Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:45:08 (991698): wrapper (7.7.26015): starting
06:45:08 (991698): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:45:08] Arguments: --nthreads 8
[2025-06-05 06:45:08] Threads: 8
[2025-06-05 06:45:08] Checking for CVMFS
[2025-06-05 06:45:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:45:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:45:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:45:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:45:08] 2.12.6.0 54733 38513 531884 146816 2 513 25325551 32935937 17454 16776704 1 508510564 99.708 366315295 21743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 06:45:08] CVMFS is ok
[2025-06-05 06:45:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:45:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:45:08] Further information can be found at the LHC@home message board.
[2025-06-05 06:45:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:45:08] Checking for apptainer binary...
[2025-06-05 06:45:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:45:08] Running /usr/bin/apptainer --version
[2025-06-05 06:45:08] apptainer version 1.4.1-1.el9
[2025-06-05 06:45:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:45:08] c7-2-10.aglt2.org
[2025-06-05 06:45:08] apptainer works
[2025-06-05 06:45:08] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:45:08] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:45:08] Starting ATLAS job with PandaID=6668532950
[2025-06-05 06:45:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:05:16]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:05:16] 2025-06-05 13:04:53,598 | INFO     | monitor loop #584: job 0:6668532950 is in state 'finished'
[2025-06-05 09:05:16] 2025-06-05 13:04:53,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:05:16] 2025-06-05 13:04:56,106 | INFO     | monitor loop #585: job 0:6668532950 is in state 'finished'
[2025-06-05 09:05:16] 2025-06-05 13:04:56,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:05:16] 2025-06-05 13:04:58,640 | INFO     | monitor loop #586: job 0:6668532950 is in state 'finished'
[2025-06-05 09:05:16] 2025-06-05 13:04:58,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:05:16] 2025-06-05 13:04:58,704 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 09:05:16] 2025-06-05 13:04:58,705 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668532950/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:05:16] 2025-06-05 13:04:58,705 | INFO     | extracted standard info from prmon json
[2025-06-05 09:05:16] 2025-06-05 13:04:58,705 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:05:16] 2025-06-05 13:04:58,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:05:16] 2025-06-05 13:04:58,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:05:16] 2025-06-05 13:04:58,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:05:16] 2025-06-05 13:04:58,708 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:05:16] 2025-06-05 13:04:58,709 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,710 | INFO     | sum of deviations: -3329297223.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,710 | INFO     | mean x: 1749124494.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,710 | INFO     | mean y: 2209399.2481751824
[2025-06-05 09:05:16] 2025-06-05 13:04:58,710 | INFO     | -- intersect: 7306134384.304552
[2025-06-05 09:05:16] 2025-06-05 13:04:58,710 | INFO     | intersect: 7306134384.304552
[2025-06-05 09:05:16] 2025-06-05 13:04:58,711 | INFO     | chi2: 1.4598566763403715
[2025-06-05 09:05:16] 2025-06-05 13:04:58,711 | INFO     | sum of square deviations: 713140813.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | sum of deviations: -1884019220.9999993
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | mean x: 1749124341.5
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | mean y: 2211970.5606060605
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | -- intersect: 4623156136.47103
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | intersect: 4623156136.47103
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | chi2: 1.4559274444704158
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | current chi2=1.4559274444704158 (change=0.26915189234916614 %)
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | right removable region: 131
[2025-06-05 09:05:16] 2025-06-05 13:04:58,712 | INFO     | sum of square deviations: 713140813.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | sum of deviations: -19769505249.999996
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | mean x: 1749124646.5
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | mean y: 2238682.878787879
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | -- intersect: 48491019932.713295
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | intersect: 48491019932.713295
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | chi2: 0.1461435083611108
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | current chi2=0.1461435083611108 (change=89.98918792990902 %)
[2025-06-05 09:05:16] 2025-06-05 13:04:58,713 | INFO     | sum of square deviations: 635130048.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,714 | INFO     | sum of deviations: -18186401713.000004
[2025-06-05 09:05:16] 2025-06-05 13:04:58,715 | INFO     | mean x: 1749124799.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,715 | INFO     | mean y: 2235578.976377953
[2025-06-05 09:05:16] 2025-06-05 13:04:58,715 | INFO     | -- intersect: 50086917198.045975
[2025-06-05 09:05:16] 2025-06-05 13:04:58,715 | INFO     | intersect: 50086917198.045975
[2025-06-05 09:05:16] 2025-06-05 13:04:58,715 | INFO     | chi2: 0.14490664851220378
[2025-06-05 09:05:16] 2025-06-05 13:04:58,715 | INFO     | current chi2=0.14490664851220378 (change=0.8463323912074404 %)
[2025-06-05 09:05:16] 2025-06-05 13:04:58,715 | INFO     | left removable region: 20
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | sum of deviations: -12636200263.999998
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | mean x: 1749124921.0
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | mean y: 2230295.954954955
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | -- intersect: 52124727787.75318
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | intersect: 52124727787.75318
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | chi2: 0.13527478405389778
[2025-06-05 09:05:16] 2025-06-05 13:04:58,716 | INFO     | -- intersect: 52124727787.75318
[2025-06-05 09:05:16] 2025-06-05 13:04:58,717 | INFO     | current memory leak: -29.80 B/s (using 111 data points, chi2=0.14)
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | ..............................
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | . Timing measurements:
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | . get job = 0 s
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | . initial setup = 2 s
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | . payload setup = 6 s
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | . stage-in = 0 s
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | . payload execution = 8339 s
[2025-06-05 09:05:16] 2025-06-05 13:04:58,719 | INFO     | . stage-out = 1 s
[2025-06-05 09:05:16] 2025-06-05 13:04:58,720 | INFO     | . log creation = 0 s
[2025-06-05 09:05:16] 2025-06-05 13:04:58,720 | INFO     | ..............................
[2025-06-05 09:05:16] 2025-06-05 13:04:59,313 | INFO     | 
[2025-06-05 09:05:16] 2025-06-05 13:04:59,313 | INFO     | job summary report
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | --------------------------------------------------
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | PanDA job id: 6668532950
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | task id: 44871837
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | errors: (none)
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | pilot state: finished 
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | transexitcode: 0
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | exeerrorcode: 0
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | exeerrordiag: 
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | exitcode: 0
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | exitmsg: OK
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | cpuconsumptiontime: 39202 s
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | nevents: 400
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | neventsw: 0
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | pid: 1026934
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | pgrp: 1026934
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | corecount: 8
[2025-06-05 09:05:16] 2025-06-05 13:04:59,314 | INFO     | event service: False
[2025-06-05 09:05:16] 2025-06-05 13:04:59,315 | INFO     | sizes: {0: 2397390, 5: 2397596, 11: 2397652, 8350: 2425449, 8351: 2434390, 8352: 2434446, 8364: 2434744}
[2025-06-05 09:05:16] 2025-06-05 13:04:59,315 | INFO     | --------------------------------------------------
[2025-06-05 09:05:16] 2025-06-05 13:04:59,315 | INFO     | 
[2025-06-05 09:05:16] 2025-06-05 13:04:59,315 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 09:05:16] 2025-06-05 13:04:59,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,403 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:05:16] 2025-06-05 13:04:59,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:05:16] 2025-06-05 13:04:59,403 | INFO     | job 6668532950 has completed (purged errors)
[2025-06-05 09:05:16] 2025-06-05 13:04:59,403 | INFO     | overall cleanup function is called
[2025-06-05 09:05:16] 2025-06-05 13:05:00,411 | INFO     | --- collectZombieJob: --- 10, [1026934]
[2025-06-05 09:05:16] 2025-06-05 13:05:00,411 | INFO     | zombie collector waiting for pid 1026934
[2025-06-05 09:05:16] 2025-06-05 13:05:00,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:05:16] 2025-06-05 13:05:00,412 | INFO     | collected zombie processes
[2025-06-05 09:05:16] 2025-06-05 13:05:00,412 | INFO     | will attempt to kill all subprocesses of pid=1026934
[2025-06-05 09:05:16] 2025-06-05 13:05:01,627 | INFO     | process IDs to be killed: [1026934] (in reverse order)
[2025-06-05 09:05:16] 2025-06-05 13:05:01,870 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:05:16] 2025-06-05 13:05:01,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:05:16] 2025-06-05 13:05:02,136 | INFO     | did not find any defunct processes belonging to 1026934
[2025-06-05 09:05:16] 2025-06-05 13:05:02,313 | INFO     | did not find any defunct processes belonging to 1026934
[2025-06-05 09:05:16] 2025-06-05 13:05:02,313 | INFO     | ready for new job
[2025-06-05 09:05:16] 2025-06-05 13:05:02,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:05:16] 2025-06-05 13:05:02,355 | INFO     | **************************************
[2025-06-05 09:05:16] 2025-06-05 13:05:02,355 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:05:16] 2025-06-05 13:05:02,355 | INFO     | **************************************
[2025-06-05 09:05:16] 2025-06-05 13:05:02,355 | INFO     | 
[2025-06-05 09:05:16] 2025-06-05 13:05:02,403 | INFO     | architecture information:
[2025-06-05 09:05:16] 2025-06-05 13:05:02,404 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:05:16] 2025-06-05 13:05:02,472 | INFO     | cat /etc/os-release:
[2025-06-05 09:05:16] NAME="CentOS Linux"
[2025-06-05 09:05:16] VERSION="7 (Core)"
[2025-06-05 09:05:16] ID="centos"
[2025-06-05 09:05:16] ID_LIKE="rhel fedora"
[2025-06-05 09:05:16] VERSION_ID="7"
[2025-06-05 09:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:05:16] ANSI_COLOR="0;31"
[2025-06-05 09:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:05:16] HOME_URL="https://www.centos.org/"
[2025-06-05 09:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:05:16] 
[2025-06-05 09:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:05:16] 
[2025-06-05 09:05:16] 2025-06-05 13:05:02,473 | INFO     | **************************************
[2025-06-05 09:05:16] 2025-06-05 13:05:02,975 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 09:05:16] 2025-06-05 13:05:03,056 | INFO     | sufficient remaining disk space (76137103360 B)
[2025-06-05 09:05:16] 2025-06-05 13:05:03,058 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:05:16] 2025-06-05 13:05:03,059 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:05:16] 2025-06-05 13:05:03,059 | INFO     | update_server=False
[2025-06-05 09:05:16] 2025-06-05 13:05:03,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:05:16] 2025-06-05 13:05:03,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:05:16] 2025-06-05 13:05:03,064 | INFO     | aborting loop
[2025-06-05 09:05:16] 2025-06-05 13:05:03,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:05:16] 2025-06-05 13:05:03,301 | INFO     | all payload control threads have been joined
[2025-06-05 09:05:16] 2025-06-05 13:05:03,600 | INFO     | all data control threads have been joined
[2025-06-05 09:05:16] 2025-06-05 13:05:03,747 | INFO     | PID=1000088 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 09:05:16] 2025-06-05 13:05:03,747 | INFO     | .. there are 48 such processes running
[2025-06-05 09:05:16] 2025-06-05 13:05:03,747 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:05:16] 2025-06-05 13:05:03,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:05:16] 2025-06-05 13:05:03,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:05:16] 2025-06-05 13:05:03,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:05:16] 2025-06-05 13:05:04,066 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:04,085 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:04,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:04,307 | INFO     | [payload] control thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:04,390 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:04,553 | INFO     | all job control threads have been joined
[2025-06-05 09:05:16] 2025-06-05 13:05:04,608 | INFO     | [data] control thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:04,964 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,086 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,247 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,248 | INFO     | [job] validate thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,253 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,299 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,378 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,559 | INFO     | [job] control thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:05,564 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:06,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:05:16] 2025-06-05 13:05:10,183 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:05:16] 2025-06-05 13:05:11,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681573480256)>', '<ExcThread(monitor, started 140681074943744)>']
[2025-06-05 09:05:16] 2025-06-05 13:05:11,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:05:16] 2025-06-05 13:05:11,801 | INFO     | [monitor] control thread has ended
[2025-06-05 09:05:16] 2025-06-05 13:05:16,081 | INFO     | all workflow threads have been joined
[2025-06-05 09:05:16] 2025-06-05 13:05:16,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:05:16] 2025-06-05 13:05:16,082 | INFO     | traces error code: 0
[2025-06-05 09:05:16] 2025-06-05 13:05:16,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:05:16] 2025-06-05 13:05:16,332 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:05:16] 2025-06-05 13:05:16,340 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:05:16] 2025-06-05 13:05:16,343 [wrapper] pilotpid: 1000088
[2025-06-05 09:05:16] 2025-06-05 13:05:16,345 [wrapper] Pilot exit status: 0
[2025-06-05 09:05:16] 2025-06-05 13:05:16,399 [wrapper] pandaids: 6668532950
[2025-06-05 09:05:16] 2025-06-05 13:05:16,628 [wrapper] cleanup supervisor_pilot    2184 1000089
[2025-06-05 09:05:16] 2025-06-05 13:05:16,644 [wrapper] Test setup, not cleaning
[2025-06-05 09:05:16] 2025-06-05 13:05:16,660 [wrapper] apfmon messages muted
[2025-06-05 09:05:16] 2025-06-05 13:05:16,686 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:05:16] 2025-06-05 13:05:16,694 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:05:16]  *** Error codes and diagnostics ***
[2025-06-05 09:05:16]     "exeErrorCode": 0,
[2025-06-05 09:05:16]     "exeErrorDiag": "",
[2025-06-05 09:05:16]     "pilotErrorCode": 0,
[2025-06-05 09:05:16]     "pilotErrorDiag": "",
[2025-06-05 09:05:16]  *** Listing of results directory ***
[2025-06-05 09:05:16] total 422104
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas    495897 May 28 10:07 pilot3.tar.gz
[2025-06-05 09:05:16] -rwx------. 1 boincer umatlas     37140 May 28 10:38 runpilot2-wrapper.sh
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas      5111 May 28 10:38 queuedata.json
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas       100 Jun  5 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:05:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 06:45 run_atlas
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas       105 Jun  5 06:45 job.xml
[2025-06-05 09:05:16] -rw-r--r--. 2 boincer umatlas 226405349 Jun  5 06:45 EVNT.44871834._003348.pool.root.1
[2025-06-05 09:05:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:45 start_atlas.sh
[2025-06-05 09:05:16] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 06:45 shared
[2025-06-05 09:05:16] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 06:45 input.tar.gz
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas         0 Jun  5 06:45 boinc_lockfile
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 06:45 pandaJob.out
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas    982836 Jun  5 06:45 agis_schedconf.cvmfs.json
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas   1598969 Jun  5 06:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:05:16] drwx------. 4 boincer umatlas      4096 Jun  5 06:45 pilot3
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas      6932 Jun  5 09:01 init_data.xml
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas       529 Jun  5 09:04 boinc_task_state.xml
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas 199803445 Jun  5 09:04 HITS.44871837._085842.pool.root.1
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas        95 Jun  5 09:04 pilot_heartbeat.json
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas      1039 Jun  5 09:04 memory_monitor_summary.json
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas    330545 Jun  5 09:04 log.44871837._085842.job.log.tgz.1
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas      7697 Jun  5 09:04 heartbeat.json
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 09:05 boinc_mmap_file
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas        27 Jun  5 09:05 wrapper_checkpoint.txt
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas      4749 Jun  5 09:05 pilotlog.txt
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas    771500 Jun  5 09:05 log.44871837._085842.job.log.1
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas       357 Jun  5 09:05 output.list
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas       620 Jun  5 09:05 runtime_log
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas   1116160 Jun  5 09:05 result.tar.gz
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas       652 Jun  5 09:05 Zs2LDmr6We7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsLcKDmt1MsUo.diag
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 09:05 runtime_log.err
[2025-06-05 09:05:16] -rw-r--r--. 1 boincer umatlas     21154 Jun  5 09:05 stderr.txt
[2025-06-05 09:05:16] HITS file was successfully produced:
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas 199803445 Jun  5 09:04 shared/HITS.pool.root.1
[2025-06-05 09:05:16]  *** Contents of shared directory: ***
[2025-06-05 09:05:16] total 417836
[2025-06-05 09:05:16] -rw-r--r--. 2 boincer umatlas 226405349 Jun  5 06:45 ATLAS.root_0
[2025-06-05 09:05:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:45 start_atlas.sh
[2025-06-05 09:05:16] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 06:45 input.tar.gz
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas 199803445 Jun  5 09:04 HITS.pool.root.1
[2025-06-05 09:05:16] -rw-------. 1 boincer umatlas   1116160 Jun  5 09:05 result.tar.gz
09:05:39 (991698): run_atlas exited; CPU time 39516.111689
09:05:39 (991698): called boinc_finish(0)

</stderr_txt>
]]>

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