Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:41 (10251): wrapper (7.7.26015): starting
20:06:41 (10251): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 20:06:41] Arguments: --nthreads 8
[2025-06-05 20:06:41] Threads: 8
[2025-06-05 20:06:41] Checking for CVMFS
[2025-06-05 20:06:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 20:06:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 20:06:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 20:06:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 20:06:42] 2.11.2.0 28641 35001 91896 146827 1 159 21136434 25165825 4017 130560 0 19352433 99.823 20864243 2050 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 20:06:42] CVMFS is ok
[2025-06-05 20:06:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:06:42] Checking for apptainer binary...
[2025-06-05 20:06:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 20:06:42] Running /usr/bin/apptainer --version
[2025-06-05 20:06:42] apptainer version 1.3.2-1.el7
[2025-06-05 20:06:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:06:44] cg-vwn402.simple-grid.lan
[2025-06-05 20:06:44] apptainer works
[2025-06-05 20:06:44] Set ATHENA_PROC_NUMBER=8
[2025-06-05 20:06:44] Set ATHENA_CORE_NUMBER=8
[2025-06-05 20:06:44] Starting ATLAS job with PandaID=6665733916
[2025-06-05 20:06:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:03:28]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:03:29] 2025-06-05 23:07:27,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:03:29] 2025-06-05 23:07:27,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:03:29] 2025-06-05 23:07:27,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:03:29] 2025-06-05 23:07:27,770 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:03:29] 2025-06-05 23:07:27,771 | INFO     | sum of square deviations: 7799669962.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,774 | INFO     | sum of deviations: 42540396062.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,774 | INFO     | mean x: 1749155824.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,774 | INFO     | mean y: 2472599.5631399318
[2025-06-06 04:03:29] 2025-06-05 23:07:27,774 | INFO     | -- intersect: -9537646647.743284
[2025-06-06 04:03:29] 2025-06-05 23:07:27,774 | INFO     | intersect: -9537646647.743284
[2025-06-06 04:03:29] 2025-06-05 23:07:27,775 | INFO     | chi2: 2.616971604625385
[2025-06-06 04:03:29] 2025-06-05 23:07:27,775 | INFO     | sum of square deviations: 7407141672.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,778 | INFO     | sum of deviations: 60956076492.5
[2025-06-06 04:03:29] 2025-06-05 23:07:27,778 | INFO     | mean x: 1749155671.5
[2025-06-06 04:03:29] 2025-06-05 23:07:27,778 | INFO     | mean y: 2479649.8506944445
[2025-06-06 04:03:29] 2025-06-05 23:07:27,778 | INFO     | -- intersect: -14391961773.119326
[2025-06-06 04:03:29] 2025-06-05 23:07:27,779 | INFO     | intersect: -14391961773.119326
[2025-06-06 04:03:29] 2025-06-05 23:07:27,779 | INFO     | chi2: 1.8470978128500914
[2025-06-06 04:03:29] 2025-06-05 23:07:27,779 | INFO     | current chi2=1.8470978128500914 (change=29.4185000102628 %)
[2025-06-06 04:03:29] 2025-06-05 23:07:27,780 | INFO     | sum of square deviations: 7028008982.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,782 | INFO     | sum of deviations: 59645582046.99999
[2025-06-06 04:03:29] 2025-06-05 23:07:27,782 | INFO     | mean x: 1749155519.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,782 | INFO     | mean y: 2479122.664310954
[2025-06-06 04:03:29] 2025-06-05 23:07:27,783 | INFO     | -- intersect: -14842322483.122446
[2025-06-06 04:03:29] 2025-06-05 23:07:27,783 | INFO     | intersect: -14842322483.122446
[2025-06-06 04:03:29] 2025-06-05 23:07:27,783 | INFO     | chi2: 1.8476909714863297
[2025-06-06 04:03:29] 2025-06-05 23:07:27,783 | INFO     | current chi2=1.8476909714863297 (change=-0.03211300625834001 %)
[2025-06-06 04:03:29] 2025-06-05 23:07:27,783 | INFO     | right removable region: 282
[2025-06-06 04:03:29] 2025-06-05 23:07:27,784 | INFO     | sum of square deviations: 7407141672.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,786 | INFO     | sum of deviations: -12875238524.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,786 | INFO     | mean x: 1749155976.5
[2025-06-06 04:03:29] 2025-06-05 23:07:27,787 | INFO     | mean y: 2493999.027777778
[2025-06-06 04:03:29] 2025-06-05 23:07:27,787 | INFO     | -- intersect: 3042911127.574045
[2025-06-06 04:03:29] 2025-06-05 23:07:27,787 | INFO     | intersect: 3042911127.574045
[2025-06-06 04:03:29] 2025-06-05 23:07:27,787 | INFO     | chi2: 0.8225197593892464
[2025-06-06 04:03:29] 2025-06-05 23:07:27,787 | INFO     | current chi2=0.8225197593892464 (change=68.569786621472 %)
[2025-06-06 04:03:29] 2025-06-05 23:07:27,788 | INFO     | sum of square deviations: 7028008982.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,790 | INFO     | sum of deviations: -18838644152.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,791 | INFO     | mean x: 1749156129.0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,791 | INFO     | mean y: 2496404.519434629
[2025-06-06 04:03:29] 2025-06-05 23:07:27,791 | INFO     | -- intersect: 4691125853.473775
[2025-06-06 04:03:29] 2025-06-05 23:07:27,791 | INFO     | intersect: 4691125853.473775
[2025-06-06 04:03:29] 2025-06-05 23:07:27,791 | INFO     | chi2: 0.7942903572029487
[2025-06-06 04:03:29] 2025-06-05 23:07:27,791 | INFO     | current chi2=0.7942903572029487 (change=3.4320637120327797 %)
[2025-06-06 04:03:29] 2025-06-05 23:07:27,791 | INFO     | left removable region: 20
[2025-06-06 04:03:29] 2025-06-05 23:07:27,792 | INFO     | sum of square deviations: 5576683165.5
[2025-06-06 04:03:29] 2025-06-05 23:07:27,794 | INFO     | sum of deviations: -2377589558.0000005
[2025-06-06 04:03:29] 2025-06-05 23:07:27,794 | INFO     | mean x: 1749156098.5
[2025-06-06 04:03:29] 2025-06-05 23:07:27,794 | INFO     | mean y: 2504964.6641221372
[2025-06-06 04:03:29] 2025-06-05 23:07:27,794 | INFO     | -- intersect: 748248474.1454875
[2025-06-06 04:03:29] 2025-06-05 23:07:27,794 | INFO     | intersect: 748248474.1454875
[2025-06-06 04:03:29] 2025-06-05 23:07:27,795 | INFO     | chi2: 0.005260725636386562
[2025-06-06 04:03:29] 2025-06-05 23:07:27,795 | INFO     | -- intersect: 748248474.1454875
[2025-06-06 04:03:29] 2025-06-05 23:07:27,795 | INFO     | current memory leak: -0.43 B/s (using 262 data points, chi2=0.01)
[2025-06-06 04:03:29] 2025-06-05 23:07:27,796 | INFO     | ..............................
[2025-06-06 04:03:29] 2025-06-05 23:07:27,796 | INFO     | . Timing measurements:
[2025-06-06 04:03:29] 2025-06-05 23:07:27,796 | INFO     | . get job = 0 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,797 | INFO     | . initial setup = 3 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,797 | INFO     | . payload setup = 18 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,797 | INFO     | . stage-in = 0 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,797 | INFO     | . payload execution = 17864 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,797 | INFO     | . stage-out = 4 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,797 | INFO     | . log creation = 1 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,797 | INFO     | ..............................
[2025-06-06 04:03:29] 2025-06-05 23:07:27,931 | INFO     | 
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | job summary report
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | --------------------------------------------------
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | PanDA job id: 6665733916
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | task id: 44871837
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | errors: (none)
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | pilot state: finished 
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | transexitcode: 0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | exeerrorcode: 0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | exeerrordiag: 
[2025-06-06 04:03:29] 2025-06-05 23:07:27,932 | INFO     | exitcode: 0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | exitmsg: OK
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | cpuconsumptiontime: 68175 s
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | nevents: 400
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | neventsw: 0
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | pid: 22736
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | pgrp: 22736
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | corecount: 8
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | event service: False
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 13: 2397710, 23: 2397710, 17887: 2429417, 17892: 2438358, 17893: 2438414, 17979: 2438584}
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | --------------------------------------------------
[2025-06-06 04:03:29] 2025-06-05 23:07:27,933 | INFO     | 
[2025-06-06 04:03:29] 2025-06-05 23:07:27,934 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-06 04:03:29] 2025-06-05 23:07:28,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,555 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:03:29] 2025-06-05 23:07:28,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,555 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:03:29] 2025-06-05 23:07:28,555 | INFO     | job 6665733916 has completed (purged errors)
[2025-06-06 04:03:29] 2025-06-05 23:07:28,555 | INFO     | overall cleanup function is called
[2025-06-06 04:03:29] 2025-06-05 23:07:29,565 | INFO     | --- collectZombieJob: --- 10, [22736]
[2025-06-06 04:03:29] 2025-06-05 23:07:29,565 | INFO     | zombie collector waiting for pid 22736
[2025-06-06 04:03:29] 2025-06-05 23:07:29,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:03:29] 2025-06-05 23:07:29,566 | INFO     | collected zombie processes
[2025-06-06 04:03:29] 2025-06-05 23:07:29,566 | INFO     | will attempt to kill all subprocesses of pid=22736
[2025-06-06 04:03:29] 2025-06-05 23:07:29,674 | INFO     | process IDs to be killed: [22736] (in reverse order)
[2025-06-06 04:03:29] 2025-06-05 23:07:30,405 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:03:29] 2025-06-05 23:07:30,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:03:29] 2025-06-05 23:07:30,409 | INFO     | did not find any defunct processes belonging to 22736
[2025-06-06 04:03:29] 2025-06-05 23:07:30,413 | INFO     | did not find any defunct processes belonging to 22736
[2025-06-06 04:03:29] 2025-06-05 23:07:30,413 | INFO     | ready for new job
[2025-06-06 04:03:29] 2025-06-05 23:07:30,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:03:29] 2025-06-05 23:07:30,416 | INFO     | **************************************
[2025-06-06 04:03:29] 2025-06-05 23:07:30,416 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:03:29] 2025-06-05 23:07:30,416 | INFO     | **************************************
[2025-06-06 04:03:29] 2025-06-05 23:07:30,416 | INFO     | 
[2025-06-06 04:03:29] 2025-06-05 23:07:30,417 | INFO     | pilot is running in a VM
[2025-06-06 04:03:29] 2025-06-05 23:07:30,417 | INFO     | architecture information:
[2025-06-06 04:03:29] 2025-06-05 23:07:30,425 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:03:29] 2025-06-05 23:07:30,567 | INFO     | cat /etc/os-release:
[2025-06-06 04:03:29] NAME="CentOS Linux"
[2025-06-06 04:03:29] VERSION="7 (Core)"
[2025-06-06 04:03:29] ID="centos"
[2025-06-06 04:03:29] ID_LIKE="rhel fedora"
[2025-06-06 04:03:29] VERSION_ID="7"
[2025-06-06 04:03:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:03:29] ANSI_COLOR="0;31"
[2025-06-06 04:03:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:03:29] HOME_URL="https://www.centos.org/"
[2025-06-06 04:03:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:03:29] 
[2025-06-06 04:03:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:03:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:03:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:03:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:03:29] 
[2025-06-06 04:03:29] 2025-06-05 23:07:30,568 | INFO     | **************************************
[2025-06-06 04:03:29] 2025-06-05 23:07:31,075 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-06 04:03:29] 2025-06-05 23:07:31,367 | INFO     | sufficient remaining disk space (496564699136 B)
[2025-06-06 04:03:29] 2025-06-05 23:07:31,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:03:29] 2025-06-05 23:07:31,367 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:03:29] 2025-06-05 23:07:31,368 | INFO     | update_server=False
[2025-06-06 04:03:29] 2025-06-05 23:07:31,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:03:29] 2025-06-05 23:07:31,369 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 04:03:29] 2025-06-05 23:07:31,370 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:03:29] 2025-06-05 23:07:31,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:03:29] 2025-06-05 23:07:31,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:03:29] 2025-06-05 23:07:31,504 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 04:03:29] 2025-06-05 23:07:31,504 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 04:03:29] 2025-06-05 23:07:31,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:03:29] 2025-06-05 23:07:31,505 | INFO     | will abort loop
[2025-06-06 04:03:29] 2025-06-05 23:07:31,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:03:29] 2025-06-05 23:07:32,090 | INFO     | all data control threads have been joined
[2025-06-06 04:03:29] 2025-06-05 23:07:32,375 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:32,379 | INFO     | all payload control threads have been joined
[2025-06-06 04:03:29] 2025-06-05 23:07:32,420 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:32,486 | INFO     | all job control threads have been joined
[2025-06-06 04:03:29] 2025-06-05 23:07:32,512 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:32,522 | INFO     | [job] validate thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:32,582 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:32,699 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:32,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:03:29] 2025-06-05 23:07:33,041 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,096 | INFO     | [data] control thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,389 | INFO     | [payload] control thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,394 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,492 | INFO     | [job] control thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,749 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,853 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,951 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:33,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:03:29] 2025-06-05 23:07:37,979 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:03:29] 2025-06-05 23:07:39,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934329665344)>', '<ExcThread(monitor, started 139934027462400)>']
[2025-06-06 04:03:29] 2025-06-05 23:07:39,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:03:29] 2025-06-05 23:07:39,417 | INFO     | [monitor] control thread has ended
[2025-06-06 04:03:29] 2025-06-05 23:07:44,067 | INFO     | all workflow threads have been joined
[2025-06-06 04:03:29] 2025-06-05 23:07:44,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:03:29] 2025-06-05 23:07:44,068 | INFO     | traces error code: 0
[2025-06-06 04:03:29] 2025-06-05 23:07:44,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:03:29] 2025-06-05 23:07:44,537 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:03:29] 2025-06-05 23:07:44,597 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:03:29] 2025-06-05 23:07:44,691 [wrapper] pilotpid: 14510
[2025-06-06 04:03:29] 2025-06-05 23:07:44,793 [wrapper] Pilot exit status: 0
[2025-06-06 04:03:29] 2025-06-05 23:07:45,314 [wrapper] pandaids: 6665733916
[2025-06-06 04:03:29] 2025-06-05 23:07:46,191 [wrapper] cleanup supervisor_pilot  7126 14511
[2025-06-06 04:03:29] 2025-06-05 23:07:46,278 [wrapper] Test setup, not cleaning
[2025-06-06 04:03:29] 2025-06-05 23:07:46,321 [wrapper] apfmon messages muted
[2025-06-06 04:03:29] 2025-06-05 23:07:46,427 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:03:29] 2025-06-05 23:07:46,516 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:03:29]  *** Error codes and diagnostics ***
[2025-06-06 04:03:29]     "exeErrorCode": 0,
[2025-06-06 04:03:29]     "exeErrorDiag": "",
[2025-06-06 04:03:29]     "pilotErrorCode": 0,
[2025-06-06 04:03:29]     "pilotErrorDiag": "",
[2025-06-06 04:03:29]  *** Listing of results directory ***
[2025-06-06 04:03:29] total 416232
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc    495897 May 25 17:56 pilot3.tar.gz
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc      5111 May 25 17:59 queuedata.json
[2025-06-06 04:03:29] -rwx------. 1 boinc boinc     37140 May 25 18:01 runpilot2-wrapper.sh
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc       100 Jun  5 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:03:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 20:06 run_atlas
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc       105 Jun  5 20:06 job.xml
[2025-06-06 04:03:29] -rw-r--r--. 2 boinc boinc 225140096 Jun  5 20:06 EVNT.44871834._001477.pool.root.1
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc      6390 Jun  5 20:06 init_data.xml
[2025-06-06 04:03:29] -rw-r--r--. 2 boinc boinc     15093 Jun  5 20:06 start_atlas.sh
[2025-06-06 04:03:29] drwxrwx--x. 2 boinc boinc        68 Jun  5 20:06 shared
[2025-06-06 04:03:29] -rw-r--r--. 2 boinc boinc    508881 Jun  5 20:06 input.tar.gz
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc         0 Jun  5 20:06 boinc_lockfile
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc      2559 Jun  5 20:06 pandaJob.out
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc    983229 Jun  5 20:07 agis_schedconf.cvmfs.json
[2025-06-06 04:03:29] drwx------. 4 boinc boinc      4096 Jun  5 20:07 pilot3
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc 193350626 Jun  6 01:04 HITS.44871837._037033.pool.root.1
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc       531 Jun  6 01:04 boinc_task_state.xml
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc      1015 Jun  6 01:05 memory_monitor_summary.json
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc   1598969 Jun  6 01:05 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc    419470 Jun  6 01:05 log.44871837._037033.job.log.tgz.1
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc        95 Jun  6 01:07 pilot_heartbeat.json
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc      7685 Jun  6 01:07 heartbeat.json
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc      4725 Jun  6 01:07 pilotlog.txt
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc   1539915 Jun  6 01:07 log.44871837._037033.job.log.1
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc       357 Jun  6 01:07 output.list
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc       620 Jun  6 01:07 runtime_log
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc   1976320 Jun  6 01:07 result.tar.gz
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc       657 Jun  6 01:07 xUNMDmgxSd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7kOKDmcHeM1n.diag
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc      8659 Jun  6 01:07 runtime_log.err
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc      8192 Jun  6 04:03 boinc_mmap_file
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc        28 Jun  6 04:03 wrapper_checkpoint.txt
[2025-06-06 04:03:29] -rw-r--r--. 1 boinc boinc     20499 Jun  6 04:03 stderr.txt
[2025-06-06 04:03:29] HITS file was successfully produced:
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc 193350626 Jun  6 01:04 shared/HITS.pool.root.1
[2025-06-06 04:03:29]  *** Contents of shared directory: ***
[2025-06-06 04:03:29] total 411132
[2025-06-06 04:03:29] -rw-r--r--. 2 boinc boinc 225140096 Jun  5 20:06 ATLAS.root_0
[2025-06-06 04:03:29] -rw-r--r--. 2 boinc boinc     15093 Jun  5 20:06 start_atlas.sh
[2025-06-06 04:03:29] -rw-r--r--. 2 boinc boinc    508881 Jun  5 20:06 input.tar.gz
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc 193350626 Jun  6 01:04 HITS.pool.root.1
[2025-06-06 04:03:29] -rw-------. 1 boinc boinc   1976320 Jun  6 01:07 result.tar.gz
04:03:30 (10251): run_atlas exited; CPU time 68394.558302
04:03:30 (10251): called boinc_finish(0)

</stderr_txt>
]]>

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