Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:37:29 (14298): wrapper (7.7.26015): starting
07:37:29 (14298): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 07:37:29] Arguments: --nthreads 12
[2025-06-05 07:37:29] Threads: 12
[2025-06-05 07:37:29] Checking for CVMFS
[2025-06-05 07:37:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:37:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:37:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:37:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:37:29] 2.11.2.0 2913 37071 88416 146818 2 1 19734283 20275201 1 130560 0 16880310 99.983 6728373 8042 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 07:37:29] CVMFS is ok
[2025-06-05 07:37:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:37:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:37:29] Further information can be found at the LHC@home message board.
[2025-06-05 07:37:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:37:29] Checking for apptainer binary...
[2025-06-05 07:37:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:37:29] Running /usr/bin/apptainer --version
[2025-06-05 07:37:29] apptainer version 1.3.2-1.el7
[2025-06-05 07:37:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:37:31] c-205-6.aglt2.org
[2025-06-05 07:37:31] apptainer works
[2025-06-05 07:37:31] Set ATHENA_PROC_NUMBER=12
[2025-06-05 07:37:31] Set ATHENA_CORE_NUMBER=12
[2025-06-05 07:37:31] Starting ATLAS job with PandaID=6669622561
[2025-06-05 07:37:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:11:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:11:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 09:11:02]  is_altstaged=None
[2025-06-05 09:11:02]  is_tar=False
[2025-06-05 09:11:02]  lfn=log.44871837._097578.job.log.tgz.1
[2025-06-05 09:11:02]  mtime=0
[2025-06-05 09:11:02]  protocol_id=None
[2025-06-05 09:11:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 09:11:02]  replicas=None
[2025-06-05 09:11:02]  scope=mc23_13p6TeV
[2025-06-05 09:11:02]  status=None
[2025-06-05 09:11:02]  status_code=0
[2025-06-05 09:11:02]  storage_token=
[2025-06-05 09:11:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669622561/log.44871837._097578.job.log.tgz.1
[2025-06-05 09:11:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/04/log.44871837._097578.job.log.tgz.1
[2025-06-05 09:11:02]  workdir=None
[2025-06-05 09:11:02] ]
[2025-06-05 09:11:02] 2025-06-05 13:10:36,641 | INFO     | transferring file log.44871837._097578.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669622561/log.44871837._097578.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 09:11:02] 2025-06-05 13:10:36,641 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669622561/log.44871837._097578.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._097578.job
[2025-06-05 09:11:02] 2025-06-05 13:10:36,663 | INFO     | adding to output.list: log.44871837._097578.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/04/log.44871837._097578.job.log.tg
[2025-06-05 09:11:02] 2025-06-05 13:10:36,664 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 09:11:02] 2025-06-05 13:10:36,664 | INFO     | summary of transferred files:
[2025-06-05 09:11:02] 2025-06-05 13:10:36,664 | INFO     |  -- lfn=log.44871837._097578.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 09:11:02] 2025-06-05 13:10:36,664 | INFO     | stage-out finished correctly
[2025-06-05 09:11:02] 2025-06-05 13:10:36,901 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 09:11:02] 2025-06-05 13:10:36,956 | INFO     | monitor loop #416: job 0:6669622561 is in state 'finished'
[2025-06-05 09:11:02] 2025-06-05 13:10:36,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:11:02] 2025-06-05 13:10:37,097 | INFO     | PID=17900 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 09:11:02] 2025-06-05 13:10:38,002 | INFO     | job 6669622561 has state=finished
[2025-06-05 09:11:02] 2025-06-05 13:10:38,002 | INFO     | preparing for final server update for job 6669622561 in state='finished'
[2025-06-05 09:11:02] 2025-06-05 13:10:38,003 | INFO     | this job has now completed (state=finished)
[2025-06-05 09:11:02] 2025-06-05 13:10:38,003 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 09:11:02] 2025-06-05 13:10:38,003 | INFO     | log transfer has been attempted: DONE
[2025-06-05 09:11:02] 2025-06-05 13:10:38,003 | INFO     | job 6669622561 has finished - writing final server update
[2025-06-05 09:11:02] 2025-06-05 13:10:38,004 | INFO     | total number of processed events: 400 (read)
[2025-06-05 09:11:02] 2025-06-05 13:10:38,005 | INFO     | executing command: lscpu
[2025-06-05 09:11:02] 2025-06-05 13:10:38,032 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 09:11:02] 2025-06-05 13:10:39,469 | INFO     | monitor loop #417: job 0:6669622561 is in state 'finished'
[2025-06-05 09:11:02] 2025-06-05 13:10:39,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:11:02] 2025-06-05 13:10:41,972 | INFO     | monitor loop #418: job 0:6669622561 is in state 'finished'
[2025-06-05 09:11:02] 2025-06-05 13:10:41,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:11:02] 2025-06-05 13:10:42,584 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 09:11:02] 2025-06-05 13:10:42,585 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669622561/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:11:02] 2025-06-05 13:10:42,586 | INFO     | extracted standard info from prmon json
[2025-06-05 09:11:02] 2025-06-05 13:10:42,586 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:11:02] 2025-06-05 13:10:42,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:11:02] 2025-06-05 13:10:42,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:11:02] 2025-06-05 13:10:42,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:11:02] 2025-06-05 13:10:42,589 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:11:02] 2025-06-05 13:10:42,589 | INFO     | sum of square deviations: 183761585.0
[2025-06-05 09:11:02] 2025-06-05 13:10:42,590 | INFO     | sum of deviations: -11873177006.0
[2025-06-05 09:11:02] 2025-06-05 13:10:42,590 | INFO     | mean x: 1749126331.5
[2025-06-05 09:11:02] 2025-06-05 13:10:42,590 | INFO     | mean y: 2791104.285714286
[2025-06-05 09:11:02] 2025-06-05 13:10:42,590 | INFO     | -- intersect: 113017089167.47958
[2025-06-05 09:11:02] 2025-06-05 13:10:42,590 | INFO     | intersect: 113017089167.47958
[2025-06-05 09:11:02] 2025-06-05 13:10:42,590 | INFO     | chi2: 0.10187285635588088
[2025-06-05 09:11:02] 2025-06-05 13:10:42,591 | INFO     | -- intersect: 113017089167.47958
[2025-06-05 09:11:02] 2025-06-05 13:10:42,591 | INFO     | current memory leak: -64.61 B/s (using 84 data points, chi2=0.10)
[2025-06-05 09:11:02] 2025-06-05 13:10:42,591 | INFO     | ..............................
[2025-06-05 09:11:02] 2025-06-05 13:10:42,591 | INFO     | . Timing measurements:
[2025-06-05 09:11:02] 2025-06-05 13:10:42,591 | INFO     | . get job = 0 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,591 | INFO     | . initial setup = 2 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,591 | INFO     | . payload setup = 9 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,592 | INFO     | . stage-in = 0 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,592 | INFO     | . payload execution = 5542 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,592 | INFO     | . stage-out = 0 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,592 | INFO     | . log creation = 0 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,592 | INFO     | ..............................
[2025-06-05 09:11:02] 2025-06-05 13:10:42,896 | INFO     | 
[2025-06-05 09:11:02] 2025-06-05 13:10:42,896 | INFO     | job summary report
[2025-06-05 09:11:02] 2025-06-05 13:10:42,896 | INFO     | --------------------------------------------------
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | PanDA job id: 6669622561
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | task id: 44871837
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | errors: (none)
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | pilot state: finished 
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | transexitcode: 0
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | exeerrorcode: 0
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | exeerrordiag: 
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | exitcode: 0
[2025-06-05 09:11:02] 2025-06-05 13:10:42,897 | INFO     | exitmsg: OK
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | cpuconsumptiontime: 60292 s
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | nevents: 400
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | neventsw: 0
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | pid: 24356
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | pgrp: 24356
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | corecount: 12
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | event service: False
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | sizes: {0: 2397390, 5: 2397596, 11: 2397652, 5555: 2424094, 5556: 2433091, 5562: 2433205}
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | --------------------------------------------------
[2025-06-05 09:11:02] 2025-06-05 13:10:42,898 | INFO     | 
[2025-06-05 09:11:02] 2025-06-05 13:10:42,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 09:11:02] 2025-06-05 13:10:42,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:11:02] 2025-06-05 13:10:42,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:11:02] 2025-06-05 13:10:42,925 | INFO     | job 6669622561 has completed (purged errors)
[2025-06-05 09:11:02] 2025-06-05 13:10:42,925 | INFO     | overall cleanup function is called
[2025-06-05 09:11:02] 2025-06-05 13:10:43,933 | INFO     | --- collectZombieJob: --- 10, [24356]
[2025-06-05 09:11:02] 2025-06-05 13:10:43,933 | INFO     | zombie collector waiting for pid 24356
[2025-06-05 09:11:02] 2025-06-05 13:10:43,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:11:02] 2025-06-05 13:10:43,934 | INFO     | collected zombie processes
[2025-06-05 09:11:02] 2025-06-05 13:10:43,934 | INFO     | will attempt to kill all subprocesses of pid=24356
[2025-06-05 09:11:02] 2025-06-05 13:10:44,025 | INFO     | process IDs to be killed: [24356] (in reverse order)
[2025-06-05 09:11:02] 2025-06-05 13:10:44,078 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:11:02] 2025-06-05 13:10:44,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:11:02] 2025-06-05 13:10:44,082 | INFO     | did not find any defunct processes belonging to 24356
[2025-06-05 09:11:02] 2025-06-05 13:10:44,086 | INFO     | did not find any defunct processes belonging to 24356
[2025-06-05 09:11:02] 2025-06-05 13:10:44,086 | INFO     | ready for new job
[2025-06-05 09:11:02] 2025-06-05 13:10:44,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:11:02] 2025-06-05 13:10:44,088 | INFO     | **************************************
[2025-06-05 09:11:02] 2025-06-05 13:10:44,088 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:11:02] 2025-06-05 13:10:44,088 | INFO     | **************************************
[2025-06-05 09:11:02] 2025-06-05 13:10:44,088 | INFO     | 
[2025-06-05 09:11:02] 2025-06-05 13:10:44,089 | INFO     | architecture information:
[2025-06-05 09:11:02] 2025-06-05 13:10:44,089 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:11:02] 2025-06-05 13:10:44,102 | INFO     | cat /etc/os-release:
[2025-06-05 09:11:02] NAME="CentOS Linux"
[2025-06-05 09:11:02] VERSION="7 (Core)"
[2025-06-05 09:11:02] ID="centos"
[2025-06-05 09:11:02] ID_LIKE="rhel fedora"
[2025-06-05 09:11:02] VERSION_ID="7"
[2025-06-05 09:11:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:11:02] ANSI_COLOR="0;31"
[2025-06-05 09:11:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:11:02] HOME_URL="https://www.centos.org/"
[2025-06-05 09:11:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:11:02] 
[2025-06-05 09:11:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:11:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:11:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:11:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:11:02] 
[2025-06-05 09:11:02] 2025-06-05 13:10:44,103 | INFO     | **************************************
[2025-06-05 09:11:02] 2025-06-05 13:10:44,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 09:11:02] 2025-06-05 13:10:44,621 | INFO     | sufficient remaining disk space (29381099520 B)
[2025-06-05 09:11:02] 2025-06-05 13:10:44,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:11:02] 2025-06-05 13:10:44,622 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:11:02] 2025-06-05 13:10:44,622 | INFO     | update_server=False
[2025-06-05 09:11:02] 2025-06-05 13:10:44,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:11:02] 2025-06-05 13:10:44,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:11:02] 2025-06-05 13:10:44,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:11:02] 2025-06-05 13:10:45,113 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:11:02] 2025-06-05 13:10:45,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:11:02] 2025-06-05 13:10:45,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:11:02] 2025-06-05 13:10:45,384 | INFO     | all payload control threads have been joined
[2025-06-05 09:11:02] 2025-06-05 13:10:45,410 | INFO     | all data control threads have been joined
[2025-06-05 09:11:02] 2025-06-05 13:10:45,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:11:02] 2025-06-05 13:10:45,480 | INFO     | aborting loop
[2025-06-05 09:11:02] 2025-06-05 13:10:45,628 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:45,628 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:45,666 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:45,820 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:45,839 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,004 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,041 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,047 | INFO     | all job control threads have been joined
[2025-06-05 09:11:02] 2025-06-05 13:10:46,390 | INFO     | [payload] control thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,415 | INFO     | [data] control thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,486 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,535 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,765 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:46,826 | INFO     | [job] validate thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:47,052 | INFO     | [job] control thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:47,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:11:02] 2025-06-05 13:10:51,499 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:55,540 | INFO     | job.realtimelogging is not enabled
[2025-06-05 09:11:02] 2025-06-05 13:10:56,546 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:11:02] 2025-06-05 13:10:57,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666317522752)>', '<ExcThread(monitor, started 140665077888768)>']
[2025-06-05 09:11:02] 2025-06-05 13:10:57,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:11:02] 2025-06-05 13:10:57,176 | INFO     | [monitor] control thread has ended
[2025-06-05 09:11:02] 2025-06-05 13:11:02,127 | INFO     | all workflow threads have been joined
[2025-06-05 09:11:02] 2025-06-05 13:11:02,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:11:02] 2025-06-05 13:11:02,128 | INFO     | traces error code: 0
[2025-06-05 09:11:02] 2025-06-05 13:11:02,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:11:02] 2025-06-05 13:11:02,217 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:11:02] 2025-06-05 13:11:02,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:11:02] 2025-06-05 13:11:02,225 [wrapper] pilotpid: 17900
[2025-06-05 09:11:02] 2025-06-05 13:11:02,228 [wrapper] Pilot exit status: 0
[2025-06-05 09:11:02] 2025-06-05 13:11:02,245 [wrapper] pandaids: 6669622561
[2025-06-05 09:11:02] 2025-06-05 13:11:02,285 [wrapper] cleanup supervisor_pilot 20555 17901
[2025-06-05 09:11:02] 2025-06-05 13:11:02,289 [wrapper] Test setup, not cleaning
[2025-06-05 09:11:02] 2025-06-05 13:11:02,293 [wrapper] apfmon messages muted
[2025-06-05 09:11:02] 2025-06-05 13:11:02,297 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:11:02] 2025-06-05 13:11:02,302 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:11:02]  *** Error codes and diagnostics ***
[2025-06-05 09:11:02]     "exeErrorCode": 0,
[2025-06-05 09:11:02]     "exeErrorDiag": "",
[2025-06-05 09:11:02]     "pilotErrorCode": 0,
[2025-06-05 09:11:02]     "pilotErrorDiag": "",
[2025-06-05 09:11:02]  *** Listing of results directory ***
[2025-06-05 09:11:02] total 418564
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas    495897 May 29 04:32 pilot3.tar.gz
[2025-06-05 09:11:02] -rwx------ 1 boincer umatlas     37140 May 29 04:35 runpilot2-wrapper.sh
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas      5111 May 29 04:35 queuedata.json
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas       100 Jun  5 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:11:02] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 07:37 run_atlas
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas       105 Jun  5 07:37 job.xml
[2025-06-05 09:11:02] -rw-r--r-- 2 boincer umatlas 224158023 Jun  5 07:37 EVNT.44871834._003841.pool.root.1
[2025-06-05 09:11:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 07:37 start_atlas.sh
[2025-06-05 09:11:02] drwxrwx--x 2 boincer umatlas      4096 Jun  5 07:37 shared
[2025-06-05 09:11:02] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 07:37 input.tar.gz
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas         0 Jun  5 07:37 boinc_lockfile
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 07:37 pandaJob.out
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas    982836 Jun  5 07:37 agis_schedconf.cvmfs.json
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas   1598969 Jun  5 07:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:11:02] drwx------ 4 boincer umatlas      4096 Jun  5 07:37 pilot3
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas      5867 Jun  5 09:09 init_data.xml
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas        95 Jun  5 09:09 pilot_heartbeat.json
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas 198853239 Jun  5 09:10 HITS.44871837._097578.pool.root.1
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas      1058 Jun  5 09:10 memory_monitor_summary.json
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas       529 Jun  5 09:10 boinc_task_state.xml
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas    360017 Jun  5 09:10 log.44871837._097578.job.log.tgz.1
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas      7750 Jun  5 09:10 heartbeat.json
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 09:10 boinc_mmap_file
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas        27 Jun  5 09:10 wrapper_checkpoint.txt
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas      4425 Jun  5 09:11 pilotlog.txt
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas    524742 Jun  5 09:11 log.44871837._097578.job.log.1
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas       357 Jun  5 09:11 output.list
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas       620 Jun  5 09:11 runtime_log
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas    901120 Jun  5 09:11 result.tar.gz
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas      8656 Jun  5 09:11 runtime_log.err
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas       658 Jun  5 09:11 Aw7LDmXune7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQvUKDm5CIIum.diag
[2025-06-05 09:11:02] -rw-r--r-- 1 boincer umatlas     21392 Jun  5 09:11 stderr.txt
[2025-06-05 09:11:02] HITS file was successfully produced:
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas 198853239 Jun  5 09:10 shared/HITS.pool.root.1
[2025-06-05 09:11:02]  *** Contents of shared directory: ***
[2025-06-05 09:11:02] total 414508
[2025-06-05 09:11:02] -rw-r--r-- 2 boincer umatlas 224158023 Jun  5 07:37 ATLAS.root_0
[2025-06-05 09:11:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 07:37 start_atlas.sh
[2025-06-05 09:11:02] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 07:37 input.tar.gz
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas 198853239 Jun  5 09:10 HITS.pool.root.1
[2025-06-05 09:11:02] -rw------- 1 boincer umatlas    901120 Jun  5 09:11 result.tar.gz
09:11:03 (14298): run_atlas exited; CPU time 60271.887776
09:11:03 (14298): called boinc_finish(0)

</stderr_txt>
]]>

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