Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:40 (3595): wrapper (7.7.26015): starting
18:33:40 (3595): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 18:33:40] Arguments: --nthreads 8
[2025-06-05 18:33:40] Threads: 8
[2025-06-05 18:33:40] Checking for CVMFS
[2025-06-05 18:33:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 18:33:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 18:33:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 18:33:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 18:33:42] 2.11.2.0 22738 34908 89184 146826 2 14 21756880 25165824 2357 130560 0 17216438 99.797 20818288 2113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 18:33:42] CVMFS is ok
[2025-06-05 18:33:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:33:42] Checking for apptainer binary...
[2025-06-05 18:33:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 18:33:42] Running /usr/bin/apptainer --version
[2025-06-05 18:33:42] apptainer version 1.3.2-1.el7
[2025-06-05 18:33:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 18:33:55] cg-vwn395.simple-grid.lan
[2025-06-05 18:33:55] apptainer works
[2025-06-05 18:33:55] Set ATHENA_PROC_NUMBER=8
[2025-06-05 18:33:55] Set ATHENA_CORE_NUMBER=8
[2025-06-05 18:33:55] Starting ATLAS job with PandaID=6668234445
[2025-06-05 18:33:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:33:00]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:33:00] 2025-06-05 22:08:01,367 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:33:00] 2025-06-05 22:08:01,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:33:00] 2025-06-05 22:08:01,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:33:00] 2025-06-05 22:08:01,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:33:00] 2025-06-05 22:08:01,374 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:33:00] 2025-06-05 22:08:01,375 | INFO     | sum of square deviations: 9784425315.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,378 | INFO     | sum of deviations: 145593400659.99994
[2025-06-06 02:33:00] 2025-06-05 22:08:01,378 | INFO     | mean x: 1749151534.5
[2025-06-06 02:33:00] 2025-06-05 22:08:01,379 | INFO     | mean y: 2446117.379746835
[2025-06-06 02:33:00] 2025-06-05 22:08:01,379 | INFO     | -- intersect: -26025134652.959267
[2025-06-06 02:33:00] 2025-06-05 22:08:01,379 | INFO     | intersect: -26025134652.959267
[2025-06-06 02:33:00] 2025-06-05 22:08:01,379 | INFO     | chi2: 8.122613331730076
[2025-06-06 02:33:00] 2025-06-05 22:08:01,380 | INFO     | sum of square deviations: 9327281860.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,383 | INFO     | sum of deviations: 164044529135.99948
[2025-06-06 02:33:00] 2025-06-05 22:08:01,384 | INFO     | mean x: 1749151382.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,384 | INFO     | mean y: 2452182.803858521
[2025-06-06 02:33:00] 2025-06-05 22:08:01,384 | INFO     | -- intersect: -30760927669.40238
[2025-06-06 02:33:00] 2025-06-05 22:08:01,384 | INFO     | intersect: -30760927669.40238
[2025-06-06 02:33:00] 2025-06-05 22:08:01,385 | INFO     | chi2: 7.408967459634096
[2025-06-06 02:33:00] 2025-06-05 22:08:01,385 | INFO     | current chi2=7.408967459634096 (change=8.785914618244876 %)
[2025-06-06 02:33:00] 2025-06-05 22:08:01,385 | INFO     | right removable region: 310
[2025-06-06 02:33:00] 2025-06-05 22:08:01,385 | INFO     | sum of square deviations: 9327281860.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,389 | INFO     | sum of deviations: 32597674526.99998
[2025-06-06 02:33:00] 2025-06-05 22:08:01,389 | INFO     | mean x: 1749151687.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,389 | INFO     | mean y: 2483797.8649517684
[2025-06-06 02:33:00] 2025-06-05 22:08:01,390 | INFO     | -- intersect: -6110580892.042355
[2025-06-06 02:33:00] 2025-06-05 22:08:01,390 | INFO     | intersect: -6110580892.042355
[2025-06-06 02:33:00] 2025-06-05 22:08:01,390 | INFO     | chi2: 3.037383143727783
[2025-06-06 02:33:00] 2025-06-05 22:08:01,390 | INFO     | current chi2=3.037383143727783 (change=62.60583854382692 %)
[2025-06-06 02:33:00] 2025-06-05 22:08:01,391 | INFO     | sum of square deviations: 8884603792.5
[2025-06-06 02:33:00] 2025-06-05 22:08:01,394 | INFO     | sum of deviations: -37486424428.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,394 | INFO     | mean x: 1749151839.5
[2025-06-06 02:33:00] 2025-06-05 22:08:01,394 | INFO     | mean y: 2507869.4444444445
[2025-06-06 02:33:00] 2025-06-05 22:08:01,394 | INFO     | -- intersect: 7382628556.409106
[2025-06-06 02:33:00] 2025-06-05 22:08:01,394 | INFO     | intersect: 7382628556.409106
[2025-06-06 02:33:00] 2025-06-05 22:08:01,395 | INFO     | chi2: 0.9758688386107183
[2025-06-06 02:33:00] 2025-06-05 22:08:01,395 | INFO     | current chi2=0.9758688386107183 (change=67.87139480161092 %)
[2025-06-06 02:33:00] 2025-06-05 22:08:01,395 | INFO     | sum of square deviations: 8456158550.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,398 | INFO     | sum of deviations: -45257800516.00001
[2025-06-06 02:33:00] 2025-06-05 22:08:01,398 | INFO     | mean x: 1749151992.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,398 | INFO     | mean y: 2510620.4285714286
[2025-06-06 02:33:00] 2025-06-05 22:08:01,399 | INFO     | -- intersect: 9364063086.364779
[2025-06-06 02:33:00] 2025-06-05 22:08:01,399 | INFO     | intersect: 9364063086.364779
[2025-06-06 02:33:00] 2025-06-05 22:08:01,399 | INFO     | chi2: 0.9341532265862258
[2025-06-06 02:33:00] 2025-06-05 22:08:01,399 | INFO     | current chi2=0.9341532265862258 (change=4.27471504099673 %)
[2025-06-06 02:33:00] 2025-06-05 22:08:01,399 | INFO     | left removable region: 30
[2025-06-06 02:33:00] 2025-06-05 22:08:01,400 | INFO     | sum of square deviations: 6806862510.0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,402 | INFO     | sum of deviations: 4314855923.000001
[2025-06-06 02:33:00] 2025-06-05 22:08:01,403 | INFO     | mean x: 1749152266.5
[2025-06-06 02:33:00] 2025-06-05 22:08:01,403 | INFO     | mean y: 2506567.9785714285
[2025-06-06 02:33:00] 2025-06-05 22:08:01,403 | INFO     | -- intersect: -1106277399.1205966
[2025-06-06 02:33:00] 2025-06-05 22:08:01,403 | INFO     | intersect: -1106277399.1205966
[2025-06-06 02:33:00] 2025-06-05 22:08:01,403 | INFO     | chi2: 0.04730407556924309
[2025-06-06 02:33:00] 2025-06-05 22:08:01,403 | INFO     | -- intersect: -1106277399.1205966
[2025-06-06 02:33:00] 2025-06-05 22:08:01,404 | INFO     | current memory leak: 0.63 B/s (using 280 data points, chi2=0.05)
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | ..............................
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . Timing measurements:
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . get job = 0 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . initial setup = 5 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . payload setup = 164 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . stage-in = 0 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . payload execution = 19403 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . stage-out = 4 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,405 | INFO     | . log creation = 1 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,406 | INFO     | ..............................
[2025-06-06 02:33:00] 2025-06-05 22:08:01,557 | INFO     | 
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | job summary report
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | --------------------------------------------------
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | PanDA job id: 6668234445
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | task id: 44871837
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | errors: (none)
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | pilot state: finished 
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | transexitcode: 0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | exeerrorcode: 0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,558 | INFO     | exeerrordiag: 
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | exitcode: 0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | exitmsg: OK
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | cpuconsumptiontime: 72361 s
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | nevents: 400
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | neventsw: 0
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | pid: 22092
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | pgrp: 22092
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | corecount: 8
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | event service: False
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | sizes: {0: 2397221, 1: 2397420, 12: 2397420, 23: 2397448, 33: 2397476, 44: 2397532, 55: 2397688, 65: 2397716, 76: 2397744, 86: 2398006, 87: 2398034, 19572: 2430225
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | --------------------------------------------------
[2025-06-06 02:33:00] 2025-06-05 22:08:01,559 | INFO     | 
[2025-06-06 02:33:00] 2025-06-05 22:08:01,560 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-06 02:33:00] 2025-06-05 22:08:02,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:33:00] 2025-06-05 22:08:02,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:33:00] 2025-06-05 22:08:02,125 | INFO     | job 6668234445 has completed (purged errors)
[2025-06-06 02:33:00] 2025-06-05 22:08:02,125 | INFO     | overall cleanup function is called
[2025-06-06 02:33:00] 2025-06-05 22:08:03,135 | INFO     | --- collectZombieJob: --- 10, [22092]
[2025-06-06 02:33:00] 2025-06-05 22:08:03,135 | INFO     | zombie collector waiting for pid 22092
[2025-06-06 02:33:00] 2025-06-05 22:08:03,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:33:00] 2025-06-05 22:08:03,136 | INFO     | collected zombie processes
[2025-06-06 02:33:00] 2025-06-05 22:08:03,136 | INFO     | will attempt to kill all subprocesses of pid=22092
[2025-06-06 02:33:00] 2025-06-05 22:08:03,283 | INFO     | process IDs to be killed: [22092] (in reverse order)
[2025-06-06 02:33:00] 2025-06-05 22:08:03,744 | INFO     | PID=11558 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 02:33:00] 2025-06-05 22:08:03,744 | INFO     | .. there are 9 such processes running
[2025-06-06 02:33:00] 2025-06-05 22:08:04,032 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:33:00] 2025-06-05 22:08:04,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:33:00] 2025-06-05 22:08:04,037 | INFO     | did not find any defunct processes belonging to 22092
[2025-06-06 02:33:00] 2025-06-05 22:08:04,044 | INFO     | did not find any defunct processes belonging to 22092
[2025-06-06 02:33:00] 2025-06-05 22:08:04,045 | INFO     | ready for new job
[2025-06-06 02:33:00] 2025-06-05 22:08:04,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:33:00] 2025-06-05 22:08:04,047 | INFO     | **************************************
[2025-06-06 02:33:00] 2025-06-05 22:08:04,048 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:33:00] 2025-06-05 22:08:04,048 | INFO     | **************************************
[2025-06-06 02:33:00] 2025-06-05 22:08:04,048 | INFO     | 
[2025-06-06 02:33:00] 2025-06-05 22:08:04,049 | INFO     | pilot is running in a VM
[2025-06-06 02:33:00] 2025-06-05 22:08:04,049 | INFO     | architecture information:
[2025-06-06 02:33:00] 2025-06-05 22:08:04,064 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:33:00] 2025-06-05 22:08:04,309 | INFO     | cat /etc/os-release:
[2025-06-06 02:33:00] NAME="CentOS Linux"
[2025-06-06 02:33:00] VERSION="7 (Core)"
[2025-06-06 02:33:00] ID="centos"
[2025-06-06 02:33:00] ID_LIKE="rhel fedora"
[2025-06-06 02:33:00] VERSION_ID="7"
[2025-06-06 02:33:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:33:00] ANSI_COLOR="0;31"
[2025-06-06 02:33:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:33:00] HOME_URL="https://www.centos.org/"
[2025-06-06 02:33:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:33:00] 
[2025-06-06 02:33:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:33:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:33:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:33:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:33:00] 
[2025-06-06 02:33:00] 2025-06-05 22:08:04,310 | INFO     | **************************************
[2025-06-06 02:33:00] 2025-06-05 22:08:04,813 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-06 02:33:00] 2025-06-05 22:08:05,036 | INFO     | sufficient remaining disk space (497017683968 B)
[2025-06-06 02:33:00] 2025-06-05 22:08:05,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:33:00] 2025-06-05 22:08:05,037 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:33:00] 2025-06-05 22:08:05,037 | INFO     | update_server=False
[2025-06-06 02:33:00] 2025-06-05 22:08:05,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:33:00] 2025-06-05 22:08:05,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:33:00] 2025-06-05 22:08:05,039 | INFO     | aborting loop
[2025-06-06 02:33:00] 2025-06-05 22:08:05,389 | INFO     | all job control threads have been joined
[2025-06-06 02:33:00] 2025-06-05 22:08:05,632 | INFO     | all data control threads have been joined
[2025-06-06 02:33:00] 2025-06-05 22:08:05,754 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:33:00] 2025-06-05 22:08:05,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:33:00] 2025-06-05 22:08:05,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:33:00] 2025-06-05 22:08:05,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:33:00] 2025-06-05 22:08:05,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:33:00] 2025-06-05 22:08:06,044 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,049 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,205 | INFO     | all payload control threads have been joined
[2025-06-06 02:33:00] 2025-06-05 22:08:06,236 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,395 | INFO     | [job] control thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,567 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:33:00] 2025-06-05 22:08:06,638 | INFO     | [data] control thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,930 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:06,949 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:07,008 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:07,109 | INFO     | [job] validate thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:07,114 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:07,211 | INFO     | [payload] control thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:07,578 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:07,801 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:09,994 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:33:00] 2025-06-05 22:08:10,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801781602112)>', '<ExcThread(monitor, started 139801051264768)>']
[2025-06-06 02:33:00] 2025-06-05 22:08:10,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:33:00] 2025-06-05 22:08:10,785 | INFO     | [monitor] control thread has ended
[2025-06-06 02:33:00] 2025-06-05 22:08:15,506 | INFO     | all workflow threads have been joined
[2025-06-06 02:33:00] 2025-06-05 22:08:15,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:33:00] 2025-06-05 22:08:15,507 | INFO     | traces error code: 0
[2025-06-06 02:33:00] 2025-06-05 22:08:15,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:33:00] 2025-06-05 22:08:15,924 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:33:00] 2025-06-05 22:08:16,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:33:00] 2025-06-05 22:08:16,119 [wrapper] pilotpid: 11558
[2025-06-06 02:33:00] 2025-06-05 22:08:16,200 [wrapper] Pilot exit status: 0
[2025-06-06 02:33:00] 2025-06-05 22:08:16,762 [wrapper] pandaids: 6668234445
[2025-06-06 02:33:00] 2025-06-05 22:08:17,377 [wrapper] cleanup supervisor_pilot 25141 11559
[2025-06-06 02:33:00] 2025-06-05 22:08:17,482 [wrapper] Test setup, not cleaning
[2025-06-06 02:33:00] 2025-06-05 22:08:17,559 [wrapper] apfmon messages muted
[2025-06-06 02:33:00] 2025-06-05 22:08:17,671 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:33:00] 2025-06-05 22:08:17,725 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:33:00]  *** Error codes and diagnostics ***
[2025-06-06 02:33:00]     "exeErrorCode": 0,
[2025-06-06 02:33:00]     "exeErrorDiag": "",
[2025-06-06 02:33:00]     "pilotErrorCode": 0,
[2025-06-06 02:33:00]     "pilotErrorDiag": "",
[2025-06-06 02:33:00]  *** Listing of results directory ***
[2025-06-06 02:33:00] total 423872
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc    495897 May 28 10:16 pilot3.tar.gz
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc      5111 May 28 10:58 queuedata.json
[2025-06-06 02:33:00] -rwx------. 1 boinc boinc     37140 May 28 10:59 runpilot2-wrapper.sh
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc       100 Jun  5 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:33:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 18:33 run_atlas
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc       105 Jun  5 18:33 job.xml
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc      6392 Jun  5 18:33 init_data.xml
[2025-06-06 02:33:00] -rw-r--r--. 2 boinc boinc 224631655 Jun  5 18:33 EVNT.44871834._003196.pool.root.1
[2025-06-06 02:33:00] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:33 start_atlas.sh
[2025-06-06 02:33:00] drwxrwx--x. 2 boinc boinc        68 Jun  5 18:33 shared
[2025-06-06 02:33:00] -rw-r--r--. 2 boinc boinc    508880 Jun  5 18:33 input.tar.gz
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc         0 Jun  5 18:33 boinc_lockfile
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc      2559 Jun  5 18:33 pandaJob.out
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc    983229 Jun  5 18:37 agis_schedconf.cvmfs.json
[2025-06-06 02:33:00] drwx------. 4 boinc boinc      4096 Jun  5 18:37 pilot3
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc 201337648 Jun  6 00:04 HITS.44871837._081854.pool.root.1
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc       531 Jun  6 00:05 boinc_task_state.xml
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc      1017 Jun  6 00:06 memory_monitor_summary.json
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc   1598969 Jun  6 00:06 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc    447252 Jun  6 00:06 log.44871837._081854.job.log.tgz.1
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc      7691 Jun  6 00:08 heartbeat.json
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc        95 Jun  6 00:08 pilot_heartbeat.json
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc      4416 Jun  6 00:08 pilotlog.txt
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc   1679299 Jun  6 00:08 log.44871837._081854.job.log.1
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc       357 Jun  6 00:08 output.list
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc       620 Jun  6 00:08 runtime_log
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc   2150400 Jun  6 00:08 result.tar.gz
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc      8659 Jun  6 00:08 runtime_log.err
[2025-06-06 02:33:00] -rw-------. 1 boinc boinc       657 Jun  6 00:08 2OtNDm5nRe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiFTKDm273UXn.diag
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc      8192 Jun  6 02:33 boinc_mmap_file
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc        28 Jun  6 02:33 wrapper_checkpoint.txt
[2025-06-06 02:33:00] -rw-r--r--. 1 boinc boinc     20589 Jun  6 02:33 stderr.txt
[2025-06-06 02:33:00] HITS file was successfully produced:
[2025-06-06 02:33:01] -rw-------. 1 boinc boinc 201337648 Jun  6 00:04 shared/HITS.pool.root.1
[2025-06-06 02:33:01]  *** Contents of shared directory: ***
[2025-06-06 02:33:01] total 418604
[2025-06-06 02:33:01] -rw-r--r--. 2 boinc boinc 224631655 Jun  5 18:33 ATLAS.root_0
[2025-06-06 02:33:01] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:33 start_atlas.sh
[2025-06-06 02:33:01] -rw-r--r--. 2 boinc boinc    508880 Jun  5 18:33 input.tar.gz
[2025-06-06 02:33:01] -rw-------. 1 boinc boinc 201337648 Jun  6 00:04 HITS.pool.root.1
[2025-06-06 02:33:01] -rw-------. 1 boinc boinc   2150400 Jun  6 00:08 result.tar.gz
02:33:02 (3595): run_atlas exited; CPU time 72618.643150
02:33:02 (3595): called boinc_finish(0)

</stderr_txt>
]]>

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