Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:05 (1757063): wrapper (7.7.26015): starting
08:14:05 (1757063): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 08:14:05] Arguments: --nthreads 10
[2025-06-05 08:14:05] Threads: 10
[2025-06-05 08:14:05] Checking for CVMFS
[2025-06-05 08:14:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 08:14:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 08:14:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 08:14:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 08:14:06] 2.12.6.0 1085289 2202 171956 146818 3 269 16142300 18491392 19089 16776704 0 6409647 98.252 21841975 30041 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 08:14:06] CVMFS is ok
[2025-06-05 08:14:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:14:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 08:14:06] Further information can be found at the LHC@home message board.
[2025-06-05 08:14:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:14:06] Checking for apptainer binary...
[2025-06-05 08:14:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 08:14:06] Running /usr/bin/apptainer --version
[2025-06-05 08:14:06] apptainer version 1.4.1-1.el9
[2025-06-05 08:14:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:14:07] c-8-38.aglt2.org
[2025-06-05 08:14:07] apptainer works
[2025-06-05 08:14:07] Set ATHENA_PROC_NUMBER=10
[2025-06-05 08:14:07] Set ATHENA_CORE_NUMBER=10
[2025-06-05 08:14:07] Starting ATLAS job with PandaID=6679539238
[2025-06-05 08:14:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:51:49]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:51:49]  is_altstaged=None
[2025-06-05 09:51:49]  is_tar=False
[2025-06-05 09:51:49]  lfn=log.45006595._056445.job.log.tgz.1
[2025-06-05 09:51:49]  mtime=0
[2025-06-05 09:51:49]  protocol_id=None
[2025-06-05 09:51:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 09:51:49]  replicas=None
[2025-06-05 09:51:49]  scope=mc23_13p6TeV
[2025-06-05 09:51:49]  status=None
[2025-06-05 09:51:49]  status_code=0
[2025-06-05 09:51:49]  storage_token=
[2025-06-05 09:51:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679539238/log.45006595._056445.job.log.tgz.1
[2025-06-05 09:51:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/b7/log.45006595._056445.job.log.tgz.1
[2025-06-05 09:51:49]  workdir=None
[2025-06-05 09:51:49] ]
[2025-06-05 09:51:49] 2025-06-05 13:51:16,729 | INFO     | transferring file log.45006595._056445.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679539238/log.45006595._056445.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 09:51:49] 2025-06-05 13:51:16,729 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679539238/log.45006595._056445.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056445.job
[2025-06-05 09:51:49] 2025-06-05 13:51:16,748 | INFO     | adding to output.list: log.45006595._056445.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/b7/log.45006595._056445.job.log.tg
[2025-06-05 09:51:49] 2025-06-05 13:51:16,749 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 09:51:49] 2025-06-05 13:51:16,749 | INFO     | summary of transferred files:
[2025-06-05 09:51:49] 2025-06-05 13:51:16,750 | INFO     |  -- lfn=log.45006595._056445.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 09:51:49] 2025-06-05 13:51:16,750 | INFO     | stage-out finished correctly
[2025-06-05 09:51:49] 2025-06-05 13:51:17,752 | INFO     | monitor loop #408: job 0:6679539238 is in state 'finished'
[2025-06-05 09:51:49] 2025-06-05 13:51:17,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:51:49] 2025-06-05 13:51:18,320 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 09:51:49] 2025-06-05 13:51:19,901 | INFO     | job 6679539238 has state=finished
[2025-06-05 09:51:49] 2025-06-05 13:51:19,902 | INFO     | preparing for final server update for job 6679539238 in state='finished'
[2025-06-05 09:51:49] 2025-06-05 13:51:19,902 | INFO     | this job has now completed (state=finished)
[2025-06-05 09:51:49] 2025-06-05 13:51:19,902 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 09:51:49] 2025-06-05 13:51:19,903 | INFO     | log transfer has been attempted: DONE
[2025-06-05 09:51:49] 2025-06-05 13:51:19,903 | INFO     | job 6679539238 has finished - writing final server update
[2025-06-05 09:51:49] 2025-06-05 13:51:19,903 | INFO     | total number of processed events: 400 (read)
[2025-06-05 09:51:49] 2025-06-05 13:51:19,922 | INFO     | executing command: lscpu
[2025-06-05 09:51:49] 2025-06-05 13:51:19,985 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 09:51:49] 2025-06-05 13:51:20,261 | INFO     | monitor loop #409: job 0:6679539238 is in state 'finished'
[2025-06-05 09:51:49] 2025-06-05 13:51:20,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:51:49] 2025-06-05 13:51:22,765 | INFO     | monitor loop #410: job 0:6679539238 is in state 'finished'
[2025-06-05 09:51:49] 2025-06-05 13:51:22,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:51:49] 2025-06-05 13:51:25,271 | INFO     | monitor loop #411: job 0:6679539238 is in state 'finished'
[2025-06-05 09:51:49] 2025-06-05 13:51:25,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:51:49] 2025-06-05 13:51:26,215 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 09:51:49] 2025-06-05 13:51:26,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679539238/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:51:49] 2025-06-05 13:51:26,217 | INFO     | extracted standard info from prmon json
[2025-06-05 09:51:49] 2025-06-05 13:51:26,217 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:51:49] 2025-06-05 13:51:26,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:51:49] 2025-06-05 13:51:26,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:51:49] 2025-06-05 13:51:26,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:51:49] 2025-06-05 13:51:26,225 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:51:49] 2025-06-05 13:51:26,225 | INFO     | sum of square deviations: 204164564.71264383
[2025-06-05 09:51:49] 2025-06-05 13:51:26,230 | INFO     | sum of deviations: -2362354761.75862
[2025-06-05 09:51:49] 2025-06-05 13:51:26,230 | INFO     | mean x: 1749128680.0574713
[2025-06-05 09:51:49] 2025-06-05 13:51:26,230 | INFO     | mean y: 2376491.5517241377
[2025-06-05 09:51:49] 2025-06-05 13:51:26,231 | INFO     | -- intersect: 20241258160.748844
[2025-06-05 09:51:49] 2025-06-05 13:51:26,231 | INFO     | intersect: 20241258160.748844
[2025-06-05 09:51:49] 2025-06-05 13:51:26,231 | INFO     | chi2: 0.43316599066342476
[2025-06-05 09:51:49] 2025-06-05 13:51:26,231 | INFO     | -- intersect: 20241258160.748844
[2025-06-05 09:51:49] 2025-06-05 13:51:26,231 | INFO     | current memory leak: -11.57 B/s (using 87 data points, chi2=0.43)
[2025-06-05 09:51:49] 2025-06-05 13:51:26,232 | INFO     | ..............................
[2025-06-05 09:51:49] 2025-06-05 13:51:26,232 | INFO     | . Timing measurements:
[2025-06-05 09:51:49] 2025-06-05 13:51:26,232 | INFO     | . get job = 0 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,232 | INFO     | . initial setup = 5 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,232 | INFO     | . payload setup = 22 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,232 | INFO     | . stage-in = 0 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,233 | INFO     | . payload execution = 5732 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,233 | INFO     | . stage-out = 1 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,233 | INFO     | . log creation = 0 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,233 | INFO     | ..............................
[2025-06-05 09:51:49] 2025-06-05 13:51:26,350 | INFO     | 
[2025-06-05 09:51:49] 2025-06-05 13:51:26,351 | INFO     | job summary report
[2025-06-05 09:51:49] 2025-06-05 13:51:26,351 | INFO     | --------------------------------------------------
[2025-06-05 09:51:49] 2025-06-05 13:51:26,351 | INFO     | PanDA job id: 6679539238
[2025-06-05 09:51:49] 2025-06-05 13:51:26,351 | INFO     | task id: 45006595
[2025-06-05 09:51:49] 2025-06-05 13:51:26,351 | INFO     | errors: (none)
[2025-06-05 09:51:49] 2025-06-05 13:51:26,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:51:49] 2025-06-05 13:51:26,351 | INFO     | pilot state: finished 
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | transexitcode: 0
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | exeerrorcode: 0
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | exeerrordiag: 
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | exitcode: 0
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | exitmsg: OK
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | cpuconsumptiontime: 41897 s
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | nevents: 400
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | neventsw: 0
[2025-06-05 09:51:49] 2025-06-05 13:51:26,352 | INFO     | pid: 1771176
[2025-06-05 09:51:49] 2025-06-05 13:51:26,353 | INFO     | pgrp: 1771176
[2025-06-05 09:51:49] 2025-06-05 13:51:26,353 | INFO     | corecount: 10
[2025-06-05 09:51:49] 2025-06-05 13:51:26,353 | INFO     | event service: False
[2025-06-05 09:51:49] 2025-06-05 13:51:26,353 | INFO     | sizes: {0: 2397119, 1: 2397318, 12: 2397318, 13: 2397552, 23: 2397608, 5758: 2424123, 5759: 2424250, 5760: 2433247, 5761: 2433303, 5769: 2433473}
[2025-06-05 09:51:49] 2025-06-05 13:51:26,353 | INFO     | --------------------------------------------------
[2025-06-05 09:51:49] 2025-06-05 13:51:26,353 | INFO     | 
[2025-06-05 09:51:49] 2025-06-05 13:51:26,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 09:51:49] 2025-06-05 13:51:26,394 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,394 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,394 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | job 6679539238 has completed (purged errors)
[2025-06-05 09:51:49] 2025-06-05 13:51:26,396 | INFO     | overall cleanup function is called
[2025-06-05 09:51:49] 2025-06-05 13:51:27,407 | INFO     | --- collectZombieJob: --- 10, [1771176]
[2025-06-05 09:51:49] 2025-06-05 13:51:27,408 | INFO     | zombie collector waiting for pid 1771176
[2025-06-05 09:51:49] 2025-06-05 13:51:27,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:51:49] 2025-06-05 13:51:27,408 | INFO     | collected zombie processes
[2025-06-05 09:51:49] 2025-06-05 13:51:27,408 | INFO     | will attempt to kill all subprocesses of pid=1771176
[2025-06-05 09:51:49] 2025-06-05 13:51:29,274 | INFO     | process IDs to be killed: [1771176] (in reverse order)
[2025-06-05 09:51:49] 2025-06-05 13:51:30,049 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:51:49] 2025-06-05 13:51:30,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:51:49] 2025-06-05 13:51:30,108 | INFO     | did not find any defunct processes belonging to 1771176
[2025-06-05 09:51:49] 2025-06-05 13:51:30,120 | INFO     | did not find any defunct processes belonging to 1771176
[2025-06-05 09:51:49] 2025-06-05 13:51:30,120 | INFO     | ready for new job
[2025-06-05 09:51:49] 2025-06-05 13:51:30,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:51:49] 2025-06-05 13:51:30,123 | INFO     | **************************************
[2025-06-05 09:51:49] 2025-06-05 13:51:30,123 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:51:49] 2025-06-05 13:51:30,123 | INFO     | **************************************
[2025-06-05 09:51:49] 2025-06-05 13:51:30,123 | INFO     | 
[2025-06-05 09:51:49] 2025-06-05 13:51:30,125 | INFO     | architecture information:
[2025-06-05 09:51:49] 2025-06-05 13:51:30,126 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:51:49] 2025-06-05 13:51:30,224 | INFO     | cat /etc/os-release:
[2025-06-05 09:51:49] NAME="CentOS Linux"
[2025-06-05 09:51:49] VERSION="7 (Core)"
[2025-06-05 09:51:49] ID="centos"
[2025-06-05 09:51:49] ID_LIKE="rhel fedora"
[2025-06-05 09:51:49] VERSION_ID="7"
[2025-06-05 09:51:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:51:49] ANSI_COLOR="0;31"
[2025-06-05 09:51:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:51:49] HOME_URL="https://www.centos.org/"
[2025-06-05 09:51:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:51:49] 
[2025-06-05 09:51:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:51:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:51:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:51:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:51:49] 
[2025-06-05 09:51:49] 2025-06-05 13:51:30,224 | INFO     | **************************************
[2025-06-05 09:51:49] 2025-06-05 13:51:30,728 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 09:51:49] 2025-06-05 13:51:31,031 | INFO     | sufficient remaining disk space (96680804352 B)
[2025-06-05 09:51:49] 2025-06-05 13:51:31,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:51:49] 2025-06-05 13:51:31,031 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:51:49] 2025-06-05 13:51:31,032 | INFO     | update_server=False
[2025-06-05 09:51:49] 2025-06-05 13:51:31,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:51:49] 2025-06-05 13:51:31,037 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:51:49] 2025-06-05 13:51:31,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:51:49] 2025-06-05 13:51:31,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:51:49] 2025-06-05 13:51:31,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:51:49] 2025-06-05 13:51:31,328 | INFO     | aborting loop
[2025-06-05 09:51:49] 2025-06-05 13:51:31,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:51:49] 2025-06-05 13:51:31,592 | INFO     | all payload control threads have been joined
[2025-06-05 09:51:49] 2025-06-05 13:51:31,920 | INFO     | all data control threads have been joined
[2025-06-05 09:51:49] 2025-06-05 13:51:32,037 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,131 | INFO     | all job control threads have been joined
[2025-06-05 09:51:49] 2025-06-05 13:51:32,206 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,214 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,333 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:51:49] 2025-06-05 13:51:32,428 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,598 | INFO     | [payload] control thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,604 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,712 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,766 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,899 | INFO     | [job] validate thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:32,926 | INFO     | [data] control thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:33,137 | INFO     | [job] control thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:33,207 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:33,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:51:49] 2025-06-05 13:51:34,419 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:37,482 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:41,886 | INFO     | job.realtimelogging is not enabled
[2025-06-05 09:51:49] 2025-06-05 13:51:42,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:51:49] 2025-06-05 13:51:43,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798666057536)>', '<ExcThread(monitor, started 139797821646592)>']
[2025-06-05 09:51:49] 2025-06-05 13:51:44,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:51:49] 2025-06-05 13:51:44,117 | INFO     | [monitor] control thread has ended
[2025-06-05 09:51:49] 2025-06-05 13:51:48,871 | INFO     | all workflow threads have been joined
[2025-06-05 09:51:49] 2025-06-05 13:51:48,872 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:51:49] 2025-06-05 13:51:48,872 | INFO     | traces error code: 0
[2025-06-05 09:51:49] 2025-06-05 13:51:48,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:51:49] 2025-06-05 13:51:49,365 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:51:49] 2025-06-05 13:51:49,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:51:49] 2025-06-05 13:51:49,388 [wrapper] pilotpid: 1760641
[2025-06-05 09:51:49] 2025-06-05 13:51:49,396 [wrapper] Pilot exit status: 0
[2025-06-05 09:51:49] 2025-06-05 13:51:49,439 [wrapper] pandaids: 6679539238
[2025-06-05 09:51:49] 2025-06-05 13:51:49,526 [wrapper] cleanup supervisor_pilot 2287423 1760642
[2025-06-05 09:51:49] 2025-06-05 13:51:49,531 [wrapper] Test setup, not cleaning
[2025-06-05 09:51:49] 2025-06-05 13:51:49,535 [wrapper] apfmon messages muted
[2025-06-05 09:51:49] 2025-06-05 13:51:49,538 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:51:49] 2025-06-05 13:51:49,541 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:51:49]  *** Error codes and diagnostics ***
[2025-06-05 09:51:49]     "exeErrorCode": 0,
[2025-06-05 09:51:49]     "exeErrorDiag": "",
[2025-06-05 09:51:49]     "pilotErrorCode": 0,
[2025-06-05 09:51:49]     "pilotErrorDiag": "",
[2025-06-05 09:51:49]  *** Listing of results directory ***
[2025-06-05 09:51:49] total 389472
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:08 queuedata.json
[2025-06-05 09:51:49] -rwx------. 1 boincer umatlas     37140 Jun  4 05:08 runpilot2-wrapper.sh
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas       100 Jun  5 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:51:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 08:14 run_atlas
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas       105 Jun  5 08:14 job.xml
[2025-06-05 09:51:49] -rw-r--r--. 2 boincer umatlas 216652308 Jun  5 08:14 EVNT.45006593._000987.pool.root.1
[2025-06-05 09:51:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:14 start_atlas.sh
[2025-06-05 09:51:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 08:14 shared
[2025-06-05 09:51:49] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 08:14 input.tar.gz
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas         0 Jun  5 08:14 boinc_lockfile
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas      2524 Jun  5 08:14 pandaJob.out
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas    982836 Jun  5 08:14 agis_schedconf.cvmfs.json
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas   1598969 Jun  5 08:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:51:49] drwx------. 4 boincer umatlas      4096 Jun  5 08:14 pilot3
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas      6654 Jun  5 09:49 init_data.xml
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas 176535913 Jun  5 09:50 HITS.45006595._056445.pool.root.1
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas       529 Jun  5 09:50 boinc_task_state.xml
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas      1039 Jun  5 09:51 memory_monitor_summary.json
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas    358230 Jun  5 09:51 log.45006595._056445.job.log.tgz.1
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas      7713 Jun  5 09:51 heartbeat.json
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas        95 Jun  5 09:51 pilot_heartbeat.json
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas        27 Jun  5 09:51 wrapper_checkpoint.txt
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 09:51 boinc_mmap_file
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas      4425 Jun  5 09:51 pilotlog.txt
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas    541675 Jun  5 09:51 log.45006595._056445.job.log.1
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas       357 Jun  5 09:51 output.list
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas       620 Jun  5 09:51 runtime_log
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas    921600 Jun  5 09:51 result.tar.gz
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas      8651 Jun  5 09:51 runtime_log.err
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas       651 Jun  5 09:51 iBQKDm8Hzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlwnKDmJDzfNn.diag
[2025-06-05 09:51:49] -rw-r--r--. 1 boincer umatlas     21461 Jun  5 09:51 stderr.txt
[2025-06-05 09:51:49] HITS file was successfully produced:
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas 176535913 Jun  5 09:50 shared/HITS.pool.root.1
[2025-06-05 09:51:49]  *** Contents of shared directory: ***
[2025-06-05 09:51:49] total 385400
[2025-06-05 09:51:49] -rw-r--r--. 2 boincer umatlas 216652308 Jun  5 08:14 ATLAS.root_0
[2025-06-05 09:51:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 08:14 start_atlas.sh
[2025-06-05 09:51:49] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 08:14 input.tar.gz
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas 176535913 Jun  5 09:50 HITS.pool.root.1
[2025-06-05 09:51:49] -rw-------. 1 boincer umatlas    921600 Jun  5 09:51 result.tar.gz
09:51:51 (1757063): run_atlas exited; CPU time 42112.736143
09:51:51 (1757063): called boinc_finish(0)

</stderr_txt>
]]>

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