Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:45:42 (2404711): wrapper (7.7.26015): starting
07:45:42 (2404711): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 07:45:42] Arguments: --nthreads 8
[2025-06-05 07:45:42] Threads: 8
[2025-06-05 07:45:42] Checking for CVMFS
[2025-06-05 07:45:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:45:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:45:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:45:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:45:43] 2.12.6.0 5676 2736 237428 146818 3 83 17839700 32935937 16647 16776704 0 23344293 99.880 9219353 49057 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 07:45:43] CVMFS is ok
[2025-06-05 07:45:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:45:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:45:43] Further information can be found at the LHC@home message board.
[2025-06-05 07:45:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:45:43] Checking for apptainer binary...
[2025-06-05 07:45:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:45:43] Running /usr/bin/apptainer --version
[2025-06-05 07:45:43] apptainer version 1.4.1-1.el9
[2025-06-05 07:45:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:45:43] c7-3-28.aglt2.org
[2025-06-05 07:45:43] apptainer works
[2025-06-05 07:45:43] Set ATHENA_PROC_NUMBER=8
[2025-06-05 07:45:43] Set ATHENA_CORE_NUMBER=8
[2025-06-05 07:45:43] Starting ATLAS job with PandaID=6667923951
[2025-06-05 07:45:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:27:32]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:27:32] 2025-06-05 13:27:17,789 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667923951/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,789 | INFO     | extracted standard info from prmon json
[2025-06-05 09:27:32] 2025-06-05 13:27:17,790 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:27:32] 2025-06-05 13:27:17,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:27:32] 2025-06-05 13:27:17,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:27:32] 2025-06-05 13:27:17,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:27:32] 2025-06-05 13:27:17,791 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:27:32] 2025-06-05 13:27:17,791 | INFO     | sum of square deviations: 310052325.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,791 | INFO     | sum of deviations: -2083734898.4999971
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | mean x: 1749127000.5
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | mean y: 2165330.49
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | -- intersect: 11757332697.322266
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | intersect: 11757332697.322266
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | chi2: 2.021138856183379
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | sum of square deviations: 265828240.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | sum of deviations: 4293427659.999999
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | mean x: 1749126848.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | mean y: 2186543.252631579
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | -- intersect: -28248196448.606373
[2025-06-05 09:27:32] 2025-06-05 13:27:17,792 | INFO     | intersect: -28248196448.606373
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | chi2: 1.3710348650241353
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | current chi2=1.3710348650241353 (change=32.16523145702461 %)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | sum of square deviations: 226022842.5
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | sum of deviations: 4393626778.5
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | mean x: 1749126695.5
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | mean y: 2186930.4555555554
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | -- intersect: -33998845015.41078
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | intersect: -33998845015.41078
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | chi2: 1.373406957688386
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | current chi2=1.373406957688386 (change=-0.1730147587610035 %)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | right removable region: 89
[2025-06-05 09:27:32] 2025-06-05 13:27:17,793 | INFO     | sum of square deviations: 265828240.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | sum of deviations: -13878560302.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | mean x: 1749127153.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | mean y: 2205128.3684210526
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | -- intersect: 91321948541.5441
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | intersect: 91321948541.5441
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | chi2: 0.7445981356959205
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | current chi2=0.7445981356959205 (change=63.15947647941499 %)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | sum of square deviations: 226022842.5
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | sum of deviations: -12388612762.5
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | mean x: 1749127305.5
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | mean y: 2199373.433333333
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | -- intersect: 95874194524.34175
[2025-06-05 09:27:32] 2025-06-05 13:27:17,794 | INFO     | intersect: 95874194524.34175
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | chi2: 0.7443814969102204
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | current chi2=0.7443814969102204 (change=0.029094725774142738 %)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | left removable region: 20
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | sum of square deviations: 101843770.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | sum of deviations: -2789526522.9999995
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | mean x: 1749127275.0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | mean y: 2212389.1304347827
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | -- intersect: 47911249198.30604
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | intersect: 47911249198.30604
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | chi2: 0.05855015060761484
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | -- intersect: 47911249198.30604
[2025-06-05 09:27:32] 2025-06-05 13:27:17,795 | INFO     | current memory leak: -27.39 B/s (using 69 data points, chi2=0.06)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | ..............................
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . Timing measurements:
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . get job = 0 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . initial setup = 2 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . payload setup = 6 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . stage-in = 0 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . payload execution = 6048 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . stage-out = 0 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | . log creation = 0 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,796 | INFO     | ..............................
[2025-06-05 09:27:32] 2025-06-05 13:27:17,840 | INFO     | 
[2025-06-05 09:27:32] 2025-06-05 13:27:17,840 | INFO     | job summary report
[2025-06-05 09:27:32] 2025-06-05 13:27:17,840 | INFO     | --------------------------------------------------
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | PanDA job id: 6667923951
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | task id: 44871837
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | errors: (none)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | pilot state: finished 
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | transexitcode: 0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | exeerrorcode: 0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | exeerrordiag: 
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | exitcode: 0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | exitmsg: OK
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | cpuconsumptiontime: 40749 s
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | nevents: 400
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | neventsw: 0
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | pid: 2426423
[2025-06-05 09:27:32] 2025-06-05 13:27:17,841 | INFO     | pgrp: 2426423
[2025-06-05 09:27:32] 2025-06-05 13:27:17,842 | INFO     | corecount: 8
[2025-06-05 09:27:32] 2025-06-05 13:27:17,842 | INFO     | event service: False
[2025-06-05 09:27:32] 2025-06-05 13:27:17,842 | INFO     | sizes: {0: 2397249, 1: 2397420, 5: 2397626, 11: 2397682, 6058: 2424328, 6059: 2433269, 6062: 2433453, 6068: 2433623}
[2025-06-05 09:27:32] 2025-06-05 13:27:17,842 | INFO     | --------------------------------------------------
[2025-06-05 09:27:32] 2025-06-05 13:27:17,842 | INFO     | 
[2025-06-05 09:27:32] 2025-06-05 13:27:17,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 09:27:32] 2025-06-05 13:27:17,862 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | job 6667923951 has completed (purged errors)
[2025-06-05 09:27:32] 2025-06-05 13:27:17,864 | INFO     | overall cleanup function is called
[2025-06-05 09:27:32] 2025-06-05 13:27:18,871 | INFO     | --- collectZombieJob: --- 10, [2426423]
[2025-06-05 09:27:32] 2025-06-05 13:27:18,872 | INFO     | zombie collector waiting for pid 2426423
[2025-06-05 09:27:32] 2025-06-05 13:27:18,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:27:32] 2025-06-05 13:27:18,872 | INFO     | collected zombie processes
[2025-06-05 09:27:32] 2025-06-05 13:27:18,872 | INFO     | will attempt to kill all subprocesses of pid=2426423
[2025-06-05 09:27:32] 2025-06-05 13:27:19,189 | INFO     | process IDs to be killed: [2426423] (in reverse order)
[2025-06-05 09:27:32] 2025-06-05 13:27:19,302 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:27:32] 2025-06-05 13:27:19,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:27:32] 2025-06-05 13:27:19,317 | INFO     | did not find any defunct processes belonging to 2426423
[2025-06-05 09:27:32] 2025-06-05 13:27:19,332 | INFO     | did not find any defunct processes belonging to 2426423
[2025-06-05 09:27:32] 2025-06-05 13:27:19,332 | INFO     | ready for new job
[2025-06-05 09:27:32] 2025-06-05 13:27:19,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:27:32] 2025-06-05 13:27:19,334 | INFO     | **************************************
[2025-06-05 09:27:32] 2025-06-05 13:27:19,334 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:27:32] 2025-06-05 13:27:19,334 | INFO     | **************************************
[2025-06-05 09:27:32] 2025-06-05 13:27:19,334 | INFO     | 
[2025-06-05 09:27:32] 2025-06-05 13:27:19,353 | INFO     | architecture information:
[2025-06-05 09:27:32] 2025-06-05 13:27:19,354 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:27:32] 2025-06-05 13:27:19,372 | INFO     | cat /etc/os-release:
[2025-06-05 09:27:32] NAME="CentOS Linux"
[2025-06-05 09:27:32] VERSION="7 (Core)"
[2025-06-05 09:27:32] ID="centos"
[2025-06-05 09:27:32] ID_LIKE="rhel fedora"
[2025-06-05 09:27:32] VERSION_ID="7"
[2025-06-05 09:27:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:27:32] ANSI_COLOR="0;31"
[2025-06-05 09:27:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:27:32] HOME_URL="https://www.centos.org/"
[2025-06-05 09:27:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:27:32] 
[2025-06-05 09:27:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:27:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:27:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:27:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:27:32] 
[2025-06-05 09:27:32] 2025-06-05 13:27:19,373 | INFO     | **************************************
[2025-06-05 09:27:32] 2025-06-05 13:27:19,875 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 09:27:32] 2025-06-05 13:27:19,896 | INFO     | sufficient remaining disk space (76619448320 B)
[2025-06-05 09:27:32] 2025-06-05 13:27:19,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:27:32] 2025-06-05 13:27:19,897 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:27:32] 2025-06-05 13:27:19,897 | INFO     | update_server=False
[2025-06-05 09:27:32] 2025-06-05 13:27:19,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:27:32] 2025-06-05 13:27:19,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:27:32] 2025-06-05 13:27:19,898 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 09:27:32] 2025-06-05 13:27:19,898 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:27:32] 2025-06-05 13:27:19,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:27:32] 2025-06-05 13:27:19,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:27:32] 2025-06-05 13:27:20,208 | INFO     | all data control threads have been joined
[2025-06-05 09:27:32] 2025-06-05 13:27:20,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:27:32] 2025-06-05 13:27:20,221 | INFO     | aborting loop
[2025-06-05 09:27:32] 2025-06-05 13:27:20,752 | INFO     | all payload control threads have been joined
[2025-06-05 09:27:32] 2025-06-05 13:27:20,860 | INFO     | all job control threads have been joined
[2025-06-05 09:27:32] 2025-06-05 13:27:20,902 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:20,910 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:20,988 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,213 | INFO     | [data] control thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,226 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,717 | INFO     | [job] validate thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,757 | INFO     | [payload] control thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,865 | INFO     | [job] control thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,903 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:21,920 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:22,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:27:32] 2025-06-05 13:27:22,148 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:22,180 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:22,400 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:22,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:27:32] 2025-06-05 13:27:23,852 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:26,145 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:27:32] 2025-06-05 13:27:27,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824751499072)>', '<ExcThread(monitor, started 139824119928576)>']
[2025-06-05 09:27:32] 2025-06-05 13:27:27,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:27:32] 2025-06-05 13:27:27,935 | INFO     | [monitor] control thread has ended
[2025-06-05 09:27:32] 2025-06-05 13:27:32,217 | INFO     | all workflow threads have been joined
[2025-06-05 09:27:32] 2025-06-05 13:27:32,217 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:27:32] 2025-06-05 13:27:32,217 | INFO     | traces error code: 0
[2025-06-05 09:27:32] 2025-06-05 13:27:32,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:27:32] 2025-06-05 13:27:32,375 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:27:32] 2025-06-05 13:27:32,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:27:32] 2025-06-05 13:27:32,381 [wrapper] pilotpid: 2409309
[2025-06-05 09:27:32] 2025-06-05 13:27:32,384 [wrapper] Pilot exit status: 0
[2025-06-05 09:27:32] 2025-06-05 13:27:32,395 [wrapper] pandaids: 6667923951
[2025-06-05 09:27:32] 2025-06-05 13:27:32,477 [wrapper] cleanup supervisor_pilot 2677157 2409310
[2025-06-05 09:27:32] 2025-06-05 13:27:32,480 [wrapper] Test setup, not cleaning
[2025-06-05 09:27:32] 2025-06-05 13:27:32,484 [wrapper] apfmon messages muted
[2025-06-05 09:27:32] 2025-06-05 13:27:32,486 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:27:32] 2025-06-05 13:27:32,489 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:27:32]  *** Error codes and diagnostics ***
[2025-06-05 09:27:32]     "exeErrorCode": 0,
[2025-06-05 09:27:32]     "exeErrorDiag": "",
[2025-06-05 09:27:32]     "pilotErrorCode": 0,
[2025-06-05 09:27:32]     "pilotErrorDiag": "",
[2025-06-05 09:27:32]  *** Listing of results directory ***
[2025-06-05 09:27:32] total 412932
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas      5111 May 27 23:41 queuedata.json
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-05 09:27:32] -rwx------. 1 boincer umatlas     37140 May 27 23:43 runpilot2-wrapper.sh
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas       100 Jun  5 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:27:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 07:45 run_atlas
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas       105 Jun  5 07:45 job.xml
[2025-06-05 09:27:32] -rw-r--r--. 2 boincer umatlas 223204170 Jun  5 07:45 EVNT.44871834._003054.pool.root.1
[2025-06-05 09:27:32] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 07:45 input.tar.gz
[2025-06-05 09:27:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:45 start_atlas.sh
[2025-06-05 09:27:32] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 07:45 shared
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas         0 Jun  5 07:45 boinc_lockfile
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 07:45 pandaJob.out
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas    982836 Jun  5 07:45 agis_schedconf.cvmfs.json
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas   1598969 Jun  5 07:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:27:32] drwx------. 4 boincer umatlas      4096 Jun  5 07:45 pilot3
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas      6933 Jun  5 09:19 init_data.xml
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas 193985916 Jun  5 09:26 HITS.44871837._078137.pool.root.1
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas       529 Jun  5 09:26 boinc_task_state.xml
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas      1030 Jun  5 09:27 memory_monitor_summary.json
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas        95 Jun  5 09:27 pilot_heartbeat.json
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas    331139 Jun  5 09:27 log.44871837._078137.job.log.tgz.1
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas      7689 Jun  5 09:27 heartbeat.json
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 09:27 boinc_mmap_file
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas        27 Jun  5 09:27 wrapper_checkpoint.txt
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas      4476 Jun  5 09:27 pilotlog.txt
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas    582292 Jun  5 09:27 log.44871837._078137.job.log.1
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas       357 Jun  5 09:27 output.list
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas       620 Jun  5 09:27 runtime_log
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas    931840 Jun  5 09:27 result.tar.gz
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas       651 Jun  5 09:27 y1gNDmssMe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFAbKDmKT8qLm.diag
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 09:27 runtime_log.err
[2025-06-05 09:27:32] -rw-r--r--. 1 boincer umatlas     20843 Jun  5 09:27 stderr.txt
[2025-06-05 09:27:32] HITS file was successfully produced:
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas 193985916 Jun  5 09:26 shared/HITS.pool.root.1
[2025-06-05 09:27:32]  *** Contents of shared directory: ***
[2025-06-05 09:27:32] total 408848
[2025-06-05 09:27:32] -rw-r--r--. 2 boincer umatlas 223204170 Jun  5 07:45 ATLAS.root_0
[2025-06-05 09:27:32] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 07:45 input.tar.gz
[2025-06-05 09:27:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:45 start_atlas.sh
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas 193985916 Jun  5 09:26 HITS.pool.root.1
[2025-06-05 09:27:32] -rw-------. 1 boincer umatlas    931840 Jun  5 09:27 result.tar.gz
09:27:34 (2404711): run_atlas exited; CPU time 40810.762695
09:27:34 (2404711): called boinc_finish(0)

</stderr_txt>
]]>

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