Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:10:24 (10204): wrapper (7.7.26015): starting
07:10:24 (10204): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 07:10:24] Arguments: --nthreads 12
[2025-06-05 07:10:24] Threads: 12
[2025-06-05 07:10:24] Checking for CVMFS
[2025-06-05 07:10:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:10:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:10:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:10:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:10:24] 2.11.2.0 2916 36997 90500 146816 0 1 11830032 20275201 1 130560 0 16798587 99.983 6827078 8111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 07:10:24] CVMFS is ok
[2025-06-05 07:10:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:10:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:10:24] Further information can be found at the LHC@home message board.
[2025-06-05 07:10:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:10:24] Checking for apptainer binary...
[2025-06-05 07:10:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:10:24] Running /usr/bin/apptainer --version
[2025-06-05 07:10:24] apptainer version 1.3.2-1.el7
[2025-06-05 07:10:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:10:26] c-205-23.aglt2.org
[2025-06-05 07:10:26] apptainer works
[2025-06-05 07:10:26] Set ATHENA_PROC_NUMBER=12
[2025-06-05 07:10:26] Set ATHENA_CORE_NUMBER=12
[2025-06-05 07:10:26] Starting ATLAS job with PandaID=6668045383
[2025-06-05 07:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:44:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:44:26]  is_altstaged=None
[2025-06-05 08:44:26]  is_tar=False
[2025-06-05 08:44:26]  lfn=log.44871837._079040.job.log.tgz.1
[2025-06-05 08:44:26]  mtime=0
[2025-06-05 08:44:26]  protocol_id=None
[2025-06-05 08:44:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 08:44:26]  replicas=None
[2025-06-05 08:44:26]  scope=mc23_13p6TeV
[2025-06-05 08:44:26]  status=None
[2025-06-05 08:44:26]  status_code=0
[2025-06-05 08:44:26]  storage_token=
[2025-06-05 08:44:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668045383/log.44871837._079040.job.log.tgz.1
[2025-06-05 08:44:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/18/log.44871837._079040.job.log.tgz.1
[2025-06-05 08:44:26]  workdir=None
[2025-06-05 08:44:26] ]
[2025-06-05 08:44:26] 2025-06-05 12:44:05,053 | INFO     | transferring file log.44871837._079040.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668045383/log.44871837._079040.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 08:44:26] 2025-06-05 12:44:05,053 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668045383/log.44871837._079040.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._079040.job
[2025-06-05 08:44:26] 2025-06-05 12:44:05,076 | INFO     | adding to output.list: log.44871837._079040.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/18/log.44871837._079040.job.log.tg
[2025-06-05 08:44:26] 2025-06-05 12:44:05,077 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 08:44:26] 2025-06-05 12:44:05,077 | INFO     | summary of transferred files:
[2025-06-05 08:44:26] 2025-06-05 12:44:05,077 | INFO     |  -- lfn=log.44871837._079040.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 08:44:26] 2025-06-05 12:44:05,077 | INFO     | stage-out finished correctly
[2025-06-05 08:44:26] 2025-06-05 12:44:05,164 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 08:44:26] 2025-06-05 12:44:05,961 | INFO     | monitor loop #418: job 0:6668045383 is in state 'finished'
[2025-06-05 08:44:26] 2025-06-05 12:44:05,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:44:26] 2025-06-05 12:44:06,695 | INFO     | job 6668045383 has state=finished
[2025-06-05 08:44:26] 2025-06-05 12:44:06,695 | INFO     | preparing for final server update for job 6668045383 in state='finished'
[2025-06-05 08:44:26] 2025-06-05 12:44:06,696 | INFO     | this job has now completed (state=finished)
[2025-06-05 08:44:26] 2025-06-05 12:44:06,696 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 08:44:26] 2025-06-05 12:44:06,696 | INFO     | log transfer has been attempted: DONE
[2025-06-05 08:44:26] 2025-06-05 12:44:06,696 | INFO     | job 6668045383 has finished - writing final server update
[2025-06-05 08:44:26] 2025-06-05 12:44:06,697 | INFO     | total number of processed events: 400 (read)
[2025-06-05 08:44:26] 2025-06-05 12:44:06,698 | INFO     | executing command: lscpu
[2025-06-05 08:44:26] 2025-06-05 12:44:06,725 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:44:26] 2025-06-05 12:44:08,464 | INFO     | monitor loop #419: job 0:6668045383 is in state 'finished'
[2025-06-05 08:44:26] 2025-06-05 12:44:08,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:44:26] 2025-06-05 12:44:10,967 | INFO     | monitor loop #420: job 0:6668045383 is in state 'finished'
[2025-06-05 08:44:26] 2025-06-05 12:44:10,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:44:26] 2025-06-05 12:44:11,361 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 08:44:26] 2025-06-05 12:44:11,361 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668045383/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:44:26] 2025-06-05 12:44:11,362 | INFO     | extracted standard info from prmon json
[2025-06-05 08:44:26] 2025-06-05 12:44:11,362 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:44:26] 2025-06-05 12:44:11,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:44:26] 2025-06-05 12:44:11,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:44:26] 2025-06-05 12:44:11,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:44:26] 2025-06-05 12:44:11,366 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:44:26] 2025-06-05 12:44:11,367 | INFO     | sum of square deviations: 190403570.0
[2025-06-05 08:44:26] 2025-06-05 12:44:11,367 | INFO     | sum of deviations: -7444981741.000001
[2025-06-05 08:44:26] 2025-06-05 12:44:11,367 | INFO     | mean x: 1749124739.0
[2025-06-05 08:44:26] 2025-06-05 12:44:11,368 | INFO     | mean y: 2733522.4
[2025-06-05 08:44:26] 2025-06-05 12:44:11,368 | INFO     | -- intersect: 68395367886.27454
[2025-06-05 08:44:26] 2025-06-05 12:44:11,368 | INFO     | intersect: 68395367886.27454
[2025-06-05 08:44:26] 2025-06-05 12:44:11,368 | INFO     | chi2: 0.09426776106266306
[2025-06-05 08:44:26] 2025-06-05 12:44:11,368 | INFO     | -- intersect: 68395367886.27454
[2025-06-05 08:44:26] 2025-06-05 12:44:11,369 | INFO     | current memory leak: -39.10 B/s (using 85 data points, chi2=0.09)
[2025-06-05 08:44:26] 2025-06-05 12:44:11,369 | INFO     | ..............................
[2025-06-05 08:44:26] 2025-06-05 12:44:11,369 | INFO     | . Timing measurements:
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | . get job = 0 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | . initial setup = 2 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | . payload setup = 9 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | . stage-in = 0 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | . payload execution = 5573 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | . stage-out = 0 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | . log creation = 0 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,370 | INFO     | ..............................
[2025-06-05 08:44:26] 2025-06-05 12:44:11,454 | INFO     | 
[2025-06-05 08:44:26] 2025-06-05 12:44:11,454 | INFO     | job summary report
[2025-06-05 08:44:26] 2025-06-05 12:44:11,455 | INFO     | --------------------------------------------------
[2025-06-05 08:44:26] 2025-06-05 12:44:11,455 | INFO     | PanDA job id: 6668045383
[2025-06-05 08:44:26] 2025-06-05 12:44:11,455 | INFO     | task id: 44871837
[2025-06-05 08:44:26] 2025-06-05 12:44:11,455 | INFO     | errors: (none)
[2025-06-05 08:44:26] 2025-06-05 12:44:11,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:44:26] 2025-06-05 12:44:11,455 | INFO     | pilot state: finished 
[2025-06-05 08:44:26] 2025-06-05 12:44:11,456 | INFO     | transexitcode: 0
[2025-06-05 08:44:26] 2025-06-05 12:44:11,456 | INFO     | exeerrorcode: 0
[2025-06-05 08:44:26] 2025-06-05 12:44:11,456 | INFO     | exeerrordiag: 
[2025-06-05 08:44:26] 2025-06-05 12:44:11,456 | INFO     | exitcode: 0
[2025-06-05 08:44:26] 2025-06-05 12:44:11,456 | INFO     | exitmsg: OK
[2025-06-05 08:44:26] 2025-06-05 12:44:11,456 | INFO     | cpuconsumptiontime: 61182 s
[2025-06-05 08:44:26] 2025-06-05 12:44:11,456 | INFO     | nevents: 400
[2025-06-05 08:44:26] 2025-06-05 12:44:11,457 | INFO     | neventsw: 0
[2025-06-05 08:44:26] 2025-06-05 12:44:11,457 | INFO     | pid: 20258
[2025-06-05 08:44:26] 2025-06-05 12:44:11,457 | INFO     | pgrp: 20258
[2025-06-05 08:44:26] 2025-06-05 12:44:11,457 | INFO     | corecount: 12
[2025-06-05 08:44:26] 2025-06-05 12:44:11,457 | INFO     | event service: False
[2025-06-05 08:44:26] 2025-06-05 12:44:11,457 | INFO     | sizes: {0: 2397220, 1: 2397419, 6: 2397625, 11: 2397653, 5587: 2424097, 5588: 2433222, 5595: 2433336}
[2025-06-05 08:44:26] 2025-06-05 12:44:11,458 | INFO     | --------------------------------------------------
[2025-06-05 08:44:26] 2025-06-05 12:44:11,458 | INFO     | 
[2025-06-05 08:44:26] 2025-06-05 12:44:11,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:44:26] 2025-06-05 12:44:11,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,483 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,483 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,483 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,483 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:44:26] 2025-06-05 12:44:11,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,486 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:44:26] 2025-06-05 12:44:11,486 | INFO     | job 6668045383 has completed (purged errors)
[2025-06-05 08:44:26] 2025-06-05 12:44:11,486 | INFO     | overall cleanup function is called
[2025-06-05 08:44:26] 2025-06-05 12:44:12,495 | INFO     | --- collectZombieJob: --- 10, [20258]
[2025-06-05 08:44:26] 2025-06-05 12:44:12,495 | INFO     | zombie collector waiting for pid 20258
[2025-06-05 08:44:26] 2025-06-05 12:44:12,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:44:26] 2025-06-05 12:44:12,495 | INFO     | collected zombie processes
[2025-06-05 08:44:26] 2025-06-05 12:44:12,496 | INFO     | will attempt to kill all subprocesses of pid=20258
[2025-06-05 08:44:26] 2025-06-05 12:44:12,584 | INFO     | process IDs to be killed: [20258] (in reverse order)
[2025-06-05 08:44:26] 2025-06-05 12:44:12,635 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:44:26] 2025-06-05 12:44:12,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:44:26] 2025-06-05 12:44:12,639 | INFO     | did not find any defunct processes belonging to 20258
[2025-06-05 08:44:26] 2025-06-05 12:44:12,641 | INFO     | did not find any defunct processes belonging to 20258
[2025-06-05 08:44:26] 2025-06-05 12:44:12,641 | INFO     | ready for new job
[2025-06-05 08:44:26] 2025-06-05 12:44:12,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:44:26] 2025-06-05 12:44:12,642 | INFO     | **************************************
[2025-06-05 08:44:26] 2025-06-05 12:44:12,643 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:44:26] 2025-06-05 12:44:12,643 | INFO     | **************************************
[2025-06-05 08:44:26] 2025-06-05 12:44:12,643 | INFO     | 
[2025-06-05 08:44:26] 2025-06-05 12:44:12,643 | INFO     | architecture information:
[2025-06-05 08:44:26] 2025-06-05 12:44:12,644 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:44:26] 2025-06-05 12:44:12,659 | INFO     | cat /etc/os-release:
[2025-06-05 08:44:26] NAME="CentOS Linux"
[2025-06-05 08:44:26] VERSION="7 (Core)"
[2025-06-05 08:44:26] ID="centos"
[2025-06-05 08:44:26] ID_LIKE="rhel fedora"
[2025-06-05 08:44:26] VERSION_ID="7"
[2025-06-05 08:44:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:44:26] ANSI_COLOR="0;31"
[2025-06-05 08:44:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:44:26] HOME_URL="https://www.centos.org/"
[2025-06-05 08:44:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:44:26] 
[2025-06-05 08:44:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:44:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:44:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:44:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:44:26] 
[2025-06-05 08:44:26] 2025-06-05 12:44:12,659 | INFO     | **************************************
[2025-06-05 08:44:26] 2025-06-05 12:44:13,162 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:44:26] 2025-06-05 12:44:13,179 | INFO     | sufficient remaining disk space (29379002368 B)
[2025-06-05 08:44:26] 2025-06-05 12:44:13,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:44:26] 2025-06-05 12:44:13,179 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:44:26] 2025-06-05 12:44:13,180 | INFO     | update_server=False
[2025-06-05 08:44:26] 2025-06-05 12:44:13,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:44:26] 2025-06-05 12:44:13,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:44:26] 2025-06-05 12:44:13,180 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:44:26] 2025-06-05 12:44:13,181 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:44:26] 2025-06-05 12:44:13,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:44:26] 2025-06-05 12:44:13,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:44:26] 2025-06-05 12:44:13,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:44:26] 2025-06-05 12:44:13,403 | INFO     | all job control threads have been joined
[2025-06-05 08:44:26] 2025-06-05 12:44:13,470 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 08:44:26] 2025-06-05 12:44:13,470 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 08:44:26] 2025-06-05 12:44:13,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:44:26] 2025-06-05 12:44:13,480 | INFO     | will abort loop
[2025-06-05 08:44:26] 2025-06-05 12:44:13,587 | INFO     | all data control threads have been joined
[2025-06-05 08:44:26] 2025-06-05 12:44:14,166 | INFO     | all payload control threads have been joined
[2025-06-05 08:44:26] 2025-06-05 12:44:14,185 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,186 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,263 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,409 | INFO     | [job] control thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,485 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,593 | INFO     | [data] control thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,734 | INFO     | [job] validate thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:14,838 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:15,019 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:15,124 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:15,171 | INFO     | [payload] control thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:15,187 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:15,294 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:15,646 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:15,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:44:26] 2025-06-05 12:44:19,761 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:44:26] 2025-06-05 12:44:20,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107117696832)>', '<ExcThread(monitor, started 140106430134016)>']
[2025-06-05 08:44:26] 2025-06-05 12:44:21,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:44:26] 2025-06-05 12:44:21,214 | INFO     | [monitor] control thread has ended
[2025-06-05 08:44:26] 2025-06-05 12:44:25,974 | INFO     | all workflow threads have been joined
[2025-06-05 08:44:26] 2025-06-05 12:44:25,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:44:26] 2025-06-05 12:44:25,975 | INFO     | traces error code: 0
[2025-06-05 08:44:26] 2025-06-05 12:44:25,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:44:26] 2025-06-05 12:44:26,059 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:44:26] 2025-06-05 12:44:26,063 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:44:26] 2025-06-05 12:44:26,067 [wrapper] pilotpid: 13802
[2025-06-05 08:44:26] 2025-06-05 12:44:26,071 [wrapper] Pilot exit status: 0
[2025-06-05 08:44:26] 2025-06-05 12:44:26,087 [wrapper] pandaids: 6668045383
[2025-06-05 08:44:26] 2025-06-05 12:44:26,125 [wrapper] cleanup supervisor_pilot 11297 13803
[2025-06-05 08:44:26] 2025-06-05 12:44:26,129 [wrapper] Test setup, not cleaning
[2025-06-05 08:44:26] 2025-06-05 12:44:26,133 [wrapper] apfmon messages muted
[2025-06-05 08:44:26] 2025-06-05 12:44:26,137 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:44:26] 2025-06-05 12:44:26,141 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:44:26]  *** Error codes and diagnostics ***
[2025-06-05 08:44:26]     "exeErrorCode": 0,
[2025-06-05 08:44:26]     "exeErrorDiag": "",
[2025-06-05 08:44:26]     "pilotErrorCode": 0,
[2025-06-05 08:44:26]     "pilotErrorDiag": "",
[2025-06-05 08:44:26]  *** Listing of results directory ***
[2025-06-05 08:44:26] total 420600
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas    503527 Apr  3 03:42 pilot3.tar.gz
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas      5111 May 28 01:05 queuedata.json
[2025-06-05 08:44:26] -rwx------ 1 boincer umatlas     37140 May 28 01:09 runpilot2-wrapper.sh
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas       100 Jun  5 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:44:26] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 07:10 run_atlas
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas       105 Jun  5 07:10 job.xml
[2025-06-05 08:44:26] -rw-r--r-- 2 boincer umatlas 226764768 Jun  5 07:10 EVNT.44871834._003089.pool.root.1
[2025-06-05 08:44:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 07:10 start_atlas.sh
[2025-06-05 08:44:26] drwxrwx--x 2 boincer umatlas      4096 Jun  5 07:10 shared
[2025-06-05 08:44:26] -rw-r--r-- 2 boincer umatlas    517098 Jun  5 07:10 input.tar.gz
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas         0 Jun  5 07:10 boinc_lockfile
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 07:10 pandaJob.out
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas    982836 Jun  5 07:10 agis_schedconf.cvmfs.json
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas   1598969 Jun  5 07:10 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:44:26] drwx------ 4 boincer umatlas      4096 Jun  5 07:10 pilot3
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas      5868 Jun  5 08:36 init_data.xml
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas 198291265 Jun  5 08:43 HITS.44871837._079040.pool.root.1
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas        95 Jun  5 08:43 pilot_heartbeat.json
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas      1047 Jun  5 08:44 memory_monitor_summary.json
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas       530 Jun  5 08:44 boinc_task_state.xml
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas    377599 Jun  5 08:44 log.44871837._079040.job.log.tgz.1
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas      7749 Jun  5 08:44 heartbeat.json
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas        27 Jun  5 08:44 wrapper_checkpoint.txt
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 08:44 boinc_mmap_file
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas      4662 Jun  5 08:44 pilotlog.txt
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas    526676 Jun  5 08:44 log.44871837._079040.job.log.1
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas       357 Jun  5 08:44 output.list
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas       620 Jun  5 08:44 runtime_log
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas    921600 Jun  5 08:44 result.tar.gz
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 08:44 runtime_log.err
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas       659 Jun  5 08:44 gRbNDmvDOe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIxSKDmwR4YDn.diag
[2025-06-05 08:44:26] -rw-r--r-- 1 boincer umatlas     21380 Jun  5 08:44 stderr.txt
[2025-06-05 08:44:26] HITS file was successfully produced:
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas 198291265 Jun  5 08:43 shared/HITS.pool.root.1
[2025-06-05 08:44:26]  *** Contents of shared directory: ***
[2025-06-05 08:44:26] total 416520
[2025-06-05 08:44:26] -rw-r--r-- 2 boincer umatlas 226764768 Jun  5 07:10 ATLAS.root_0
[2025-06-05 08:44:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 07:10 start_atlas.sh
[2025-06-05 08:44:26] -rw-r--r-- 2 boincer umatlas    517098 Jun  5 07:10 input.tar.gz
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas 198291265 Jun  5 08:43 HITS.pool.root.1
[2025-06-05 08:44:26] -rw------- 1 boincer umatlas    921600 Jun  5 08:44 result.tar.gz
08:44:28 (10204): run_atlas exited; CPU time 61148.146703
08:44:28 (10204): called boinc_finish(0)

</stderr_txt>
]]>

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