Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:22 (6454): wrapper (7.7.26015): starting
05:13:22 (6454): wrapper: running run_atlas (--nthreads 8)
[2025-06-06 05:13:22] Arguments: --nthreads 8
[2025-06-06 05:13:22] Threads: 8
[2025-06-06 05:13:22] Checking for CVMFS
[2025-06-06 05:13:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:13:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:13:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:13:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:13:25] 2.11.2.0 5632 35527 95596 146840 0 59 22805777 25165825 3905 130560 0 18128532 99.794 20736204 2177 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-06 05:13:25] CVMFS is ok
[2025-06-06 05:13:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:13:25] Checking for apptainer binary...
[2025-06-06 05:13:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 05:13:25] Running /usr/bin/apptainer --version
[2025-06-06 05:13:25] apptainer version 1.3.2-1.el7
[2025-06-06 05:13:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:13:33] cg-vwn252.simple-grid.lan
[2025-06-06 05:13:33] apptainer works
[2025-06-06 05:13:33] Set ATHENA_PROC_NUMBER=8
[2025-06-06 05:13:33] Set ATHENA_CORE_NUMBER=8
[2025-06-06 05:13:33] Starting ATLAS job with PandaID=6668862447
[2025-06-06 05:13:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 10:37:34]  *** The last 200 lines of the pilot log: ***
[2025-06-06 10:37:34] 2025-06-06 08:31:47,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 10:37:34] 2025-06-06 08:31:47,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 10:37:34] 2025-06-06 08:31:47,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 10:37:34] 2025-06-06 08:31:47,635 | INFO     | fitting pss+swap vs Time
[2025-06-06 10:37:34] 2025-06-06 08:31:47,635 | INFO     | sum of square deviations: 8372156975.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,638 | INFO     | sum of deviations: 74360408215.49997
[2025-06-06 10:37:34] 2025-06-06 08:31:47,639 | INFO     | mean x: 1749189442.5
[2025-06-06 10:37:34] 2025-06-06 08:31:47,639 | INFO     | mean y: 2466454.4566666665
[2025-06-06 10:37:34] 2025-06-06 08:31:47,639 | INFO     | -- intersect: -15533606433.204737
[2025-06-06 10:37:34] 2025-06-06 08:31:47,639 | INFO     | intersect: -15533606433.204737
[2025-06-06 10:37:34] 2025-06-06 08:31:47,640 | INFO     | chi2: 7.047085468471167
[2025-06-06 10:37:34] 2025-06-06 08:31:47,640 | INFO     | sum of square deviations: 7960484140.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,643 | INFO     | sum of deviations: 92891201989.99997
[2025-06-06 10:37:34] 2025-06-06 08:31:47,643 | INFO     | mean x: 1749189290.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,643 | INFO     | mean y: 2473219.3559322036
[2025-06-06 10:37:34] 2025-06-06 08:31:47,643 | INFO     | -- intersect: -20408885285.798336
[2025-06-06 10:37:34] 2025-06-06 08:31:47,644 | INFO     | intersect: -20408885285.798336
[2025-06-06 10:37:34] 2025-06-06 08:31:47,644 | INFO     | chi2: 6.3276421879829
[2025-06-06 10:37:34] 2025-06-06 08:31:47,644 | INFO     | current chi2=6.3276421879829 (change=10.209089753587824 %)
[2025-06-06 10:37:34] 2025-06-06 08:31:47,644 | INFO     | right removable region: 294
[2025-06-06 10:37:34] 2025-06-06 08:31:47,645 | INFO     | sum of square deviations: 7960484140.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,648 | INFO     | sum of deviations: -29468116497.000008
[2025-06-06 10:37:34] 2025-06-06 08:31:47,648 | INFO     | mean x: 1749189595.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,648 | INFO     | mean y: 2504886.874576271
[2025-06-06 10:37:34] 2025-06-06 08:31:47,648 | INFO     | -- intersect: 6477654118.288065
[2025-06-06 10:37:34] 2025-06-06 08:31:47,649 | INFO     | intersect: 6477654118.288065
[2025-06-06 10:37:34] 2025-06-06 08:31:47,649 | INFO     | chi2: 2.3690297001549037
[2025-06-06 10:37:34] 2025-06-06 08:31:47,649 | INFO     | current chi2=2.3690297001549037 (change=66.38284421617985 %)
[2025-06-06 10:37:34] 2025-06-06 08:31:47,650 | INFO     | sum of square deviations: 7562532492.5
[2025-06-06 10:37:34] 2025-06-06 08:31:47,652 | INFO     | sum of deviations: -79131038967.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,653 | INFO     | mean x: 1749189747.5
[2025-06-06 10:37:34] 2025-06-06 08:31:47,653 | INFO     | mean y: 2523822.5172413792
[2025-06-06 10:37:34] 2025-06-06 08:31:47,653 | INFO     | -- intersect: 18305281821.556595
[2025-06-06 10:37:34] 2025-06-06 08:31:47,653 | INFO     | intersect: 18305281821.556595
[2025-06-06 10:37:34] 2025-06-06 08:31:47,653 | INFO     | chi2: 1.0431191434916127
[2025-06-06 10:37:34] 2025-06-06 08:31:47,654 | INFO     | current chi2=1.0431191434916127 (change=55.96850713085588 %)
[2025-06-06 10:37:34] 2025-06-06 08:31:47,654 | INFO     | sum of square deviations: 7178069470.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,657 | INFO     | sum of deviations: -77426716291.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,657 | INFO     | mean x: 1749189900.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,657 | INFO     | mean y: 2523121.3929824564
[2025-06-06 10:37:34] 2025-06-06 08:31:47,658 | INFO     | -- intersect: 18870274498.335655
[2025-06-06 10:37:34] 2025-06-06 08:31:47,658 | INFO     | intersect: 18870274498.335655
[2025-06-06 10:37:34] 2025-06-06 08:31:47,658 | INFO     | chi2: 1.0233537321003212
[2025-06-06 10:37:34] 2025-06-06 08:31:47,658 | INFO     | current chi2=1.0233537321003212 (change=1.8948373744854425 %)
[2025-06-06 10:37:34] 2025-06-06 08:31:47,658 | INFO     | left removable region: 30
[2025-06-06 10:37:34] 2025-06-06 08:31:47,659 | INFO     | sum of square deviations: 5705372090.0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,661 | INFO     | sum of deviations: -29623152938.000004
[2025-06-06 10:37:34] 2025-06-06 08:31:47,661 | INFO     | mean x: 1749190174.5
[2025-06-06 10:37:34] 2025-06-06 08:31:47,662 | INFO     | mean y: 2519041.6136363638
[2025-06-06 10:37:34] 2025-06-06 08:31:47,662 | INFO     | -- intersect: 9084578412.935097
[2025-06-06 10:37:34] 2025-06-06 08:31:47,662 | INFO     | intersect: 9084578412.935097
[2025-06-06 10:37:34] 2025-06-06 08:31:47,662 | INFO     | chi2: 0.17722126374154132
[2025-06-06 10:37:34] 2025-06-06 08:31:47,663 | INFO     | -- intersect: 9084578412.935097
[2025-06-06 10:37:34] 2025-06-06 08:31:47,663 | INFO     | current memory leak: -5.19 B/s (using 264 data points, chi2=0.18)
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | ..............................
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | . Timing measurements:
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | . get job = 0 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | . initial setup = 7 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | . payload setup = 167 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | . stage-in = 0 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | . payload execution = 18419 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,664 | INFO     | . stage-out = 3 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,665 | INFO     | . log creation = 1 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,665 | INFO     | ..............................
[2025-06-06 10:37:34] 2025-06-06 08:31:47,812 | INFO     | 
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | job summary report
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | --------------------------------------------------
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | PanDA job id: 6668862447
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | task id: 44871837
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | errors: (none)
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | pilot state: finished 
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | transexitcode: 0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,813 | INFO     | exeerrorcode: 0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | exeerrordiag: 
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | exitcode: 0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | exitmsg: OK
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | cpuconsumptiontime: 68606 s
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | nevents: 400
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | neventsw: 0
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | pid: 19567
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | pgrp: 19567
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | corecount: 8
[2025-06-06 10:37:34] 2025-06-06 08:31:47,814 | INFO     | event service: False
[2025-06-06 10:37:34] 2025-06-06 08:31:47,815 | INFO     | sizes: {0: 2397172, 1: 2397371, 12: 2397371, 23: 2397399, 33: 2397427, 44: 2397483, 55: 2397639, 66: 2397667, 76: 2397695, 82: 2397957, 87: 2398013, 18591: 2429862
[2025-06-06 10:37:34] 2025-06-06 08:31:47,815 | INFO     | --------------------------------------------------
[2025-06-06 10:37:34] 2025-06-06 08:31:47,815 | INFO     | 
[2025-06-06 10:37:34] 2025-06-06 08:31:47,815 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-06 10:37:34] 2025-06-06 08:31:48,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 10:37:34] 2025-06-06 08:31:48,200 | INFO     | job 6668862447 has completed (purged errors)
[2025-06-06 10:37:34] 2025-06-06 08:31:48,200 | INFO     | overall cleanup function is called
[2025-06-06 10:37:34] 2025-06-06 08:31:49,214 | INFO     | --- collectZombieJob: --- 10, [19567]
[2025-06-06 10:37:34] 2025-06-06 08:31:49,215 | INFO     | zombie collector waiting for pid 19567
[2025-06-06 10:37:34] 2025-06-06 08:31:49,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 10:37:34] 2025-06-06 08:31:49,215 | INFO     | collected zombie processes
[2025-06-06 10:37:34] 2025-06-06 08:31:49,215 | INFO     | will attempt to kill all subprocesses of pid=19567
[2025-06-06 10:37:34] 2025-06-06 08:31:49,323 | INFO     | process IDs to be killed: [19567] (in reverse order)
[2025-06-06 10:37:34] 2025-06-06 08:31:50,164 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 10:37:34] 2025-06-06 08:31:50,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 10:37:34] 2025-06-06 08:31:50,167 | INFO     | did not find any defunct processes belonging to 19567
[2025-06-06 10:37:34] 2025-06-06 08:31:50,170 | INFO     | did not find any defunct processes belonging to 19567
[2025-06-06 10:37:34] 2025-06-06 08:31:50,171 | INFO     | ready for new job
[2025-06-06 10:37:34] 2025-06-06 08:31:50,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 10:37:34] 2025-06-06 08:31:50,173 | INFO     | **************************************
[2025-06-06 10:37:34] 2025-06-06 08:31:50,173 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 10:37:34] 2025-06-06 08:31:50,173 | INFO     | **************************************
[2025-06-06 10:37:34] 2025-06-06 08:31:50,173 | INFO     | 
[2025-06-06 10:37:34] 2025-06-06 08:31:50,174 | INFO     | pilot is running in a VM
[2025-06-06 10:37:34] 2025-06-06 08:31:50,174 | INFO     | architecture information:
[2025-06-06 10:37:34] 2025-06-06 08:31:50,179 | INFO     | executing command: cat /etc/os-release
[2025-06-06 10:37:34] 2025-06-06 08:31:50,322 | INFO     | cat /etc/os-release:
[2025-06-06 10:37:34] NAME="CentOS Linux"
[2025-06-06 10:37:34] VERSION="7 (Core)"
[2025-06-06 10:37:34] ID="centos"
[2025-06-06 10:37:34] ID_LIKE="rhel fedora"
[2025-06-06 10:37:34] VERSION_ID="7"
[2025-06-06 10:37:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 10:37:34] ANSI_COLOR="0;31"
[2025-06-06 10:37:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 10:37:34] HOME_URL="https://www.centos.org/"
[2025-06-06 10:37:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 10:37:34] 
[2025-06-06 10:37:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 10:37:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 10:37:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 10:37:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 10:37:34] 
[2025-06-06 10:37:34] 2025-06-06 08:31:50,323 | INFO     | **************************************
[2025-06-06 10:37:34] 2025-06-06 08:31:50,827 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-06 10:37:34] 2025-06-06 08:31:51,115 | INFO     | sufficient remaining disk space (497163436032 B)
[2025-06-06 10:37:34] 2025-06-06 08:31:51,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 10:37:34] 2025-06-06 08:31:51,116 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 10:37:34] 2025-06-06 08:31:51,116 | INFO     | update_server=False
[2025-06-06 10:37:34] 2025-06-06 08:31:51,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 10:37:34] 2025-06-06 08:31:51,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 10:37:34] 2025-06-06 08:31:51,118 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 10:37:34] 2025-06-06 08:31:51,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 10:37:34] 2025-06-06 08:31:51,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 10:37:34] 2025-06-06 08:31:51,195 | INFO     | all data control threads have been joined
[2025-06-06 10:37:34] 2025-06-06 08:31:51,258 | INFO     | all payload control threads have been joined
[2025-06-06 10:37:34] 2025-06-06 08:31:51,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 10:37:34] 2025-06-06 08:31:51,585 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 10:37:34] 2025-06-06 08:31:51,586 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 10:37:34] 2025-06-06 08:31:51,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:37:34] 2025-06-06 08:31:51,586 | INFO     | will abort loop
[2025-06-06 10:37:34] 2025-06-06 08:31:51,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 10:37:34] 2025-06-06 08:31:52,125 | INFO     | [job] retrieve thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,201 | INFO     | [data] control thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,240 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,265 | INFO     | [payload] control thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,365 | INFO     | all job control threads have been joined
[2025-06-06 10:37:34] 2025-06-06 08:31:52,388 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,593 | INFO     | [job] job monitor thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,706 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,815 | INFO     | [data] copytool_in thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:52,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 10:37:34] 2025-06-06 08:31:52,889 | INFO     | [payload] validate_post thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:53,127 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:53,271 | INFO     | [payload] failed_post thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:53,371 | INFO     | [job] control thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:53,507 | INFO     | [job] validate thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:53,524 | INFO     | [data] copytool_out thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:53,831 | INFO     | [job] queue monitor thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:55,856 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 10:37:34] 2025-06-06 08:31:57,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574644987712)>', '<ExcThread(monitor, started 140574053091072)>']
[2025-06-06 10:37:34] 2025-06-06 08:31:58,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 10:37:34] 2025-06-06 08:31:58,160 | INFO     | [monitor] control thread has ended
[2025-06-06 10:37:34] 2025-06-06 08:32:02,584 | INFO     | all workflow threads have been joined
[2025-06-06 10:37:34] 2025-06-06 08:32:02,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 10:37:34] 2025-06-06 08:32:02,585 | INFO     | traces error code: 0
[2025-06-06 10:37:34] 2025-06-06 08:32:02,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 10:37:34] 2025-06-06 08:32:02,942 [wrapper] ==== pilot stdout END ====
[2025-06-06 10:37:34] 2025-06-06 08:32:02,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 10:37:34] 2025-06-06 08:32:03,036 [wrapper] pilotpid: 10924
[2025-06-06 10:37:34] 2025-06-06 08:32:03,086 [wrapper] Pilot exit status: 0
[2025-06-06 10:37:34] 2025-06-06 08:32:03,562 [wrapper] pandaids: 6668862447
[2025-06-06 10:37:34] 2025-06-06 08:32:04,468 [wrapper] cleanup supervisor_pilot 26869 10925
[2025-06-06 10:37:34] 2025-06-06 08:32:04,517 [wrapper] Test setup, not cleaning
[2025-06-06 10:37:34] 2025-06-06 08:32:04,573 [wrapper] apfmon messages muted
[2025-06-06 10:37:34] 2025-06-06 08:32:04,690 [wrapper] ==== wrapper stdout END ====
[2025-06-06 10:37:34] 2025-06-06 08:32:04,753 [wrapper] ==== wrapper stderr END ====
[2025-06-06 10:37:34]  *** Error codes and diagnostics ***
[2025-06-06 10:37:34]     "exeErrorCode": 0,
[2025-06-06 10:37:34]     "exeErrorDiag": "",
[2025-06-06 10:37:34]     "pilotErrorCode": 0,
[2025-06-06 10:37:34]     "pilotErrorDiag": "",
[2025-06-06 10:37:34]  *** Listing of results directory ***
[2025-06-06 10:37:34] total 418076
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc    495897 May 28 21:15 pilot3.tar.gz
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc      5111 May 28 21:16 queuedata.json
[2025-06-06 10:37:34] -rwx------. 1 boinc boinc     37140 May 28 21:16 runpilot2-wrapper.sh
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc       100 Jun  6 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 10:37:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 05:13 run_atlas
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc       105 Jun  6 05:13 job.xml
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc      6391 Jun  6 05:13 init_data.xml
[2025-06-06 10:37:34] -rw-r--r--. 2 boinc boinc 224301954 Jun  6 05:13 EVNT.44871834._002004.pool.root.1
[2025-06-06 10:37:34] -rw-r--r--. 2 boinc boinc     15093 Jun  6 05:13 start_atlas.sh
[2025-06-06 10:37:34] drwxrwx--x. 2 boinc boinc        68 Jun  6 05:13 shared
[2025-06-06 10:37:34] -rw-r--r--. 2 boinc boinc    508884 Jun  6 05:13 input.tar.gz
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc         0 Jun  6 05:13 boinc_lockfile
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc      2559 Jun  6 05:13 pandaJob.out
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc    987721 Jun  6 05:17 agis_schedconf.cvmfs.json
[2025-06-06 10:37:34] drwx------. 4 boinc boinc      4096 Jun  6 05:17 pilot3
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc 195906068 Jun  6 10:28 HITS.44871837._089379.pool.root.1
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc       531 Jun  6 10:28 boinc_task_state.xml
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc      1016 Jun  6 10:29 memory_monitor_summary.json
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc   1598969 Jun  6 10:29 agis_ddmendpoints.agis.ALL.json
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc    432551 Jun  6 10:29 log.44871837._089379.job.log.tgz.1
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc        95 Jun  6 10:31 pilot_heartbeat.json
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc      7691 Jun  6 10:31 heartbeat.json
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc      4726 Jun  6 10:32 pilotlog.txt
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc   1604640 Jun  6 10:32 log.44871837._089379.job.log.1
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc       357 Jun  6 10:32 output.list
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc       620 Jun  6 10:32 runtime_log
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc   2058240 Jun  6 10:32 result.tar.gz
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc      8673 Jun  6 10:32 runtime_log.err
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc       657 Jun  6 10:32 EoOMDmPRbe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlucKDmZBXgSm.diag
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc      8192 Jun  6 10:37 boinc_mmap_file
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc        28 Jun  6 10:37 wrapper_checkpoint.txt
[2025-06-06 10:37:34] -rw-r--r--. 1 boinc boinc     20537 Jun  6 10:37 stderr.txt
[2025-06-06 10:37:34] HITS file was successfully produced:
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc 195906068 Jun  6 10:28 shared/HITS.pool.root.1
[2025-06-06 10:37:34]  *** Contents of shared directory: ***
[2025-06-06 10:37:34] total 412892
[2025-06-06 10:37:34] -rw-r--r--. 2 boinc boinc 224301954 Jun  6 05:13 ATLAS.root_0
[2025-06-06 10:37:34] -rw-r--r--. 2 boinc boinc     15093 Jun  6 05:13 start_atlas.sh
[2025-06-06 10:37:34] -rw-r--r--. 2 boinc boinc    508884 Jun  6 05:13 input.tar.gz
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc 195906068 Jun  6 10:28 HITS.pool.root.1
[2025-06-06 10:37:34] -rw-------. 1 boinc boinc   2058240 Jun  6 10:32 result.tar.gz
10:37:36 (6454): run_atlas exited; CPU time 68861.836424
10:37:36 (6454): called boinc_finish(0)

</stderr_txt>
]]>

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