Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:45:25 (1010235): wrapper (7.7.26015): starting
06:45:25 (1010235): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:45:25] Arguments: --nthreads 8
[2025-06-05 06:45:25] Threads: 8
[2025-06-05 06:45:25] Checking for CVMFS
[2025-06-05 06:45:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:45:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:45:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:45:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:45:25] 2.12.6.0 54733 38513 531884 146816 2 513 25329939 32935937 17546 16776704 1 508524583 99.708 366315295 21743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 06:45:25] CVMFS is ok
[2025-06-05 06:45:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:45:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:45:25] Further information can be found at the LHC@home message board.
[2025-06-05 06:45:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:45:25] Checking for apptainer binary...
[2025-06-05 06:45:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:45:25] Running /usr/bin/apptainer --version
[2025-06-05 06:45:25] apptainer version 1.4.1-1.el9
[2025-06-05 06:45:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:45:26] c7-2-10.aglt2.org
[2025-06-05 06:45:26] apptainer works
[2025-06-05 06:45:26] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:45:26] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:45:26] Starting ATLAS job with PandaID=6668787890
[2025-06-05 06:45:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:33:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:33:21] 2025-06-05 12:33:06,335 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6668787890/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,336 | INFO     | extracted standard info from prmon json
[2025-06-05 08:33:21] 2025-06-05 12:33:06,336 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:33:21] 2025-06-05 12:33:06,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:33:21] 2025-06-05 12:33:06,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:33:21] 2025-06-05 12:33:06,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:33:21] 2025-06-05 12:33:06,338 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:33:21] 2025-06-05 12:33:06,338 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 08:33:21] 2025-06-05 12:33:06,338 | INFO     | sum of deviations: -4542799259.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | mean x: 1749123565.5
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | mean y: 2214405.2075471696
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | -- intersect: 21519459721.36602
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | intersect: 21519459721.36602
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | chi2: 2.1056684142318995
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | sum of deviations: 2165034325.999996
[2025-06-05 08:33:21] 2025-06-05 12:33:06,339 | INFO     | mean x: 1749123413.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | mean y: 2234246.6039603963
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | -- intersect: -11852321135.613413
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | intersect: -11852321135.613413
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | chi2: 1.4412239552842177
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | current chi2=1.4412239552842177 (change=31.555037557518585 %)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | sum of deviations: 2382320748.5
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | mean x: 1749123260.5
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | mean y: 2234983.03125
[2025-06-05 08:33:21] 2025-06-05 12:33:06,340 | INFO     | -- intersect: -15188390335.212511
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | intersect: -15188390335.212511
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | chi2: 1.4437700905237152
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | current chi2=1.4437700905237152 (change=-0.1766647876037715 %)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | right removable region: 95
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | sum of deviations: -17536583963.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | mean x: 1749123718.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | mean y: 2253277.881188119
[2025-06-05 08:33:21] 2025-06-05 12:33:06,341 | INFO     | -- intersect: 96023105953.46419
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | intersect: 96023105953.46419
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | chi2: 0.7612368626186535
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | current chi2=0.7612368626186535 (change=63.84820812842293 %)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | sum of deviations: -16374040503.499998
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | mean x: 1749123870.5
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | mean y: 2249313.4270833335
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | -- intersect: 104409685270.707
[2025-06-05 08:33:21] 2025-06-05 12:33:06,342 | INFO     | intersect: 104409685270.707
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | chi2: 0.7579864378360355
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | current chi2=0.7579864378360355 (change=0.42699256200449875 %)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | left removable region: 20
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | sum of square deviations: 130793150.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | sum of deviations: -6589663591.999999
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | mean x: 1749123840.0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | mean y: 2265308.84
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | -- intersect: 88127199117.27899
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | intersect: 88127199117.27899
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | chi2: 0.05586596344150693
[2025-06-05 08:33:21] 2025-06-05 12:33:06,343 | INFO     | -- intersect: 88127199117.27899
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | current memory leak: -50.38 B/s (using 75 data points, chi2=0.06)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | ..............................
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . Timing measurements:
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . get job = 0 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . initial setup = 2 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . payload setup = 6 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . stage-in = 0 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . payload execution = 6412 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . stage-out = 0 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | . log creation = 0 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,344 | INFO     | ..............................
[2025-06-05 08:33:21] 2025-06-05 12:33:06,414 | INFO     | 
[2025-06-05 08:33:21] 2025-06-05 12:33:06,414 | INFO     | job summary report
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | --------------------------------------------------
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | PanDA job id: 6668787890
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | task id: 44871837
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | errors: (none)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | pilot state: finished 
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | transexitcode: 0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | exeerrorcode: 0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | exeerrordiag: 
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | exitcode: 0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,415 | INFO     | exitmsg: OK
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | cpuconsumptiontime: 39999 s
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | nevents: 400
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | neventsw: 0
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | pid: 1049629
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | pgrp: 1049629
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | corecount: 8
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | event service: False
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 6421: 2424793, 6422: 2424792, 6423: 2433917, 6424: 2433973, 6434: 2434143}
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | --------------------------------------------------
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | 
[2025-06-05 08:33:21] 2025-06-05 12:33:06,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | job 6668787890 has completed (purged errors)
[2025-06-05 08:33:21] 2025-06-05 12:33:06,470 | INFO     | overall cleanup function is called
[2025-06-05 08:33:21] 2025-06-05 12:33:07,492 | INFO     | --- collectZombieJob: --- 10, [1049629]
[2025-06-05 08:33:21] 2025-06-05 12:33:07,492 | INFO     | zombie collector waiting for pid 1049629
[2025-06-05 08:33:21] 2025-06-05 12:33:07,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:33:21] 2025-06-05 12:33:07,492 | INFO     | collected zombie processes
[2025-06-05 08:33:21] 2025-06-05 12:33:07,492 | INFO     | will attempt to kill all subprocesses of pid=1049629
[2025-06-05 08:33:21] 2025-06-05 12:33:08,051 | INFO     | process IDs to be killed: [1049629] (in reverse order)
[2025-06-05 08:33:21] 2025-06-05 12:33:08,239 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:33:21] 2025-06-05 12:33:08,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:33:21] 2025-06-05 12:33:08,265 | INFO     | did not find any defunct processes belonging to 1049629
[2025-06-05 08:33:21] 2025-06-05 12:33:08,288 | INFO     | did not find any defunct processes belonging to 1049629
[2025-06-05 08:33:21] 2025-06-05 12:33:08,289 | INFO     | ready for new job
[2025-06-05 08:33:21] 2025-06-05 12:33:08,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:33:21] 2025-06-05 12:33:08,290 | INFO     | **************************************
[2025-06-05 08:33:21] 2025-06-05 12:33:08,290 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:33:21] 2025-06-05 12:33:08,290 | INFO     | **************************************
[2025-06-05 08:33:21] 2025-06-05 12:33:08,290 | INFO     | 
[2025-06-05 08:33:21] 2025-06-05 12:33:08,295 | INFO     | architecture information:
[2025-06-05 08:33:21] 2025-06-05 12:33:08,295 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:33:21] 2025-06-05 12:33:08,337 | INFO     | cat /etc/os-release:
[2025-06-05 08:33:21] NAME="CentOS Linux"
[2025-06-05 08:33:21] VERSION="7 (Core)"
[2025-06-05 08:33:21] ID="centos"
[2025-06-05 08:33:21] ID_LIKE="rhel fedora"
[2025-06-05 08:33:21] VERSION_ID="7"
[2025-06-05 08:33:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:33:21] ANSI_COLOR="0;31"
[2025-06-05 08:33:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:33:21] HOME_URL="https://www.centos.org/"
[2025-06-05 08:33:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:33:21] 
[2025-06-05 08:33:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:33:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:33:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:33:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:33:21] 
[2025-06-05 08:33:21] 2025-06-05 12:33:08,337 | INFO     | **************************************
[2025-06-05 08:33:21] 2025-06-05 12:33:08,840 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-05 08:33:21] 2025-06-05 12:33:08,875 | INFO     | sufficient remaining disk space (75996594176 B)
[2025-06-05 08:33:21] 2025-06-05 12:33:08,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:33:21] 2025-06-05 12:33:08,876 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:33:21] 2025-06-05 12:33:08,876 | INFO     | update_server=False
[2025-06-05 08:33:21] 2025-06-05 12:33:08,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:33:21] 2025-06-05 12:33:08,877 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:33:21] 2025-06-05 12:33:08,877 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:33:21] 2025-06-05 12:33:08,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:33:21] 2025-06-05 12:33:08,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:33:21] 2025-06-05 12:33:08,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:33:21] 2025-06-05 12:33:08,961 | INFO     | all payload control threads have been joined
[2025-06-05 08:33:21] 2025-06-05 12:33:09,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:33:21] 2025-06-05 12:33:09,541 | INFO     | aborting loop
[2025-06-05 08:33:21] 2025-06-05 12:33:09,564 | INFO     | all data control threads have been joined
[2025-06-05 08:33:21] 2025-06-05 12:33:09,882 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:09,966 | INFO     | [payload] control thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,374 | INFO     | all job control threads have been joined
[2025-06-05 08:33:21] 2025-06-05 12:33:10,503 | INFO     | [job] validate thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,546 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,569 | INFO     | [data] control thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,734 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,766 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,826 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:10,888 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:11,133 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:11,136 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:11,317 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:11,380 | INFO     | [job] control thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:11,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:33:21] 2025-06-05 12:33:11,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:33:21] 2025-06-05 12:33:12,433 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:15,459 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:33:21] 2025-06-05 12:33:15,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831197955904)>', '<ExcThread(monitor, started 139830411376384)>']
[2025-06-05 08:33:21] 2025-06-05 12:33:15,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:33:21] 2025-06-05 12:33:15,923 | INFO     | [monitor] control thread has ended
[2025-06-05 08:33:21] 2025-06-05 12:33:20,764 | INFO     | all workflow threads have been joined
[2025-06-05 08:33:21] 2025-06-05 12:33:20,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:33:21] 2025-06-05 12:33:20,765 | INFO     | traces error code: 0
[2025-06-05 08:33:21] 2025-06-05 12:33:20,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:33:21] 2025-06-05 12:33:20,913 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:33:21] 2025-06-05 12:33:20,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:33:21] 2025-06-05 12:33:20,917 [wrapper] pilotpid: 1017806
[2025-06-05 08:33:21] 2025-06-05 12:33:20,919 [wrapper] Pilot exit status: 0
[2025-06-05 08:33:21] 2025-06-05 12:33:20,964 [wrapper] pandaids: 6668787890
[2025-06-05 08:33:21] 2025-06-05 12:33:21,121 [wrapper] cleanup supervisor_pilot 3856403 1017807
[2025-06-05 08:33:21] 2025-06-05 12:33:21,128 [wrapper] Test setup, not cleaning
[2025-06-05 08:33:21] 2025-06-05 12:33:21,134 [wrapper] apfmon messages muted
[2025-06-05 08:33:21] 2025-06-05 12:33:21,142 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:33:21] 2025-06-05 12:33:21,148 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:33:21]  *** Error codes and diagnostics ***
[2025-06-05 08:33:21]     "exeErrorCode": 0,
[2025-06-05 08:33:21]     "exeErrorDiag": "",
[2025-06-05 08:33:21]     "pilotErrorCode": 0,
[2025-06-05 08:33:21]     "pilotErrorDiag": "",
[2025-06-05 08:33:21]  *** Listing of results directory ***
[2025-06-05 08:33:21] total 415848
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas    495897 May 28 14:10 pilot3.tar.gz
[2025-06-05 08:33:21] -rwx------. 1 boincer umatlas     37140 May 28 14:30 runpilot2-wrapper.sh
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas      5111 May 28 14:30 queuedata.json
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas       100 Jun  5 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:33:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 06:45 run_atlas
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas       105 Jun  5 06:45 job.xml
[2025-06-05 08:33:21] -rw-r--r--. 2 boincer umatlas 223011753 Jun  5 06:45 EVNT.44871834._003446.pool.root.1
[2025-06-05 08:33:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:45 start_atlas.sh
[2025-06-05 08:33:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 06:45 shared
[2025-06-05 08:33:21] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 06:45 input.tar.gz
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas         0 Jun  5 06:45 boinc_lockfile
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 06:45 pandaJob.out
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas    982836 Jun  5 06:45 agis_schedconf.cvmfs.json
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas   1598969 Jun  5 06:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:33:21] drwx------. 4 boincer umatlas      4096 Jun  5 06:45 pilot3
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas      6932 Jun  5 08:27 init_data.xml
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas 197124487 Jun  5 08:32 HITS.44871837._088521.pool.root.1
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas        95 Jun  5 08:32 pilot_heartbeat.json
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas       529 Jun  5 08:32 boinc_task_state.xml
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas      1035 Jun  5 08:32 memory_monitor_summary.json
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas    325825 Jun  5 08:32 log.44871837._088521.job.log.tgz.1
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas      7693 Jun  5 08:33 heartbeat.json
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas        27 Jun  5 08:33 wrapper_checkpoint.txt
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 08:33 boinc_mmap_file
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas      4476 Jun  5 08:33 pilotlog.txt
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas    605865 Jun  5 08:33 log.44871837._088521.job.log.1
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas       357 Jun  5 08:33 output.list
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas       620 Jun  5 08:33 runtime_log
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas    952320 Jun  5 08:33 result.tar.gz
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 08:33 runtime_log.err
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas       651 Jun  5 08:33 2OaNDm4iae7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzvTKDmwrmGlm.diag
[2025-06-05 08:33:21] -rw-r--r--. 1 boincer umatlas     20801 Jun  5 08:33 stderr.txt
[2025-06-05 08:33:21] HITS file was successfully produced:
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas 197124487 Jun  5 08:32 shared/HITS.pool.root.1
[2025-06-05 08:33:21]  *** Contents of shared directory: ***
[2025-06-05 08:33:21] total 411748
[2025-06-05 08:33:21] -rw-r--r--. 2 boincer umatlas 223011753 Jun  5 06:45 ATLAS.root_0
[2025-06-05 08:33:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:45 start_atlas.sh
[2025-06-05 08:33:21] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 06:45 input.tar.gz
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas 197124487 Jun  5 08:32 HITS.pool.root.1
[2025-06-05 08:33:21] -rw-------. 1 boincer umatlas    952320 Jun  5 08:33 result.tar.gz
08:33:23 (1010235): run_atlas exited; CPU time 40210.231521
08:33:23 (1010235): called boinc_finish(0)

</stderr_txt>
]]>

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