Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:39:30 (3062757): wrapper (7.7.26015): starting
07:39:30 (3062757): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 07:39:30] Arguments: --nthreads 8
[2025-06-05 07:39:30] Threads: 8
[2025-06-05 07:39:30] Checking for CVMFS
[2025-06-05 07:39:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:39:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:39:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:39:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:39:30] 2.12.6.0 1699072 24684 583116 146818 2 209 16485860 32935936 18625 16776704 0 130108675 99.682 101216753 28363 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 07:39:30] CVMFS is ok
[2025-06-05 07:39:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:39:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:39:31] Further information can be found at the LHC@home message board.
[2025-06-05 07:39:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:39:31] Checking for apptainer binary...
[2025-06-05 07:39:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:39:31] Running /usr/bin/apptainer --version
[2025-06-05 07:39:31] apptainer version 1.4.1-1.el9
[2025-06-05 07:39:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:39:31] c6-2-11-3.aglt2.org
[2025-06-05 07:39:31] apptainer works
[2025-06-05 07:39:31] Set ATHENA_PROC_NUMBER=8
[2025-06-05 07:39:31] Set ATHENA_CORE_NUMBER=8
[2025-06-05 07:39:31] Starting ATLAS job with PandaID=6668046628
[2025-06-05 07:39:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:44:28]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:44:28] 2025-06-05 13:44:03,008 | INFO     | total number of processed events: 400 (read)
[2025-06-05 09:44:28] 2025-06-05 13:44:03,014 | INFO     | executing command: lscpu
[2025-06-05 09:44:28] 2025-06-05 13:44:03,088 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 09:44:28] 2025-06-05 13:44:04,985 | WARNING  | process 3072881 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 09:44:28] 2025-06-05 13:44:04,985 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668046628/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:44:28] 2025-06-05 13:44:05,306 | INFO     | number of running child processes to parent process 3072881: 1
[2025-06-05 09:44:28] 2025-06-05 13:44:05,306 | INFO     | maximum number of monitored processes: 6
[2025-06-05 09:44:28] 2025-06-05 13:44:07,657 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 09:44:28] 2025-06-05 13:44:07,658 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668046628/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,659 | INFO     | extracted standard info from prmon json
[2025-06-05 09:44:28] 2025-06-05 13:44:07,659 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:44:28] 2025-06-05 13:44:07,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:44:28] 2025-06-05 13:44:07,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:44:28] 2025-06-05 13:44:07,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:44:28] 2025-06-05 13:44:07,662 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:44:28] 2025-06-05 13:44:07,662 | INFO     | sum of square deviations: 563020088.4918019
[2025-06-05 09:44:28] 2025-06-05 13:44:07,663 | INFO     | sum of deviations: -8303887150.3442745
[2025-06-05 09:44:28] 2025-06-05 13:44:07,663 | INFO     | mean x: 1749127301.5081968
[2025-06-05 09:44:28] 2025-06-05 13:44:07,663 | INFO     | mean y: 2237414.344262295
[2025-06-05 09:44:28] 2025-06-05 13:44:07,663 | INFO     | -- intersect: 25799817323.469944
[2025-06-05 09:44:28] 2025-06-05 13:44:07,663 | INFO     | intersect: 25799817323.469944
[2025-06-05 09:44:28] 2025-06-05 13:44:07,663 | INFO     | chi2: 2.0120533517546337
[2025-06-05 09:44:28] 2025-06-05 13:44:07,663 | INFO     | sum of square deviations: 496591240.99145323
[2025-06-05 09:44:28] 2025-06-05 13:44:07,664 | INFO     | sum of deviations: -7748607823.034199
[2025-06-05 09:44:28] 2025-06-05 13:44:07,664 | INFO     | mean x: 1749127149.008547
[2025-06-05 09:44:28] 2025-06-05 13:44:07,664 | INFO     | mean y: 2238647.034188034
[2025-06-05 09:44:28] 2025-06-05 13:44:07,664 | INFO     | -- intersect: 27294907529.45291
[2025-06-05 09:44:28] 2025-06-05 13:44:07,664 | INFO     | intersect: 27294907529.45291
[2025-06-05 09:44:28] 2025-06-05 13:44:07,665 | INFO     | chi2: 2.0061703160477333
[2025-06-05 09:44:28] 2025-06-05 13:44:07,665 | INFO     | current chi2=2.0061703160477333 (change=0.292389647708399 %)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,665 | INFO     | right removable region: 116
[2025-06-05 09:44:28] 2025-06-05 13:44:07,665 | INFO     | sum of square deviations: 496590630.99145323
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | sum of deviations: -25404733658.367527
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | mean x: 1749127454.008547
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | mean y: 2276029.3675213675
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | -- intersect: 89484667219.28592
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | intersect: 89484667219.28592
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | chi2: 0.44580130188876704
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | current chi2=0.44580130188876704 (change=77.84346515960917 %)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,666 | INFO     | sum of square deviations: 435610028.0
[2025-06-05 09:44:28] 2025-06-05 13:44:07,667 | INFO     | sum of deviations: -24027332760.999996
[2025-06-05 09:44:28] 2025-06-05 13:44:07,667 | INFO     | mean x: 1749127606.5
[2025-06-05 09:44:28] 2025-06-05 13:44:07,667 | INFO     | mean y: 2272399.9285714286
[2025-06-05 09:44:28] 2025-06-05 13:44:07,667 | INFO     | -- intersect: 96480471572.2097
[2025-06-05 09:44:28] 2025-06-05 13:44:07,667 | INFO     | intersect: 96480471572.2097
[2025-06-05 09:44:28] 2025-06-05 13:44:07,667 | INFO     | chi2: 0.4001103247659761
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | current chi2=0.4001103247659761 (change=10.249179831733967 %)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | left removable region: 20
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | sum of deviations: -12735565756.499994
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | mean x: 1749127728.5
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | mean y: 2243389.3229166665
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | -- intersect: 81209487177.2723
[2025-06-05 09:44:28] 2025-06-05 13:44:07,668 | INFO     | intersect: 81209487177.2723
[2025-06-05 09:44:28] 2025-06-05 13:44:07,669 | INFO     | chi2: 0.3365082359268759
[2025-06-05 09:44:28] 2025-06-05 13:44:07,669 | INFO     | -- intersect: 81209487177.2723
[2025-06-05 09:44:28] 2025-06-05 13:44:07,669 | INFO     | current memory leak: -46.43 B/s (using 96 data points, chi2=0.34)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,669 | INFO     | ..............................
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . Timing measurements:
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . get job = 0 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . initial setup = 2 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . payload setup = 7 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . stage-in = 0 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . payload execution = 7430 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . stage-out = 0 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | . log creation = 0 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,670 | INFO     | ..............................
[2025-06-05 09:44:28] 2025-06-05 13:44:07,766 | INFO     | 
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | job summary report
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | --------------------------------------------------
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | PanDA job id: 6668046628
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | task id: 44871837
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | errors: (none)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | pilot state: finished 
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | transexitcode: 0
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | exeerrorcode: 0
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | exeerrordiag: 
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | exitcode: 0
[2025-06-05 09:44:28] 2025-06-05 13:44:07,767 | INFO     | exitmsg: OK
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | cpuconsumptiontime: 51928 s
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | nevents: 400
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | neventsw: 0
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | pid: 3072881
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | pgrp: 3072881
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | corecount: 8
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | event service: False
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | sizes: {0: 2397392, 1: 2397392, 5: 2397626, 11: 2397682, 7442: 2425050, 7444: 2433991, 7445: 2434175, 7450: 2434345}
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | --------------------------------------------------
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | 
[2025-06-05 09:44:28] 2025-06-05 13:44:07,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 09:44:28] 2025-06-05 13:44:07,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:44:28] 2025-06-05 13:44:07,790 | INFO     | job 6668046628 has completed (purged errors)
[2025-06-05 09:44:28] 2025-06-05 13:44:07,790 | INFO     | overall cleanup function is called
[2025-06-05 09:44:28] 2025-06-05 13:44:08,798 | INFO     | --- collectZombieJob: --- 10, [3072881]
[2025-06-05 09:44:28] 2025-06-05 13:44:08,798 | INFO     | zombie collector waiting for pid 3072881
[2025-06-05 09:44:28] 2025-06-05 13:44:08,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:44:28] 2025-06-05 13:44:08,799 | INFO     | collected zombie processes
[2025-06-05 09:44:28] 2025-06-05 13:44:08,799 | INFO     | will attempt to kill all subprocesses of pid=3072881
[2025-06-05 09:44:28] 2025-06-05 13:44:09,092 | INFO     | process IDs to be killed: [3072881] (in reverse order)
[2025-06-05 09:44:28] 2025-06-05 13:44:09,192 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:44:28] 2025-06-05 13:44:09,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:44:28] 2025-06-05 13:44:09,205 | INFO     | did not find any defunct processes belonging to 3072881
[2025-06-05 09:44:28] 2025-06-05 13:44:09,219 | INFO     | did not find any defunct processes belonging to 3072881
[2025-06-05 09:44:28] 2025-06-05 13:44:09,219 | INFO     | ready for new job
[2025-06-05 09:44:28] 2025-06-05 13:44:09,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:44:28] 2025-06-05 13:44:09,221 | INFO     | **************************************
[2025-06-05 09:44:28] 2025-06-05 13:44:09,221 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:44:28] 2025-06-05 13:44:09,221 | INFO     | **************************************
[2025-06-05 09:44:28] 2025-06-05 13:44:09,221 | INFO     | 
[2025-06-05 09:44:28] 2025-06-05 13:44:09,240 | INFO     | architecture information:
[2025-06-05 09:44:28] 2025-06-05 13:44:09,240 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:44:28] 2025-06-05 13:44:09,262 | INFO     | cat /etc/os-release:
[2025-06-05 09:44:28] NAME="CentOS Linux"
[2025-06-05 09:44:28] VERSION="7 (Core)"
[2025-06-05 09:44:28] ID="centos"
[2025-06-05 09:44:28] ID_LIKE="rhel fedora"
[2025-06-05 09:44:28] VERSION_ID="7"
[2025-06-05 09:44:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:44:28] ANSI_COLOR="0;31"
[2025-06-05 09:44:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:44:28] HOME_URL="https://www.centos.org/"
[2025-06-05 09:44:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:44:28] 
[2025-06-05 09:44:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:44:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:44:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:44:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:44:28] 
[2025-06-05 09:44:28] 2025-06-05 13:44:09,265 | INFO     | **************************************
[2025-06-05 09:44:28] 2025-06-05 13:44:09,768 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 09:44:28] 2025-06-05 13:44:09,787 | INFO     | sufficient remaining disk space (76617351168 B)
[2025-06-05 09:44:28] 2025-06-05 13:44:09,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:44:28] 2025-06-05 13:44:09,787 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:44:28] 2025-06-05 13:44:09,788 | INFO     | update_server=False
[2025-06-05 09:44:28] 2025-06-05 13:44:09,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:44:28] 2025-06-05 13:44:09,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:44:28] 2025-06-05 13:44:09,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:44:28] 2025-06-05 13:44:09,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:44:28] 2025-06-05 13:44:09,788 | INFO     | aborting loop
[2025-06-05 09:44:28] 2025-06-05 13:44:09,884 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:44:28] 2025-06-05 13:44:09,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:44:28] 2025-06-05 13:44:09,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:44:28] 2025-06-05 13:44:10,221 | INFO     | all data control threads have been joined
[2025-06-05 09:44:28] 2025-06-05 13:44:10,453 | INFO     | all job control threads have been joined
[2025-06-05 09:44:28] 2025-06-05 13:44:10,687 | INFO     | all payload control threads have been joined
[2025-06-05 09:44:28] 2025-06-05 13:44:10,792 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:10,793 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:10,976 | INFO     | [job] validate thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,068 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,192 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,226 | INFO     | [data] control thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,458 | INFO     | [job] control thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,692 | INFO     | [payload] control thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,789 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,899 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:11,963 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:12,037 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:12,087 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:12,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:44:28] 2025-06-05 13:44:13,786 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:13,794 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:20,134 | INFO     | job.realtimelogging is not enabled
[2025-06-05 09:44:28] 2025-06-05 13:44:21,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:44:28] 2025-06-05 13:44:22,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671411930944)>', '<ExcThread(monitor, started 139670784567040)>']
[2025-06-05 09:44:28] 2025-06-05 13:44:22,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:44:28] 2025-06-05 13:44:22,954 | INFO     | [monitor] control thread has ended
[2025-06-05 09:44:28] 2025-06-05 13:44:27,915 | INFO     | all workflow threads have been joined
[2025-06-05 09:44:28] 2025-06-05 13:44:27,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:44:28] 2025-06-05 13:44:27,916 | INFO     | traces error code: 0
[2025-06-05 09:44:28] 2025-06-05 13:44:27,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:44:28] 2025-06-05 13:44:28,087 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:44:28] 2025-06-05 13:44:28,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:44:28] 2025-06-05 13:44:28,092 [wrapper] pilotpid: 3066354
[2025-06-05 09:44:28] 2025-06-05 13:44:28,095 [wrapper] Pilot exit status: 0
[2025-06-05 09:44:28] 2025-06-05 13:44:28,106 [wrapper] pandaids: 6668046628
[2025-06-05 09:44:28] 2025-06-05 13:44:28,179 [wrapper] cleanup supervisor_pilot 3394848 3066355
[2025-06-05 09:44:28] 2025-06-05 13:44:28,182 [wrapper] Test setup, not cleaning
[2025-06-05 09:44:28] 2025-06-05 13:44:28,185 [wrapper] apfmon messages muted
[2025-06-05 09:44:28] 2025-06-05 13:44:28,188 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:44:28] 2025-06-05 13:44:28,192 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:44:28]  *** Error codes and diagnostics ***
[2025-06-05 09:44:28]     "exeErrorCode": 0,
[2025-06-05 09:44:28]     "exeErrorDiag": "",
[2025-06-05 09:44:28]     "pilotErrorCode": 0,
[2025-06-05 09:44:28]     "pilotErrorDiag": "",
[2025-06-05 09:44:28]  *** Listing of results directory ***
[2025-06-05 09:44:28] total 412856
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas      5111 May 28 01:25 queuedata.json
[2025-06-05 09:44:28] -rwx------. 1 boincer umatlas     37140 May 28 01:26 runpilot2-wrapper.sh
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas       100 Jun  5 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:44:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 07:39 run_atlas
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas       105 Jun  5 07:39 job.xml
[2025-06-05 09:44:28] -rw-r--r--. 2 boincer umatlas 223965397 Jun  5 07:39 EVNT.44871834._003094.pool.root.1
[2025-06-05 09:44:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:39 start_atlas.sh
[2025-06-05 09:44:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 07:39 shared
[2025-06-05 09:44:28] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 07:39 input.tar.gz
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas         0 Jun  5 07:39 boinc_lockfile
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 07:39 pandaJob.out
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas    982836 Jun  5 07:39 agis_schedconf.cvmfs.json
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas   1598969 Jun  5 07:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:44:28] drwx------. 4 boincer umatlas      4096 Jun  5 07:39 pilot3
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas      6855 Jun  5 09:37 init_data.xml
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas 192934053 Jun  5 09:43 HITS.44871837._079154.pool.root.1
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas       530 Jun  5 09:43 boinc_task_state.xml
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas      1045 Jun  5 09:43 memory_monitor_summary.json
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas        95 Jun  5 09:43 pilot_heartbeat.json
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas    324164 Jun  5 09:44 log.44871837._079154.job.log.tgz.1
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas      7727 Jun  5 09:44 heartbeat.json
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas        27 Jun  5 09:44 wrapper_checkpoint.txt
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 09:44 boinc_mmap_file
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas      4425 Jun  5 09:44 pilotlog.txt
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas    693960 Jun  5 09:44 log.44871837._079154.job.log.1
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas       357 Jun  5 09:44 output.list
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas       620 Jun  5 09:44 runtime_log
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas   1034240 Jun  5 09:44 result.tar.gz
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas       654 Jun  5 09:44 xkdKDmZUOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkKbKDmw1HYGn.diag
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 09:44 runtime_log.err
[2025-06-05 09:44:28] -rw-r--r--. 1 boincer umatlas     21138 Jun  5 09:44 stderr.txt
[2025-06-05 09:44:28] HITS file was successfully produced:
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas 192934053 Jun  5 09:43 shared/HITS.pool.root.1
[2025-06-05 09:44:28]  *** Contents of shared directory: ***
[2025-06-05 09:44:28] total 408668
[2025-06-05 09:44:28] -rw-r--r--. 2 boincer umatlas 223965397 Jun  5 07:39 ATLAS.root_0
[2025-06-05 09:44:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:39 start_atlas.sh
[2025-06-05 09:44:28] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 07:39 input.tar.gz
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas 192934053 Jun  5 09:43 HITS.pool.root.1
[2025-06-05 09:44:28] -rw-------. 1 boincer umatlas   1034240 Jun  5 09:44 result.tar.gz
09:44:30 (3062757): run_atlas exited; CPU time 52159.463878
09:44:30 (3062757): called boinc_finish(0)

</stderr_txt>
]]>

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