5 10:25 MeVLDmFNfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJtjKDmGcvlGn.diag
[2025-06-05 10:25:41] -rw-r--r--. 1 boincer umatlas     21357 Jun  5 10:25 stderr.txt
[2025-06-05 10:25:41] HITS file was successfully produced:
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas 177534916 Jun  5 10:24 shared/HITS.pool.root.1
[2025-06-05 10:25:41]  *** Contents of shared directory: ***
[2025-06-05 10:25:41] total 385216
[2025-06-05 10:25:41] -rw-r--r--. 2 boincer umatlas 215409758 Jun  5 08:39 ATLAS.root_0
[2025-06-05 10:25:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:39 start_atlas.sh
[2025-06-05 10:25:41] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 08:39 input.tar.gz
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas 177534916 Jun  5 10:24 HITS.pool.root.1
[2025-06-05 10:25:41] -rw-------. 1 boincer umatlas    972800 Jun  5 10:25 result.tar.gz
10:25:42 (2738992): run_atlas exited; CPU time 35537.373691
10:25:42 (2738992): called boinc_finish(0)

</stderr_txt>
]]>

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