Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:45:29 (3115327): wrapper (7.7.26015): starting
07:45:29 (3115327): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 07:45:29] Arguments: --nthreads 8
[2025-06-05 07:45:29] Threads: 8
[2025-06-05 07:45:29] Checking for CVMFS
[2025-06-05 07:45:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:45:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:45:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:45:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:45:29] 2.12.6.0 213643 33616 546624 146818 1 517 20581668 40960001 17849 16776704 0 405025591 99.749 257148286 23350 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 07:45:29] CVMFS is ok
[2025-06-05 07:45:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:45:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:45:29] Further information can be found at the LHC@home message board.
[2025-06-05 07:45:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:45:29] Checking for apptainer binary...
[2025-06-05 07:45:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:45:29] Running /usr/bin/apptainer --version
[2025-06-05 07:45:29] apptainer version 1.4.1-1.el9
[2025-06-05 07:45:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:45:29] c7-2-17.aglt2.org
[2025-06-05 07:45:29] apptainer works
[2025-06-05 07:45:29] Set ATHENA_PROC_NUMBER=8
[2025-06-05 07:45:29] Set ATHENA_CORE_NUMBER=8
[2025-06-05 07:45:29] Starting ATLAS job with PandaID=6668532480
[2025-06-05 07:45:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:59:01]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:59:01] 2025-06-05 13:58:44,676 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 09:59:01] 2025-06-05 13:58:45,580 | INFO     | monitor loop #509: job 0:6668532480 is in state 'finished'
[2025-06-05 09:59:01] 2025-06-05 13:58:45,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:59:01] 2025-06-05 13:58:45,725 | INFO     | 7988s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 09:59:01] 2025-06-05 13:58:48,083 | INFO     | monitor loop #510: job 0:6668532480 is in state 'finished'
[2025-06-05 09:59:01] 2025-06-05 13:58:48,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,607 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 09:59:01] 2025-06-05 13:58:48,608 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668532480/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,609 | INFO     | extracted standard info from prmon json
[2025-06-05 09:59:01] 2025-06-05 13:58:48,609 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:59:01] 2025-06-05 13:58:48,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:59:01] 2025-06-05 13:58:48,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:59:01] 2025-06-05 13:58:48,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:59:01] 2025-06-05 13:58:48,611 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:59:01] 2025-06-05 13:58:48,612 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,612 | INFO     | sum of deviations: 10722639657.999998
[2025-06-05 09:59:01] 2025-06-05 13:58:48,612 | INFO     | mean x: 1749127929.0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,612 | INFO     | mean y: 2146019.7786259544
[2025-06-05 09:59:01] 2025-06-05 13:58:48,612 | INFO     | -- intersect: -26904296630.889957
[2025-06-05 09:59:01] 2025-06-05 13:58:48,612 | INFO     | intersect: -26904296630.889957
[2025-06-05 09:59:01] 2025-06-05 13:58:48,613 | INFO     | chi2: 1.3437792815047405
[2025-06-05 09:59:01] 2025-06-05 13:58:48,613 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 09:59:01] 2025-06-05 13:58:48,613 | INFO     | sum of deviations: 9484146623.5
[2025-06-05 09:59:01] 2025-06-05 13:58:48,613 | INFO     | mean x: 1749127776.5
[2025-06-05 09:59:01] 2025-06-05 13:58:48,613 | INFO     | mean y: 2143539.087301587
[2025-06-05 09:59:01] 2025-06-05 13:58:48,614 | INFO     | -- intersect: -26743748852.79027
[2025-06-05 09:59:01] 2025-06-05 13:58:48,614 | INFO     | intersect: -26743748852.79027
[2025-06-05 09:59:01] 2025-06-05 13:58:48,614 | INFO     | chi2: 1.3425690432121504
[2025-06-05 09:59:01] 2025-06-05 13:58:48,614 | INFO     | current chi2=1.3425690432121504 (change=0.09006228249291315 %)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,614 | INFO     | right removable region: 125
[2025-06-05 09:59:01] 2025-06-05 13:58:48,614 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | sum of deviations: -4566566658.5
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | mean x: 1749128081.5
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | mean y: 2175806.3253968256
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | -- intersect: 12880184402.615501
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | intersect: 12880184402.615501
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | chi2: 0.06516179875491866
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | current chi2=0.06516179875491866 (change=95.15085552725954 %)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,615 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,616 | INFO     | sum of deviations: -3961063243.000001
[2025-06-05 09:59:01] 2025-06-05 13:58:48,616 | INFO     | mean x: 1749128234.0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,616 | INFO     | mean y: 2174502.9421487604
[2025-06-05 09:59:01] 2025-06-05 13:58:48,616 | INFO     | -- intersect: 12615469573.93328
[2025-06-05 09:59:01] 2025-06-05 13:58:48,616 | INFO     | intersect: 12615469573.93328
[2025-06-05 09:59:01] 2025-06-05 13:58:48,616 | INFO     | chi2: 0.06485632942300311
[2025-06-05 09:59:01] 2025-06-05 13:58:48,616 | INFO     | current chi2=0.06485632942300311 (change=0.46878591099742356 %)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | left removable region: 20
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | sum of square deviations: 358927660.0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | sum of deviations: -1998878744.0000005
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | mean x: 1749128356.0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | mean y: 2166583.1714285715
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | -- intersect: 9743114080.32466
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | intersect: 9743114080.32466
[2025-06-05 09:59:01] 2025-06-05 13:58:48,617 | INFO     | chi2: 0.0544142334001934
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | -- intersect: 9743114080.32466
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | current memory leak: -5.57 B/s (using 105 data points, chi2=0.05)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | ..............................
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | . Timing measurements:
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | . get job = 0 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | . initial setup = 2 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | . payload setup = 6 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | . stage-in = 0 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | . payload execution = 7959 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,618 | INFO     | . stage-out = 0 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,619 | INFO     | . log creation = 0 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,619 | INFO     | ..............................
[2025-06-05 09:59:01] 2025-06-05 13:58:48,689 | INFO     | 
[2025-06-05 09:59:01] 2025-06-05 13:58:48,689 | INFO     | job summary report
[2025-06-05 09:59:01] 2025-06-05 13:58:48,689 | INFO     | --------------------------------------------------
[2025-06-05 09:59:01] 2025-06-05 13:58:48,689 | INFO     | PanDA job id: 6668532480
[2025-06-05 09:59:01] 2025-06-05 13:58:48,689 | INFO     | task id: 44871837
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | errors: (none)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | pilot state: finished 
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | transexitcode: 0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | exeerrorcode: 0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | exeerrordiag: 
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | exitcode: 0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | exitmsg: OK
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | cpuconsumptiontime: 40592 s
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | nevents: 400
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | neventsw: 0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | pid: 3151287
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | pgrp: 3151287
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | corecount: 8
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | event service: False
[2025-06-05 09:59:01] 2025-06-05 13:58:48,690 | INFO     | sizes: {0: 2396564, 1: 2397420, 5: 2397626, 12: 2397682, 7969: 2425368, 7970: 2434493, 7975: 2434607}
[2025-06-05 09:59:01] 2025-06-05 13:58:48,691 | INFO     | --------------------------------------------------
[2025-06-05 09:59:01] 2025-06-05 13:58:48,691 | INFO     | 
[2025-06-05 09:59:01] 2025-06-05 13:58:48,691 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 09:59:01] 2025-06-05 13:58:48,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,710 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:59:01] 2025-06-05 13:58:48,710 | INFO     | job 6668532480 has completed (purged errors)
[2025-06-05 09:59:01] 2025-06-05 13:58:48,710 | INFO     | overall cleanup function is called
[2025-06-05 09:59:01] 2025-06-05 13:58:49,277 | INFO     | PID=3124187 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 09:59:01] 2025-06-05 13:58:49,277 | INFO     | .. there are 44 such processes running
[2025-06-05 09:59:01] 2025-06-05 13:58:49,718 | INFO     | --- collectZombieJob: --- 10, [3151287]
[2025-06-05 09:59:01] 2025-06-05 13:58:49,718 | INFO     | zombie collector waiting for pid 3151287
[2025-06-05 09:59:01] 2025-06-05 13:58:49,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:59:01] 2025-06-05 13:58:49,718 | INFO     | collected zombie processes
[2025-06-05 09:59:01] 2025-06-05 13:58:49,718 | INFO     | will attempt to kill all subprocesses of pid=3151287
[2025-06-05 09:59:01] 2025-06-05 13:58:50,163 | INFO     | process IDs to be killed: [3151287] (in reverse order)
[2025-06-05 09:59:01] 2025-06-05 13:58:50,314 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:59:01] 2025-06-05 13:58:50,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:59:01] 2025-06-05 13:58:50,337 | INFO     | did not find any defunct processes belonging to 3151287
[2025-06-05 09:59:01] 2025-06-05 13:58:50,358 | INFO     | did not find any defunct processes belonging to 3151287
[2025-06-05 09:59:01] 2025-06-05 13:58:50,359 | INFO     | ready for new job
[2025-06-05 09:59:01] 2025-06-05 13:58:50,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:59:01] 2025-06-05 13:58:50,360 | INFO     | **************************************
[2025-06-05 09:59:01] 2025-06-05 13:58:50,360 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:59:01] 2025-06-05 13:58:50,360 | INFO     | **************************************
[2025-06-05 09:59:01] 2025-06-05 13:58:50,360 | INFO     | 
[2025-06-05 09:59:01] 2025-06-05 13:58:50,365 | INFO     | architecture information:
[2025-06-05 09:59:01] 2025-06-05 13:58:50,365 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:59:01] 2025-06-05 13:58:50,378 | INFO     | cat /etc/os-release:
[2025-06-05 09:59:01] NAME="CentOS Linux"
[2025-06-05 09:59:01] VERSION="7 (Core)"
[2025-06-05 09:59:01] ID="centos"
[2025-06-05 09:59:01] ID_LIKE="rhel fedora"
[2025-06-05 09:59:01] VERSION_ID="7"
[2025-06-05 09:59:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:59:01] ANSI_COLOR="0;31"
[2025-06-05 09:59:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:59:01] HOME_URL="https://www.centos.org/"
[2025-06-05 09:59:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:59:01] 
[2025-06-05 09:59:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:59:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:59:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:59:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:59:01] 
[2025-06-05 09:59:01] 2025-06-05 13:58:50,378 | INFO     | **************************************
[2025-06-05 09:59:01] 2025-06-05 13:58:50,881 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 09:59:01] 2025-06-05 13:58:50,903 | INFO     | sufficient remaining disk space (129219166208 B)
[2025-06-05 09:59:01] 2025-06-05 13:58:50,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:59:01] 2025-06-05 13:58:50,903 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:59:01] 2025-06-05 13:58:50,903 | INFO     | update_server=False
[2025-06-05 09:59:01] 2025-06-05 13:58:50,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:59:01] 2025-06-05 13:58:50,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:59:01] 2025-06-05 13:58:50,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:59:01] 2025-06-05 13:58:51,282 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:59:01] 2025-06-05 13:58:51,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:59:01] 2025-06-05 13:58:51,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:59:01] 2025-06-05 13:58:51,388 | INFO     | all data control threads have been joined
[2025-06-05 09:59:01] 2025-06-05 13:58:51,394 | INFO     | all payload control threads have been joined
[2025-06-05 09:59:01] 2025-06-05 13:58:51,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:59:01] 2025-06-05 13:58:51,592 | INFO     | aborting loop
[2025-06-05 09:59:01] 2025-06-05 13:58:51,909 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,087 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,388 | INFO     | all job control threads have been joined
[2025-06-05 09:59:01] 2025-06-05 13:58:52,393 | INFO     | [data] control thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,399 | INFO     | [payload] control thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,400 | INFO     | [job] validate thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,597 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,671 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,714 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,903 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,909 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:52,927 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:53,019 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:53,076 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:53,393 | INFO     | [job] control thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:53,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:59:01] 2025-06-05 13:58:54,704 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:54,910 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:59:01] 2025-06-05 13:58:56,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117417539392)>', '<ExcThread(monitor, started 140116790077184)>']
[2025-06-05 09:59:01] 2025-06-05 13:58:56,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:59:01] 2025-06-05 13:58:56,307 | INFO     | [monitor] control thread has ended
[2025-06-05 09:59:01] 2025-06-05 13:59:01,089 | INFO     | all workflow threads have been joined
[2025-06-05 09:59:01] 2025-06-05 13:59:01,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:59:01] 2025-06-05 13:59:01,089 | INFO     | traces error code: 0
[2025-06-05 09:59:01] 2025-06-05 13:59:01,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:59:01] 2025-06-05 13:59:01,211 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:59:01] 2025-06-05 13:59:01,215 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:59:01] 2025-06-05 13:59:01,217 [wrapper] pilotpid: 3124187
[2025-06-05 09:59:01] 2025-06-05 13:59:01,220 [wrapper] Pilot exit status: 0
[2025-06-05 09:59:01] 2025-06-05 13:59:01,232 [wrapper] pandaids: 6668532480
[2025-06-05 09:59:01] 2025-06-05 13:59:01,343 [wrapper] cleanup supervisor_pilot  326501 3124188
[2025-06-05 09:59:01] 2025-06-05 13:59:01,347 [wrapper] Test setup, not cleaning
[2025-06-05 09:59:01] 2025-06-05 13:59:01,350 [wrapper] apfmon messages muted
[2025-06-05 09:59:01] 2025-06-05 13:59:01,353 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:59:01] 2025-06-05 13:59:01,355 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:59:01]  *** Error codes and diagnostics ***
[2025-06-05 09:59:01]     "exeErrorCode": 0,
[2025-06-05 09:59:01]     "exeErrorDiag": "",
[2025-06-05 09:59:01]     "pilotErrorCode": 0,
[2025-06-05 09:59:01]     "pilotErrorDiag": "",
[2025-06-05 09:59:01]  *** Listing of results directory ***
[2025-06-05 09:59:01] total 422948
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas    495897 May 28 10:07 pilot3.tar.gz
[2025-06-05 09:59:01] -rwx------. 1 boincer umatlas     37140 May 28 10:36 runpilot2-wrapper.sh
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas      5111 May 28 10:36 queuedata.json
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas       100 Jun  5 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:59:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 07:45 run_atlas
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas       105 Jun  5 07:45 job.xml
[2025-06-05 09:59:01] -rw-r--r--. 2 boincer umatlas 225069202 Jun  5 07:45 EVNT.44871834._003343.pool.root.1
[2025-06-05 09:59:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:45 start_atlas.sh
[2025-06-05 09:59:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 07:45 shared
[2025-06-05 09:59:01] -rw-r--r--. 2 boincer umatlas    508873 Jun  5 07:45 input.tar.gz
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas         0 Jun  5 07:45 boinc_lockfile
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 07:45 pandaJob.out
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas    982836 Jun  5 07:45 agis_schedconf.cvmfs.json
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas   1598969 Jun  5 07:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:59:01] drwx------. 4 boincer umatlas      4096 Jun  5 07:45 pilot3
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas       529 Jun  5 09:58 boinc_task_state.xml
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas 202135042 Jun  5 09:58 HITS.44871837._085725.pool.root.1
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas      6935 Jun  5 09:58 init_data.xml
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas        95 Jun  5 09:58 pilot_heartbeat.json
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas      1046 Jun  5 09:58 memory_monitor_summary.json
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas    335350 Jun  5 09:58 log.44871837._085725.job.log.tgz.1
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas      7704 Jun  5 09:58 heartbeat.json
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas        27 Jun  5 09:58 wrapper_checkpoint.txt
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 09:58 boinc_mmap_file
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas      4354 Jun  5 09:59 pilotlog.txt
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas    698559 Jun  5 09:59 log.44871837._085725.job.log.1
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas       357 Jun  5 09:59 output.list
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas       620 Jun  5 09:59 runtime_log
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas   1054720 Jun  5 09:59 result.tar.gz
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 09:59 runtime_log.err
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas       655 Jun  5 09:59 1lIODmA4We7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8eTKDmqzrC6n.diag
[2025-06-05 09:59:01] -rw-r--r--. 1 boincer umatlas     21255 Jun  5 09:59 stderr.txt
[2025-06-05 09:59:01] HITS file was successfully produced:
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas 202135042 Jun  5 09:58 shared/HITS.pool.root.1
[2025-06-05 09:59:01]  *** Contents of shared directory: ***
[2025-06-05 09:59:01] total 418748
[2025-06-05 09:59:01] -rw-r--r--. 2 boincer umatlas 225069202 Jun  5 07:45 ATLAS.root_0
[2025-06-05 09:59:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:45 start_atlas.sh
[2025-06-05 09:59:01] -rw-r--r--. 2 boincer umatlas    508873 Jun  5 07:45 input.tar.gz
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas 202135042 Jun  5 09:58 HITS.pool.root.1
[2025-06-05 09:59:01] -rw-------. 1 boincer umatlas   1054720 Jun  5 09:59 result.tar.gz
09:59:03 (3115327): run_atlas exited; CPU time 40907.561030
09:59:03 (3115327): called boinc_finish(0)

</stderr_txt>
]]>

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