Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:49:33 (18443): wrapper (7.7.26015): starting
18:49:33 (18443): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 18:49:33] Arguments: --nthreads 8
[2025-06-05 18:49:33] Threads: 8
[2025-06-05 18:49:33] Checking for CVMFS
[2025-06-05 18:49:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 18:49:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 18:49:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 18:49:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 18:49:37] 2.11.2.0 555 35021 98988 146826 3 16 16366818 25165825 3519 130560 0 18673745 99.825 21129593 2735 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 18:49:37] CVMFS is ok
[2025-06-05 18:49:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:49:37] Checking for apptainer binary...
[2025-06-05 18:49:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 18:49:37] Running /usr/bin/apptainer --version
[2025-06-05 18:49:37] apptainer version 1.3.2-1.el7
[2025-06-05 18:49:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:13:13] cg-vwn340.simple-grid.lan
[2025-06-05 20:13:13] apptainer works
[2025-06-05 20:13:13] Set ATHENA_PROC_NUMBER=8
[2025-06-05 20:13:13] Set ATHENA_CORE_NUMBER=8
[2025-06-05 20:13:13] Starting ATLAS job with PandaID=6668192234
[2025-06-05 20:13:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:18:00]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:18:00] 2025-06-05 23:28:51,987 | INFO     | extracted standard info from prmon json
[2025-06-06 04:18:00] 2025-06-05 23:28:51,988 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 04:18:00] 2025-06-05 23:28:51,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:18:00] 2025-06-05 23:28:51,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:18:00] 2025-06-05 23:28:51,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:18:00] 2025-06-05 23:28:51,994 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:18:00] 2025-06-05 23:28:51,995 | INFO     | sum of square deviations: 9059954057.0
[2025-06-06 04:18:00] 2025-06-05 23:28:51,998 | INFO     | sum of deviations: -51694662585.0
[2025-06-06 04:18:00] 2025-06-05 23:28:51,999 | INFO     | mean x: 1749156655.5
[2025-06-06 04:18:00] 2025-06-05 23:28:51,999 | INFO     | mean y: 2522360.090909091
[2025-06-06 04:18:00] 2025-06-05 23:28:51,999 | INFO     | -- intersect: 9982933137.617613
[2025-06-06 04:18:00] 2025-06-05 23:28:51,999 | INFO     | intersect: 9982933137.617613
[2025-06-06 04:18:00] 2025-06-05 23:28:51,999 | INFO     | chi2: 2.630718485767437
[2025-06-06 04:18:00] 2025-06-05 23:28:52,006 | INFO     | sum of square deviations: 8625843592.0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,009 | INFO     | sum of deviations: -30434533397.000008
[2025-06-06 04:18:00] 2025-06-05 23:28:52,009 | INFO     | mean x: 1749156503.0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,009 | INFO     | mean y: 2529734.306930693
[2025-06-06 04:18:00] 2025-06-05 23:28:52,010 | INFO     | -- intersect: 6174072429.157738
[2025-06-06 04:18:00] 2025-06-05 23:28:52,010 | INFO     | intersect: 6174072429.157738
[2025-06-06 04:18:00] 2025-06-05 23:28:52,010 | INFO     | chi2: 1.8637269245615427
[2025-06-06 04:18:00] 2025-06-05 23:28:52,010 | INFO     | current chi2=1.8637269245615427 (change=29.155212363292698 %)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,011 | INFO     | sum of square deviations: 8205826414.5
[2025-06-06 04:18:00] 2025-06-05 23:28:52,014 | INFO     | sum of deviations: -29709607017.999992
[2025-06-06 04:18:00] 2025-06-05 23:28:52,014 | INFO     | mean x: 1749156350.5
[2025-06-06 04:18:00] 2025-06-05 23:28:52,014 | INFO     | mean y: 2529997.7315436243
[2025-06-06 04:18:00] 2025-06-05 23:28:52,014 | INFO     | -- intersect: 6335438489.991004
[2025-06-06 04:18:00] 2025-06-05 23:28:52,014 | INFO     | intersect: 6335438489.991004
[2025-06-06 04:18:00] 2025-06-05 23:28:52,015 | INFO     | chi2: 1.8627470194499018
[2025-06-06 04:18:00] 2025-06-05 23:28:52,015 | INFO     | current chi2=1.8627470194499018 (change=0.05257771933897138 %)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,015 | INFO     | right removable region: 297
[2025-06-06 04:18:00] 2025-06-05 23:28:52,015 | INFO     | sum of square deviations: 8625843592.0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,018 | INFO     | sum of deviations: -102292433296.00002
[2025-06-06 04:18:00] 2025-06-05 23:28:52,018 | INFO     | mean x: 1749156808.0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,018 | INFO     | mean y: 2540017.693069307
[2025-06-06 04:18:00] 2025-06-05 23:28:52,019 | INFO     | -- intersect: 20745497410.582497
[2025-06-06 04:18:00] 2025-06-05 23:28:52,019 | INFO     | intersect: 20745497410.582497
[2025-06-06 04:18:00] 2025-06-05 23:28:52,019 | INFO     | chi2: 1.0890289643840345
[2025-06-06 04:18:00] 2025-06-05 23:28:52,019 | INFO     | current chi2=1.0890289643840345 (change=58.60336367133782 %)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,020 | INFO     | sum of square deviations: 8205826414.5
[2025-06-06 04:18:00] 2025-06-05 23:28:52,029 | INFO     | sum of deviations: -107959001394.99997
[2025-06-06 04:18:00] 2025-06-05 23:28:52,029 | INFO     | mean x: 1749156960.5
[2025-06-06 04:18:00] 2025-06-05 23:28:52,029 | INFO     | mean y: 2542074.953020134
[2025-06-06 04:18:00] 2025-06-05 23:28:52,029 | INFO     | -- intersect: 23015122307.58029
[2025-06-06 04:18:00] 2025-06-05 23:28:52,029 | INFO     | intersect: 23015122307.58029
[2025-06-06 04:18:00] 2025-06-05 23:28:52,030 | INFO     | chi2: 1.0526355163235965
[2025-06-06 04:18:00] 2025-06-05 23:28:52,030 | INFO     | current chi2=1.0526355163235965 (change=3.3418255391418787 %)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,030 | INFO     | left removable region: 20
[2025-06-06 04:18:00] 2025-06-05 23:28:52,031 | INFO     | sum of square deviations: 6590404498.0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,033 | INFO     | sum of deviations: -68252009522.00001
[2025-06-06 04:18:00] 2025-06-05 23:28:52,033 | INFO     | mean x: 1749156930.0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,033 | INFO     | mean y: 2544063.85198556
[2025-06-06 04:18:00] 2025-06-05 23:28:52,033 | INFO     | -- intersect: 18117285803.61345
[2025-06-06 04:18:00] 2025-06-05 23:28:52,033 | INFO     | intersect: 18117285803.61345
[2025-06-06 04:18:00] 2025-06-05 23:28:52,034 | INFO     | chi2: 0.25026809106294245
[2025-06-06 04:18:00] 2025-06-05 23:28:52,034 | INFO     | -- intersect: 18117285803.61345
[2025-06-06 04:18:00] 2025-06-05 23:28:52,034 | INFO     | current memory leak: -10.36 B/s (using 277 data points, chi2=0.25)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,035 | INFO     | ..............................
[2025-06-06 04:18:00] 2025-06-05 23:28:52,035 | INFO     | . Timing measurements:
[2025-06-06 04:18:00] 2025-06-05 23:28:52,035 | INFO     | . get job = 0 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,035 | INFO     | . initial setup = 2 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,035 | INFO     | . payload setup = 13 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,035 | INFO     | . stage-in = 0 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,036 | INFO     | . payload execution = 18767 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,036 | INFO     | . stage-out = 3 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,036 | INFO     | . log creation = 1 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,036 | INFO     | ..............................
[2025-06-06 04:18:00] 2025-06-05 23:28:52,214 | INFO     | 
[2025-06-06 04:18:00] 2025-06-05 23:28:52,214 | INFO     | job summary report
[2025-06-06 04:18:00] 2025-06-05 23:28:52,214 | INFO     | --------------------------------------------------
[2025-06-06 04:18:00] 2025-06-05 23:28:52,214 | INFO     | PanDA job id: 6668192234
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | task id: 44871837
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | errors: (none)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | pilot state: finished 
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | transexitcode: 0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | exeerrorcode: 0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | exeerrordiag: 
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | exitcode: 0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | exitmsg: OK
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | cpuconsumptiontime: 71715 s
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | nevents: 400
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | neventsw: 0
[2025-06-06 04:18:00] 2025-06-05 23:28:52,215 | INFO     | pid: 10244
[2025-06-06 04:18:00] 2025-06-05 23:28:52,216 | INFO     | pgrp: 10244
[2025-06-06 04:18:00] 2025-06-05 23:28:52,216 | INFO     | corecount: 8
[2025-06-06 04:18:00] 2025-06-05 23:28:52,216 | INFO     | event service: False
[2025-06-06 04:18:00] 2025-06-05 23:28:52,216 | INFO     | sizes: {0: 2396564, 1: 2397421, 2: 2397421, 12: 2397449, 13: 2397683, 23: 2397739, 18784: 2429640, 18785: 2429639, 18789: 2438638, 18793: 2438722, 18877: 2438892}
[2025-06-06 04:18:00] 2025-06-05 23:28:52,216 | INFO     | --------------------------------------------------
[2025-06-06 04:18:00] 2025-06-05 23:28:52,216 | INFO     | 
[2025-06-06 04:18:00] 2025-06-05 23:28:52,216 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-06 04:18:00] 2025-06-05 23:28:52,670 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:18:00] 2025-06-05 23:28:52,672 | INFO     | job 6668192234 has completed (purged errors)
[2025-06-06 04:18:00] 2025-06-05 23:28:52,673 | INFO     | overall cleanup function is called
[2025-06-06 04:18:00] 2025-06-05 23:28:53,682 | INFO     | --- collectZombieJob: --- 10, [10244]
[2025-06-06 04:18:00] 2025-06-05 23:28:53,683 | INFO     | zombie collector waiting for pid 10244
[2025-06-06 04:18:00] 2025-06-05 23:28:53,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:18:00] 2025-06-05 23:28:53,683 | INFO     | collected zombie processes
[2025-06-06 04:18:00] 2025-06-05 23:28:53,683 | INFO     | will attempt to kill all subprocesses of pid=10244
[2025-06-06 04:18:00] 2025-06-05 23:28:53,820 | INFO     | process IDs to be killed: [10244] (in reverse order)
[2025-06-06 04:18:00] 2025-06-05 23:28:54,658 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:18:00] 2025-06-05 23:28:54,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:18:00] 2025-06-05 23:28:54,662 | INFO     | did not find any defunct processes belonging to 10244
[2025-06-06 04:18:00] 2025-06-05 23:28:54,665 | INFO     | did not find any defunct processes belonging to 10244
[2025-06-06 04:18:00] 2025-06-05 23:28:54,665 | INFO     | ready for new job
[2025-06-06 04:18:00] 2025-06-05 23:28:54,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:18:00] 2025-06-05 23:28:54,668 | INFO     | **************************************
[2025-06-06 04:18:00] 2025-06-05 23:28:54,668 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:18:00] 2025-06-05 23:28:54,668 | INFO     | **************************************
[2025-06-06 04:18:00] 2025-06-05 23:28:54,668 | INFO     | 
[2025-06-06 04:18:00] 2025-06-05 23:28:54,669 | INFO     | pilot is running in a VM
[2025-06-06 04:18:00] 2025-06-05 23:28:54,669 | INFO     | architecture information:
[2025-06-06 04:18:00] 2025-06-05 23:28:54,676 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:18:00] 2025-06-05 23:28:54,809 | INFO     | cat /etc/os-release:
[2025-06-06 04:18:00] NAME="CentOS Linux"
[2025-06-06 04:18:00] VERSION="7 (Core)"
[2025-06-06 04:18:00] ID="centos"
[2025-06-06 04:18:00] ID_LIKE="rhel fedora"
[2025-06-06 04:18:00] VERSION_ID="7"
[2025-06-06 04:18:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:18:00] ANSI_COLOR="0;31"
[2025-06-06 04:18:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:18:00] HOME_URL="https://www.centos.org/"
[2025-06-06 04:18:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:18:00] 
[2025-06-06 04:18:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:18:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:18:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:18:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:18:00] 
[2025-06-06 04:18:00] 2025-06-05 23:28:54,809 | INFO     | **************************************
[2025-06-06 04:18:00] 2025-06-05 23:28:55,313 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-06 04:18:00] 2025-06-05 23:28:55,549 | INFO     | sufficient remaining disk space (496810065920 B)
[2025-06-06 04:18:00] 2025-06-05 23:28:55,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:18:00] 2025-06-05 23:28:55,549 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:18:00] 2025-06-05 23:28:55,549 | INFO     | update_server=False
[2025-06-06 04:18:00] 2025-06-05 23:28:55,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:18:00] 2025-06-05 23:28:55,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:18:00] 2025-06-05 23:28:55,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:18:00] 2025-06-05 23:28:55,557 | INFO     | aborting loop
[2025-06-06 04:18:00] 2025-06-05 23:28:55,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:18:00] 2025-06-05 23:28:55,566 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 04:18:00] 2025-06-05 23:28:55,567 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:18:00] 2025-06-05 23:28:55,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:18:00] 2025-06-05 23:28:55,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:18:00] 2025-06-05 23:28:56,242 | INFO     | all payload control threads have been joined
[2025-06-06 04:18:00] 2025-06-05 23:28:56,496 | INFO     | all job control threads have been joined
[2025-06-06 04:18:00] 2025-06-05 23:28:56,555 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:56,559 | INFO     | all data control threads have been joined
[2025-06-06 04:18:00] 2025-06-05 23:28:56,563 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:56,632 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:56,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:56,902 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,053 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,092 | INFO     | [job] validate thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,153 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:18:00] 2025-06-05 23:28:57,248 | INFO     | [payload] control thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,399 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,502 | INFO     | [job] control thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,565 | INFO     | [data] control thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:57,571 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:58,127 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:58,233 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:28:59,559 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:18:00] 2025-06-05 23:29:00,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754736166720)>', '<ExcThread(monitor, started 139753898878720)>']
[2025-06-06 04:18:00] 2025-06-05 23:29:01,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:18:00] 2025-06-05 23:29:01,604 | INFO     | [monitor] control thread has ended
[2025-06-06 04:18:00] 2025-06-05 23:29:05,811 | INFO     | all workflow threads have been joined
[2025-06-06 04:18:00] 2025-06-05 23:29:05,811 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:18:00] 2025-06-05 23:29:05,812 | INFO     | traces error code: 0
[2025-06-06 04:18:00] 2025-06-05 23:29:05,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:18:00] 2025-06-05 23:29:06,180 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:18:00] 2025-06-05 23:29:06,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:18:00] 2025-06-05 23:29:06,286 [wrapper] pilotpid: 1743
[2025-06-06 04:18:00] 2025-06-05 23:29:06,345 [wrapper] Pilot exit status: 0
[2025-06-06 04:18:00] 2025-06-05 23:29:06,628 [wrapper] pandaids: 6668192234
[2025-06-06 04:18:00] 2025-06-05 23:29:06,671 [wrapper] cleanup supervisor_pilot 18217 1744
[2025-06-06 04:18:00] 2025-06-05 23:29:06,705 [wrapper] Test setup, not cleaning
[2025-06-06 04:18:00] 2025-06-05 23:29:06,774 [wrapper] apfmon messages muted
[2025-06-06 04:18:00] 2025-06-05 23:29:06,823 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:18:00] 2025-06-05 23:29:06,915 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:18:00]  *** Error codes and diagnostics ***
[2025-06-06 04:18:00]     "exeErrorCode": 0,
[2025-06-06 04:18:00]     "exeErrorDiag": "",
[2025-06-06 04:18:00]     "pilotErrorCode": 0,
[2025-06-06 04:18:00]     "pilotErrorDiag": "",
[2025-06-06 04:18:00]  *** Listing of results directory ***
[2025-06-06 04:18:00] total 423736
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc    495897 May 28 08:52 pilot3.tar.gz
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc      5111 May 28 08:57 queuedata.json
[2025-06-06 04:18:00] -rwx------. 1 boinc boinc     37140 May 28 08:57 runpilot2-wrapper.sh
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc       100 Jun  5 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:18:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 18:49 run_atlas
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc       105 Jun  5 18:49 job.xml
[2025-06-06 04:18:00] -rw-r--r--. 2 boinc boinc 226836851 Jun  5 18:49 EVNT.44871834._003134.pool.root.1
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc      6391 Jun  5 18:49 init_data.xml
[2025-06-06 04:18:00] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:49 start_atlas.sh
[2025-06-06 04:18:00] drwxrwx--x. 2 boinc boinc        68 Jun  5 18:49 shared
[2025-06-06 04:18:00] -rw-r--r--. 2 boinc boinc    508879 Jun  5 18:49 input.tar.gz
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc         0 Jun  5 18:49 boinc_lockfile
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc      2559 Jun  5 20:13 pandaJob.out
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc    987543 Jun  5 20:13 agis_schedconf.cvmfs.json
[2025-06-06 04:18:00] drwx------. 4 boinc boinc      4096 Jun  5 20:13 pilot3
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc 199151272 Jun  6 01:26 HITS.44871837._080258.pool.root.1
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc       531 Jun  6 01:26 boinc_task_state.xml
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc      1015 Jun  6 01:27 memory_monitor_summary.json
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc   1598969 Jun  6 01:27 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc    430315 Jun  6 01:27 log.44871837._080258.job.log.tgz.1
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc        95 Jun  6 01:28 pilot_heartbeat.json
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc      7691 Jun  6 01:28 heartbeat.json
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc      4540 Jun  6 01:29 pilotlog.txt
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc   1617348 Jun  6 01:29 log.44871837._080258.job.log.1
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc       357 Jun  6 01:29 output.list
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc       620 Jun  6 01:29 runtime_log
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc   2068480 Jun  6 01:29 result.tar.gz
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc       657 Jun  6 01:29 y58MDmauPe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmw5SKDmK4lpEm.diag
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc      8673 Jun  6 01:29 runtime_log.err
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc      8192 Jun  6 04:18 boinc_mmap_file
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc        28 Jun  6 04:18 wrapper_checkpoint.txt
[2025-06-06 04:18:00] -rw-r--r--. 1 boinc boinc     20513 Jun  6 04:18 stderr.txt
[2025-06-06 04:18:00] HITS file was successfully produced:
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc 199151272 Jun  6 01:26 shared/HITS.pool.root.1
[2025-06-06 04:18:00]  *** Contents of shared directory: ***
[2025-06-06 04:18:00] total 418544
[2025-06-06 04:18:00] -rw-r--r--. 2 boinc boinc 226836851 Jun  5 18:49 ATLAS.root_0
[2025-06-06 04:18:00] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:49 start_atlas.sh
[2025-06-06 04:18:00] -rw-r--r--. 2 boinc boinc    508879 Jun  5 18:49 input.tar.gz
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc 199151272 Jun  6 01:26 HITS.pool.root.1
[2025-06-06 04:18:00] -rw-------. 1 boinc boinc   2068480 Jun  6 01:29 result.tar.gz
04:18:02 (18443): run_atlas exited; CPU time 71946.616713
04:18:02 (18443): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN