Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:11 (19346): wrapper (7.7.26015): starting
12:52:11 (19346): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 12:52:11] Arguments: --nthreads 8
[2025-06-05 12:52:11] Threads: 8
[2025-06-05 12:52:11] Checking for CVMFS
[2025-06-05 12:52:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:52:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:52:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:52:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:52:14] 2.11.2.0 20077 34718 92080 146816 0 16 19932794 25165825 3519 130560 0 17612702 99.769 19610843 1987 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 12:52:14] CVMFS is ok
[2025-06-05 12:52:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:52:14] Checking for apptainer binary...
[2025-06-05 12:52:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:52:14] Running /usr/bin/apptainer --version
[2025-06-05 12:52:15] apptainer version 1.3.2-1.el7
[2025-06-05 12:52:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:53:26] cg-vwn315.simple-grid.lan
[2025-06-05 13:53:26] apptainer works
[2025-06-05 13:53:26] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:53:26] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:53:26] Starting ATLAS job with PandaID=6668044082
[2025-06-05 13:53:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:06:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:06:04] 2025-06-05 17:27:29,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:06:04] 2025-06-05 17:27:29,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:06:04] 2025-06-05 17:27:29,602 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:06:04] 2025-06-05 17:27:29,603 | INFO     | sum of square deviations: 9784425315.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,606 | INFO     | sum of deviations: 164823602988.5
[2025-06-05 21:06:04] 2025-06-05 17:27:29,606 | INFO     | mean x: 1749134711.5
[2025-06-05 21:06:04] 2025-06-05 17:27:29,606 | INFO     | mean y: 2443766.8765822784
[2025-06-05 21:06:04] 2025-06-05 17:27:29,606 | INFO     | -- intersect: -29462616875.949783
[2025-06-05 21:06:04] 2025-06-05 17:27:29,607 | INFO     | intersect: -29462616875.949783
[2025-06-05 21:06:04] 2025-06-05 17:27:29,607 | INFO     | chi2: 6.952268849315625
[2025-06-05 21:06:04] 2025-06-05 17:27:29,608 | INFO     | sum of square deviations: 9327281860.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,615 | INFO     | sum of deviations: 182853795016.99997
[2025-06-05 21:06:04] 2025-06-05 17:27:29,615 | INFO     | mean x: 1749134559.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,615 | INFO     | mean y: 2449691.9356913185
[2025-06-05 21:06:04] 2025-06-05 17:27:29,616 | INFO     | -- intersect: -34287914522.33248
[2025-06-05 21:06:04] 2025-06-05 17:27:29,616 | INFO     | intersect: -34287914522.33248
[2025-06-05 21:06:04] 2025-06-05 17:27:29,616 | INFO     | chi2: 6.222309395201457
[2025-06-05 21:06:04] 2025-06-05 17:27:29,616 | INFO     | current chi2=6.222309395201457 (change=10.499586105419732 %)
[2025-06-05 21:06:04] 2025-06-05 17:27:29,616 | INFO     | right removable region: 310
[2025-06-05 21:06:04] 2025-06-05 17:27:29,617 | INFO     | sum of square deviations: 9327281860.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,620 | INFO     | sum of deviations: 56118408571.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,620 | INFO     | mean x: 1749134864.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,620 | INFO     | mean y: 2480003.707395498
[2025-06-05 21:06:04] 2025-06-05 17:27:29,620 | INFO     | -- intersect: -10521343165.471767
[2025-06-05 21:06:04] 2025-06-05 17:27:29,620 | INFO     | intersect: -10521343165.471767
[2025-06-05 21:06:04] 2025-06-05 17:27:29,621 | INFO     | chi2: 2.3295081547146044
[2025-06-05 21:06:04] 2025-06-05 17:27:29,621 | INFO     | current chi2=2.3295081547146044 (change=66.49283557347012 %)
[2025-06-05 21:06:04] 2025-06-05 17:27:29,621 | INFO     | sum of square deviations: 8884603792.5
[2025-06-05 21:06:04] 2025-06-05 17:27:29,624 | INFO     | sum of deviations: -1581958933.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,625 | INFO     | mean x: 1749135016.5
[2025-06-05 21:06:04] 2025-06-05 17:27:29,629 | INFO     | mean y: 2499815.0261437907
[2025-06-05 21:06:04] 2025-06-05 17:27:29,629 | INFO     | -- intersect: 313944177.5435934
[2025-06-05 21:06:04] 2025-06-05 17:27:29,629 | INFO     | intersect: 313944177.5435934
[2025-06-05 21:06:04] 2025-06-05 17:27:29,630 | INFO     | chi2: 0.953001962273013
[2025-06-05 21:06:04] 2025-06-05 17:27:29,630 | INFO     | current chi2=0.953001962273013 (change=59.08999243706153 %)
[2025-06-05 21:06:04] 2025-06-05 17:27:29,631 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,633 | INFO     | sum of deviations: -17107931594.999996
[2025-06-05 21:06:04] 2025-06-05 17:27:29,634 | INFO     | mean x: 1749135169.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,634 | INFO     | mean y: 2505336.0299003324
[2025-06-05 21:06:04] 2025-06-05 17:27:29,634 | INFO     | -- intersect: 3541238041.2794676
[2025-06-05 21:06:04] 2025-06-05 17:27:29,634 | INFO     | intersect: 3541238041.2794676
[2025-06-05 21:06:04] 2025-06-05 17:27:29,634 | INFO     | chi2: 0.8613260471463371
[2025-06-05 21:06:04] 2025-06-05 17:27:29,635 | INFO     | current chi2=0.8613260471463371 (change=9.61969846400095 %)
[2025-06-05 21:06:04] 2025-06-05 17:27:29,635 | INFO     | left removable region: 30
[2025-06-05 21:06:04] 2025-06-05 17:27:29,635 | INFO     | sum of square deviations: 6806862510.0
[2025-06-05 21:06:04] 2025-06-05 17:27:29,638 | INFO     | sum of deviations: -8363697830.499991
[2025-06-05 21:06:04] 2025-06-05 17:27:29,638 | INFO     | mean x: 1749135443.5
[2025-06-05 21:06:04] 2025-06-05 17:27:29,638 | INFO     | mean y: 2516848.5464285715
[2025-06-05 21:06:04] 2025-06-05 17:27:29,638 | INFO     | -- intersect: 2151706771.5924273
[2025-06-05 21:06:04] 2025-06-05 17:27:29,638 | INFO     | intersect: 2151706771.5924273
[2025-06-05 21:06:04] 2025-06-05 17:27:29,639 | INFO     | chi2: 0.01413105670425383
[2025-06-05 21:06:04] 2025-06-05 17:27:29,639 | INFO     | -- intersect: 2151706771.5924273
[2025-06-05 21:06:04] 2025-06-05 17:27:29,639 | INFO     | current memory leak: -1.23 B/s (using 280 data points, chi2=0.01)
[2025-06-05 21:06:04] 2025-06-05 17:27:29,640 | INFO     | ..............................
[2025-06-05 21:06:04] 2025-06-05 17:27:29,640 | INFO     | . Timing measurements:
[2025-06-05 21:06:04] 2025-06-05 17:27:29,640 | INFO     | . get job = 0 s
[2025-06-05 21:06:04] 2025-06-05 17:27:29,640 | INFO     | . initial setup = 11 s
[2025-06-05 21:06:04] 2025-06-05 17:27:29,640 | INFO     | . payload setup = 159 s
[2025-06-05 21:06:04] 2025-06-05 17:27:29,641 | INFO     | . stage-in = 0 s
[2025-06-05 21:06:04] 2025-06-05 17:27:29,641 | INFO     | . payload execution = 19399 s
[2025-06-05 21:06:04] 2025-06-05 17:27:29,641 | INFO     | . stage-out = 3 s
[2025-06-05 21:06:04] 2025-06-05 17:27:29,641 | INFO     | . log creation = 0 s
[2025-06-05 21:06:04] 2025-06-05 17:27:29,641 | INFO     | ..............................
[2025-06-05 21:06:04] 2025-06-05 17:27:30,020 | INFO     | 
[2025-06-05 21:06:04] 2025-06-05 17:27:30,020 | INFO     | job summary report
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | --------------------------------------------------
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | PanDA job id: 6668044082
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | task id: 44871837
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | errors: (none)
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | pilot state: finished 
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | transexitcode: 0
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | exeerrorcode: 0
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | exeerrordiag: 
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | exitcode: 0
[2025-06-05 21:06:04] 2025-06-05 17:27:30,021 | INFO     | exitmsg: OK
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | cpuconsumptiontime: 72422 s
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | nevents: 400
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | neventsw: 0
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | pid: 839
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | pgrp: 839
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | corecount: 8
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | event service: False
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | sizes: {0: 2397222, 1: 2397421, 12: 2397421, 23: 2397449, 34: 2397477, 44: 2397505, 55: 2397661, 66: 2397689, 77: 2397717, 87: 2397773, 90: 2398007, 98: 2398315, 1
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | --------------------------------------------------
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | 
[2025-06-05 21:06:04] 2025-06-05 17:27:30,022 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-05 21:06:04] 2025-06-05 17:27:30,283 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,284 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,284 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,284 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,285 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:06:04] 2025-06-05 17:27:30,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,286 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:06:04] 2025-06-05 17:27:30,286 | INFO     | job 6668044082 has completed (purged errors)
[2025-06-05 21:06:04] 2025-06-05 17:27:30,286 | INFO     | overall cleanup function is called
[2025-06-05 21:06:04] 2025-06-05 17:27:30,986 | INFO     | 19857s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 21:06:04] 2025-06-05 17:27:31,295 | INFO     | --- collectZombieJob: --- 10, [839]
[2025-06-05 21:06:04] 2025-06-05 17:27:31,296 | INFO     | zombie collector waiting for pid 839
[2025-06-05 21:06:04] 2025-06-05 17:27:31,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:06:04] 2025-06-05 17:27:31,296 | INFO     | collected zombie processes
[2025-06-05 21:06:04] 2025-06-05 17:27:31,296 | INFO     | will attempt to kill all subprocesses of pid=839
[2025-06-05 21:06:04] 2025-06-05 17:27:31,396 | INFO     | process IDs to be killed: [839] (in reverse order)
[2025-06-05 21:06:04] 2025-06-05 17:27:31,471 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:06:04] 2025-06-05 17:27:31,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:06:04] 2025-06-05 17:27:31,477 | INFO     | did not find any defunct processes belonging to 839
[2025-06-05 21:06:04] 2025-06-05 17:27:31,482 | INFO     | did not find any defunct processes belonging to 839
[2025-06-05 21:06:04] 2025-06-05 17:27:31,483 | INFO     | ready for new job
[2025-06-05 21:06:04] 2025-06-05 17:27:31,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:06:04] 2025-06-05 17:27:31,486 | INFO     | **************************************
[2025-06-05 21:06:04] 2025-06-05 17:27:31,487 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:06:04] 2025-06-05 17:27:31,487 | INFO     | **************************************
[2025-06-05 21:06:04] 2025-06-05 17:27:31,487 | INFO     | 
[2025-06-05 21:06:04] 2025-06-05 17:27:31,488 | INFO     | pilot is running in a VM
[2025-06-05 21:06:04] 2025-06-05 17:27:31,488 | INFO     | architecture information:
[2025-06-05 21:06:04] 2025-06-05 17:27:31,488 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:06:04] 2025-06-05 17:27:31,553 | INFO     | cat /etc/os-release:
[2025-06-05 21:06:04] NAME="CentOS Linux"
[2025-06-05 21:06:04] VERSION="7 (Core)"
[2025-06-05 21:06:04] ID="centos"
[2025-06-05 21:06:04] ID_LIKE="rhel fedora"
[2025-06-05 21:06:04] VERSION_ID="7"
[2025-06-05 21:06:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:06:04] ANSI_COLOR="0;31"
[2025-06-05 21:06:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:06:04] HOME_URL="https://www.centos.org/"
[2025-06-05 21:06:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:06:04] 
[2025-06-05 21:06:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:06:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:06:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:06:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:06:04] 
[2025-06-05 21:06:04] 2025-06-05 17:27:31,554 | INFO     | **************************************
[2025-06-05 21:06:04] 2025-06-05 17:27:32,058 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-05 21:06:04] 2025-06-05 17:27:32,138 | INFO     | sufficient remaining disk space (496499687424 B)
[2025-06-05 21:06:04] 2025-06-05 17:27:32,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:06:04] 2025-06-05 17:27:32,139 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:06:04] 2025-06-05 17:27:32,139 | INFO     | update_server=False
[2025-06-05 21:06:04] 2025-06-05 17:27:32,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:06:04] 2025-06-05 17:27:32,140 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:06:04] 2025-06-05 17:27:32,141 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:06:04] 2025-06-05 17:27:32,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:06:04] 2025-06-05 17:27:32,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:06:04] 2025-06-05 17:27:32,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:06:04] 2025-06-05 17:27:32,391 | INFO     | all payload control threads have been joined
[2025-06-05 21:06:04] 2025-06-05 17:27:32,514 | INFO     | all data control threads have been joined
[2025-06-05 21:06:04] 2025-06-05 17:27:32,533 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 21:06:04] 2025-06-05 17:27:32,534 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 21:06:04] 2025-06-05 17:27:32,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:06:04] 2025-06-05 17:27:32,534 | INFO     | will abort loop
[2025-06-05 21:06:04] 2025-06-05 17:27:32,734 | INFO     | all job control threads have been joined
[2025-06-05 21:06:04] 2025-06-05 17:27:33,145 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:33,287 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:33,397 | INFO     | [payload] control thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:33,520 | INFO     | [data] control thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:33,539 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:33,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:06:04] 2025-06-05 17:27:33,740 | INFO     | [job] control thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:33,912 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:33,960 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:34,150 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:34,153 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:34,162 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:34,286 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:34,552 | INFO     | [job] validate thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:34,561 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:34,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:06:04] 2025-06-05 17:27:35,812 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:37,666 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:06:04] 2025-06-05 17:27:38,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171660289856)>', '<ExcThread(monitor, started 140171072755456)>']
[2025-06-05 21:06:04] 2025-06-05 17:27:39,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:06:04] 2025-06-05 17:27:39,185 | INFO     | [monitor] control thread has ended
[2025-06-05 21:06:04] 2025-06-05 17:27:43,522 | INFO     | all workflow threads have been joined
[2025-06-05 21:06:04] 2025-06-05 17:27:43,523 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:06:04] 2025-06-05 17:27:43,523 | INFO     | traces error code: 0
[2025-06-05 21:06:04] 2025-06-05 17:27:43,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:06:04] 2025-06-05 17:27:43,803 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:06:04] 2025-06-05 17:27:43,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:06:04] 2025-06-05 17:27:43,818 [wrapper] pilotpid: 24625
[2025-06-05 21:06:04] 2025-06-05 17:27:43,825 [wrapper] Pilot exit status: 0
[2025-06-05 21:06:04] 2025-06-05 17:27:43,878 [wrapper] pandaids: 6668044082
[2025-06-05 21:06:04] 2025-06-05 17:27:44,011 [wrapper] cleanup supervisor_pilot 14262 24626
[2025-06-05 21:06:04] 2025-06-05 17:27:44,129 [wrapper] Test setup, not cleaning
[2025-06-05 21:06:04] 2025-06-05 17:27:44,222 [wrapper] apfmon messages muted
[2025-06-05 21:06:04] 2025-06-05 17:27:44,292 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:06:04] 2025-06-05 17:27:44,338 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:06:04]  *** Error codes and diagnostics ***
[2025-06-05 21:06:04]     "exeErrorCode": 0,
[2025-06-05 21:06:04]     "exeErrorDiag": "",
[2025-06-05 21:06:04]     "pilotErrorCode": 0,
[2025-06-05 21:06:04]     "pilotErrorDiag": "",
[2025-06-05 21:06:04]  *** Listing of results directory ***
[2025-06-05 21:06:04] total 422688
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc    495897 May 28 06:31 pilot3.tar.gz
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc      5111 May 28 06:50 queuedata.json
[2025-06-05 21:06:04] -rwx------. 1 boinc boinc     37140 May 28 06:54 runpilot2-wrapper.sh
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc       100 Jun  5 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:06:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 12:52 run_atlas
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc       105 Jun  5 12:52 job.xml
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc      6391 Jun  5 12:52 init_data.xml
[2025-06-05 21:06:04] -rw-r--r--. 2 boinc boinc 223023266 Jun  5 12:52 EVNT.44871834._003086.pool.root.1
[2025-06-05 21:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:52 start_atlas.sh
[2025-06-05 21:06:04] drwxrwx--x. 2 boinc boinc        68 Jun  5 12:52 shared
[2025-06-05 21:06:04] -rw-r--r--. 2 boinc boinc    508881 Jun  5 12:52 input.tar.gz
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc         0 Jun  5 12:52 boinc_lockfile
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc      2559 Jun  5 13:53 pandaJob.out
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc    982836 Jun  5 13:56 agis_schedconf.cvmfs.json
[2025-06-05 21:06:04] drwx------. 4 boinc boinc      4096 Jun  5 13:56 pilot3
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc 201751165 Jun  5 19:24 HITS.44871837._078964.pool.root.1
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc       531 Jun  5 19:24 boinc_task_state.xml
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc      1018 Jun  5 19:25 memory_monitor_summary.json
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc   1598969 Jun  5 19:25 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc    438417 Jun  5 19:25 log.44871837._078964.job.log.tgz.1
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc        95 Jun  5 19:26 pilot_heartbeat.json
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc      7694 Jun  5 19:27 heartbeat.json
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc      4726 Jun  5 19:27 pilotlog.txt
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc   1681202 Jun  5 19:27 log.44871837._078964.job.log.1
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc       357 Jun  5 19:27 output.list
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc       620 Jun  5 19:27 runtime_log
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc   2140160 Jun  5 19:27 result.tar.gz
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc      8673 Jun  5 19:27 runtime_log.err
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc       657 Jun  5 19:27 BMzNDmkzNe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRwSKDmtFGYZn.diag
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc      8192 Jun  5 21:06 boinc_mmap_file
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc        28 Jun  5 21:06 wrapper_checkpoint.txt
[2025-06-05 21:06:04] -rw-r--r--. 1 boinc boinc     20562 Jun  5 21:06 stderr.txt
[2025-06-05 21:06:04] HITS file was successfully produced:
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc 201751165 Jun  5 19:24 shared/HITS.pool.root.1
[2025-06-05 21:06:04]  *** Contents of shared directory: ***
[2025-06-05 21:06:04] total 417432
[2025-06-05 21:06:04] -rw-r--r--. 2 boinc boinc 223023266 Jun  5 12:52 ATLAS.root_0
[2025-06-05 21:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:52 start_atlas.sh
[2025-06-05 21:06:04] -rw-r--r--. 2 boinc boinc    508881 Jun  5 12:52 input.tar.gz
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc 201751165 Jun  5 19:24 HITS.pool.root.1
[2025-06-05 21:06:04] -rw-------. 1 boinc boinc   2140160 Jun  5 19:27 result.tar.gz
21:06:05 (19346): run_atlas exited; CPU time 72680.651630
21:06:05 (19346): called boinc_finish(0)

</stderr_txt>
]]>

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