Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:08:54 (3974244): wrapper (7.7.26015): starting
07:08:54 (3974244): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 07:08:54] Arguments: --nthreads 12
[2025-06-05 07:08:54] Threads: 12
[2025-06-05 07:08:54] Checking for CVMFS
[2025-06-05 07:08:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:08:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:08:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:08:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:08:54] 2.12.6.0 3367424 24649 467256 146816 3 125 22457753 32935936 9833 16776704 0 90241696 99.618 89973995 32581 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 07:08:54] CVMFS is ok
[2025-06-05 07:08:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:08:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:08:54] Further information can be found at the LHC@home message board.
[2025-06-05 07:08:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:08:54] Checking for apptainer binary...
[2025-06-05 07:08:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:08:54] Running /usr/bin/apptainer --version
[2025-06-05 07:08:55] apptainer version 1.4.1-1.el9
[2025-06-05 07:08:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:08:55] c6-2-29-4.aglt2.org
[2025-06-05 07:08:55] apptainer works
[2025-06-05 07:08:55] Set ATHENA_PROC_NUMBER=12
[2025-06-05 07:08:55] Set ATHENA_CORE_NUMBER=12
[2025-06-05 07:08:55] Starting ATLAS job with PandaID=6668688111
[2025-06-05 07:08:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:46:17]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:46:17]  filetype=log
[2025-06-05 08:46:17]  guid=8a8d3edc-0d0c-4acf-af5e-90f6e5eabc9f
[2025-06-05 08:46:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 08:46:17]  is_altstaged=None
[2025-06-05 08:46:17]  is_tar=False
[2025-06-05 08:46:17]  lfn=log.44871837._086799.job.log.tgz.1
[2025-06-05 08:46:17]  mtime=0
[2025-06-05 08:46:17]  protocol_id=None
[2025-06-05 08:46:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 08:46:17]  replicas=None
[2025-06-05 08:46:17]  scope=mc23_13p6TeV
[2025-06-05 08:46:17]  status=None
[2025-06-05 08:46:17]  status_code=0
[2025-06-05 08:46:17]  storage_token=
[2025-06-05 08:46:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668688111/log.44871837._086799.job.log.tgz.1
[2025-06-05 08:46:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/69/log.44871837._086799.job.log.tgz.1
[2025-06-05 08:46:17]  workdir=None
[2025-06-05 08:46:17] ]
[2025-06-05 08:46:17] 2025-06-05 12:45:52,246 | INFO     | transferring file log.44871837._086799.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668688111/log.44871837._086799.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 08:46:17] 2025-06-05 12:45:52,246 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668688111/log.44871837._086799.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._086799.job
[2025-06-05 08:46:17] 2025-06-05 12:45:52,269 | INFO     | adding to output.list: log.44871837._086799.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/69/log.44871837._086799.job.log.tg
[2025-06-05 08:46:17] 2025-06-05 12:45:52,270 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 08:46:17] 2025-06-05 12:45:52,270 | INFO     | summary of transferred files:
[2025-06-05 08:46:17] 2025-06-05 12:45:52,270 | INFO     |  -- lfn=log.44871837._086799.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 08:46:17] 2025-06-05 12:45:52,270 | INFO     | stage-out finished correctly
[2025-06-05 08:46:17] 2025-06-05 12:45:52,826 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 08:46:17] 2025-06-05 12:45:52,920 | INFO     | job 6668688111 has state=finished
[2025-06-05 08:46:17] 2025-06-05 12:45:52,921 | INFO     | preparing for final server update for job 6668688111 in state='finished'
[2025-06-05 08:46:17] 2025-06-05 12:45:52,921 | INFO     | this job has now completed (state=finished)
[2025-06-05 08:46:17] 2025-06-05 12:45:52,922 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 08:46:17] 2025-06-05 12:45:52,922 | INFO     | log transfer has been attempted: DONE
[2025-06-05 08:46:17] 2025-06-05 12:45:52,922 | INFO     | job 6668688111 has finished - writing final server update
[2025-06-05 08:46:17] 2025-06-05 12:45:52,922 | INFO     | total number of processed events: 400 (read)
[2025-06-05 08:46:17] 2025-06-05 12:45:52,937 | INFO     | executing command: lscpu
[2025-06-05 08:46:17] 2025-06-05 12:45:53,020 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:46:17] 2025-06-05 12:45:53,211 | INFO     | monitor loop #394: job 0:6668688111 is in state 'finished'
[2025-06-05 08:46:17] 2025-06-05 12:45:53,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:46:17] 2025-06-05 12:45:55,714 | INFO     | monitor loop #395: job 0:6668688111 is in state 'finished'
[2025-06-05 08:46:17] 2025-06-05 12:45:55,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:46:17] 2025-06-05 12:45:57,158 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 08:46:17] 2025-06-05 12:45:57,159 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668688111/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:46:17] 2025-06-05 12:45:57,159 | INFO     | extracted standard info from prmon json
[2025-06-05 08:46:17] 2025-06-05 12:45:57,159 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:46:17] 2025-06-05 12:45:57,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:46:17] 2025-06-05 12:45:57,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:46:17] 2025-06-05 12:45:57,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:46:17] 2025-06-05 12:45:57,161 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:46:17] 2025-06-05 12:45:57,161 | INFO     | sum of square deviations: 211325487.4545459
[2025-06-05 08:46:17] 2025-06-05 12:45:57,161 | INFO     | sum of deviations: -17605046004.45455
[2025-06-05 08:46:17] 2025-06-05 12:45:57,161 | INFO     | mean x: 1749124728.7272727
[2025-06-05 08:46:17] 2025-06-05 12:45:57,161 | INFO     | mean y: 2483701.772727273
[2025-06-05 08:46:17] 2025-06-05 12:45:57,161 | INFO     | -- intersect: 145718088987.6524
[2025-06-05 08:46:17] 2025-06-05 12:45:57,161 | INFO     | intersect: 145718088987.6524
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | chi2: 0.2115172260279406
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | -- intersect: 145718088987.6524
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | current memory leak: -83.31 B/s (using 88 data points, chi2=0.21)
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | ..............................
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . Timing measurements:
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . get job = 0 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . initial setup = 2 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . payload setup = 6 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . stage-in = 0 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . payload execution = 5781 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . stage-out = 0 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | . log creation = 0 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,162 | INFO     | ..............................
[2025-06-05 08:46:17] 2025-06-05 12:45:57,382 | INFO     | 
[2025-06-05 08:46:17] 2025-06-05 12:45:57,382 | INFO     | job summary report
[2025-06-05 08:46:17] 2025-06-05 12:45:57,382 | INFO     | --------------------------------------------------
[2025-06-05 08:46:17] 2025-06-05 12:45:57,382 | INFO     | PanDA job id: 6668688111
[2025-06-05 08:46:17] 2025-06-05 12:45:57,382 | INFO     | task id: 44871837
[2025-06-05 08:46:17] 2025-06-05 12:45:57,382 | INFO     | errors: (none)
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | pilot state: finished 
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | transexitcode: 0
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | exeerrorcode: 0
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | exeerrordiag: 
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | exitcode: 0
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | exitmsg: OK
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | cpuconsumptiontime: 49488 s
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | nevents: 400
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | neventsw: 0
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | pid: 3984211
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | pgrp: 3984211
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | corecount: 12
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | event service: False
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5791: 2424294, 5792: 2433235, 5793: 2433291, 5797: 2433589}
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | --------------------------------------------------
[2025-06-05 08:46:17] 2025-06-05 12:45:57,383 | INFO     | 
[2025-06-05 08:46:17] 2025-06-05 12:45:57,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:46:17] 2025-06-05 12:45:57,405 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,405 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,405 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,405 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:46:17] 2025-06-05 12:45:57,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:46:17] 2025-06-05 12:45:57,407 | INFO     | job 6668688111 has completed (purged errors)
[2025-06-05 08:46:17] 2025-06-05 12:45:57,407 | INFO     | overall cleanup function is called
[2025-06-05 08:46:17] 2025-06-05 12:45:58,415 | INFO     | --- collectZombieJob: --- 10, [3984211]
[2025-06-05 08:46:17] 2025-06-05 12:45:58,416 | INFO     | zombie collector waiting for pid 3984211
[2025-06-05 08:46:17] 2025-06-05 12:45:58,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:46:17] 2025-06-05 12:45:58,417 | INFO     | collected zombie processes
[2025-06-05 08:46:17] 2025-06-05 12:45:58,417 | INFO     | will attempt to kill all subprocesses of pid=3984211
[2025-06-05 08:46:17] 2025-06-05 12:45:58,653 | INFO     | process IDs to be killed: [3984211] (in reverse order)
[2025-06-05 08:46:17] 2025-06-05 12:45:58,734 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:46:17] 2025-06-05 12:45:58,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:46:17] 2025-06-05 12:45:58,745 | INFO     | did not find any defunct processes belonging to 3984211
[2025-06-05 08:46:17] 2025-06-05 12:45:58,756 | INFO     | did not find any defunct processes belonging to 3984211
[2025-06-05 08:46:17] 2025-06-05 12:45:58,757 | INFO     | ready for new job
[2025-06-05 08:46:17] 2025-06-05 12:45:58,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:46:17] 2025-06-05 12:45:58,760 | INFO     | **************************************
[2025-06-05 08:46:17] 2025-06-05 12:45:58,761 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:46:17] 2025-06-05 12:45:58,761 | INFO     | **************************************
[2025-06-05 08:46:17] 2025-06-05 12:45:58,761 | INFO     | 
[2025-06-05 08:46:17] 2025-06-05 12:45:58,776 | INFO     | architecture information:
[2025-06-05 08:46:17] 2025-06-05 12:45:58,777 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:46:17] 2025-06-05 12:45:58,790 | INFO     | cat /etc/os-release:
[2025-06-05 08:46:17] NAME="CentOS Linux"
[2025-06-05 08:46:17] VERSION="7 (Core)"
[2025-06-05 08:46:17] ID="centos"
[2025-06-05 08:46:17] ID_LIKE="rhel fedora"
[2025-06-05 08:46:17] VERSION_ID="7"
[2025-06-05 08:46:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:46:17] ANSI_COLOR="0;31"
[2025-06-05 08:46:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:46:17] HOME_URL="https://www.centos.org/"
[2025-06-05 08:46:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:46:17] 
[2025-06-05 08:46:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:46:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:46:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:46:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:46:17] 
[2025-06-05 08:46:17] 2025-06-05 12:45:58,790 | INFO     | **************************************
[2025-06-05 08:46:17] 2025-06-05 12:45:59,293 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:46:17] 2025-06-05 12:45:59,305 | INFO     | sufficient remaining disk space (76542902272 B)
[2025-06-05 08:46:17] 2025-06-05 12:45:59,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:46:17] 2025-06-05 12:45:59,305 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:46:17] 2025-06-05 12:45:59,305 | INFO     | update_server=False
[2025-06-05 08:46:17] 2025-06-05 12:45:59,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:46:17] 2025-06-05 12:45:59,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:46:17] 2025-06-05 12:45:59,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:46:17] 2025-06-05 12:45:59,306 | INFO     | aborting loop
[2025-06-05 08:46:17] 2025-06-05 12:45:59,306 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:46:17] 2025-06-05 12:45:59,307 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:46:17] 2025-06-05 12:45:59,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:46:17] 2025-06-05 12:45:59,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:46:17] 2025-06-05 12:45:59,565 | INFO     | all data control threads have been joined
[2025-06-05 08:46:17] 2025-06-05 12:46:00,275 | INFO     | all job control threads have been joined
[2025-06-05 08:46:17] 2025-06-05 12:46:00,310 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:00,311 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:00,317 | INFO     | [job] validate thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:00,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:46:17] 2025-06-05 12:46:00,422 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:00,570 | INFO     | [data] control thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:00,738 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:00,763 | INFO     | all payload control threads have been joined
[2025-06-05 08:46:17] 2025-06-05 12:46:00,959 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:01,280 | INFO     | [job] control thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:01,738 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:01,768 | INFO     | [payload] control thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:01,773 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:01,782 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:02,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:46:17] 2025-06-05 12:46:02,407 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:03,235 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:03,312 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:09,827 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:46:17] 2025-06-05 12:46:10,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:46:17] 2025-06-05 12:46:12,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651794147136)>', '<ExcThread(monitor, started 139651297818368)>']
[2025-06-05 08:46:17] 2025-06-05 12:46:13,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:46:17] 2025-06-05 12:46:13,378 | INFO     | [monitor] control thread has ended
[2025-06-05 08:46:17] 2025-06-05 12:46:17,631 | INFO     | all workflow threads have been joined
[2025-06-05 08:46:17] 2025-06-05 12:46:17,631 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:46:17] 2025-06-05 12:46:17,632 | INFO     | traces error code: 0
[2025-06-05 08:46:17] 2025-06-05 12:46:17,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:46:17] 2025-06-05 12:46:17,813 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:46:17] 2025-06-05 12:46:17,815 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:46:17] 2025-06-05 12:46:17,818 [wrapper] pilotpid: 3977810
[2025-06-05 08:46:17] 2025-06-05 12:46:17,821 [wrapper] Pilot exit status: 0
[2025-06-05 08:46:17] 2025-06-05 12:46:17,832 [wrapper] pandaids: 6668688111
[2025-06-05 08:46:17] 2025-06-05 12:46:17,888 [wrapper] cleanup supervisor_pilot 4170231 3977811
[2025-06-05 08:46:17] 2025-06-05 12:46:17,892 [wrapper] Test setup, not cleaning
[2025-06-05 08:46:17] 2025-06-05 12:46:17,895 [wrapper] apfmon messages muted
[2025-06-05 08:46:17] 2025-06-05 12:46:17,898 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:46:17] 2025-06-05 12:46:17,902 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:46:17]  *** Error codes and diagnostics ***
[2025-06-05 08:46:17]     "exeErrorCode": 0,
[2025-06-05 08:46:17]     "exeErrorDiag": "",
[2025-06-05 08:46:17]     "pilotErrorCode": 0,
[2025-06-05 08:46:17]     "pilotErrorDiag": "",
[2025-06-05 08:46:17]  *** Listing of results directory ***
[2025-06-05 08:46:17] total 422244
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas      5111 May 28 12:08 queuedata.json
[2025-06-05 08:46:17] -rwx------. 1 boincer umatlas     37140 May 28 12:09 runpilot2-wrapper.sh
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas       100 Jun  5 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:46:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 07:08 run_atlas
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas       105 Jun  5 07:08 job.xml
[2025-06-05 08:46:17] -rw-r--r--. 2 boincer umatlas 226113912 Jun  5 07:08 EVNT.44871834._003380.pool.root.1
[2025-06-05 08:46:17] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 07:08 input.tar.gz
[2025-06-05 08:46:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:08 start_atlas.sh
[2025-06-05 08:46:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 07:08 shared
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas         0 Jun  5 07:08 boinc_lockfile
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 07:08 pandaJob.out
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas    982836 Jun  5 07:09 agis_schedconf.cvmfs.json
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas   1598969 Jun  5 07:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:46:17] drwx------. 4 boincer umatlas      4096 Jun  5 07:09 pilot3
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas 200588856 Jun  5 08:45 HITS.44871837._086799.pool.root.1
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 08:45 init_data.xml
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas       529 Jun  5 08:45 boinc_task_state.xml
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas      1036 Jun  5 08:45 memory_monitor_summary.json
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas        95 Jun  5 08:45 pilot_heartbeat.json
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas    392125 Jun  5 08:45 log.44871837._086799.job.log.tgz.1
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas      7718 Jun  5 08:45 heartbeat.json
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 08:46 boinc_mmap_file
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas        27 Jun  5 08:46 wrapper_checkpoint.txt
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas      4548 Jun  5 08:46 pilotlog.txt
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas    535210 Jun  5 08:46 log.44871837._086799.job.log.1
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas       357 Jun  5 08:46 output.list
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas       620 Jun  5 08:46 runtime_log
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas    942080 Jun  5 08:46 result.tar.gz
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 08:46 runtime_log.err
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas       654 Jun  5 08:46 BspKDmLWYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOYcKDmASPdHn.diag
[2025-06-05 08:46:17] -rw-r--r--. 1 boincer umatlas     21226 Jun  5 08:46 stderr.txt
[2025-06-05 08:46:17] HITS file was successfully produced:
[2025-06-05 08:46:17] -rw-------. 1 boincer umatlas 200588856 Jun  5 08:45 shared/HITS.pool.root.1
[2025-06-05 08:46:17]  *** Contents of shared directory: ***
[2025-06-05 08:46:18] total 418148
[2025-06-05 08:46:18] -rw-r--r--. 2 boincer umatlas 226113912 Jun  5 07:08 ATLAS.root_0
[2025-06-05 08:46:18] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 07:08 input.tar.gz
[2025-06-05 08:46:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 07:08 start_atlas.sh
[2025-06-05 08:46:18] -rw-------. 1 boincer umatlas 200588856 Jun  5 08:45 HITS.pool.root.1
[2025-06-05 08:46:18] -rw-------. 1 boincer umatlas    942080 Jun  5 08:46 result.tar.gz
08:46:19 (3974244): run_atlas exited; CPU time 49584.528194
08:46:19 (3974244): called boinc_finish(0)

</stderr_txt>
]]>

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