Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:01 (3165156): wrapper (7.7.26015): starting
06:42:01 (3165156): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:42:01] Arguments: --nthreads 8
[2025-06-05 06:42:01] Threads: 8
[2025-06-05 06:42:01] Checking for CVMFS
[2025-06-05 06:42:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:42:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:42:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:42:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:42:02] 2.12.6.0 912492 24632 480708 146816 2 536 21972130 40960001 14294 16776704 0 118540649 99.723 84820403 27084 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 06:42:02] CVMFS is ok
[2025-06-05 06:42:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:42:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:42:02] Further information can be found at the LHC@home message board.
[2025-06-05 06:42:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:42:02] Checking for apptainer binary...
[2025-06-05 06:42:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:42:02] Running /usr/bin/apptainer --version
[2025-06-05 06:42:02] apptainer version 1.4.1-1.el9
[2025-06-05 06:42:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:42:02] c7-10-12.aglt2.org
[2025-06-05 06:42:02] apptainer works
[2025-06-05 06:42:02] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:42:02] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:42:02] Starting ATLAS job with PandaID=6668044004
[2025-06-05 06:42:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:58:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:58:06] 2025-06-05 12:57:52,350 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668044004/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,350 | INFO     | extracted standard info from prmon json
[2025-06-05 08:58:06] 2025-06-05 12:57:52,350 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:58:06] 2025-06-05 12:57:52,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:58:06] 2025-06-05 12:57:52,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:58:06] 2025-06-05 12:57:52,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:58:06] 2025-06-05 12:57:52,353 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:58:06] 2025-06-05 12:57:52,353 | INFO     | sum of square deviations: 729467161.879699
[2025-06-05 08:58:06] 2025-06-05 12:57:52,354 | INFO     | sum of deviations: -36389755399.203
[2025-06-05 08:58:06] 2025-06-05 12:57:52,354 | INFO     | mean x: 1749124185.030075
[2025-06-05 08:58:06] 2025-06-05 12:57:52,354 | INFO     | mean y: 2315391.30075188
[2025-06-05 08:58:06] 2025-06-05 12:57:52,354 | INFO     | -- intersect: 87258061204.53268
[2025-06-05 08:58:06] 2025-06-05 12:57:52,354 | INFO     | intersect: 87258061204.53268
[2025-06-05 08:58:06] 2025-06-05 12:57:52,355 | INFO     | chi2: 1.7005239621254196
[2025-06-05 08:58:06] 2025-06-05 12:57:52,355 | INFO     | sum of square deviations: 650248291.875
[2025-06-05 08:58:06] 2025-06-05 12:57:52,355 | INFO     | sum of deviations: -32492951709.59375
[2025-06-05 08:58:06] 2025-06-05 12:57:52,355 | INFO     | mean x: 1749124032.53125
[2025-06-05 08:58:06] 2025-06-05 12:57:52,355 | INFO     | mean y: 2322876.0234375
[2025-06-05 08:58:06] 2025-06-05 12:57:52,356 | INFO     | -- intersect: 87406170657.3772
[2025-06-05 08:58:06] 2025-06-05 12:57:52,356 | INFO     | intersect: 87406170657.3772
[2025-06-05 08:58:06] 2025-06-05 12:57:52,356 | INFO     | chi2: 1.6981605429496445
[2025-06-05 08:58:06] 2025-06-05 12:57:52,356 | INFO     | current chi2=1.6981605429496445 (change=0.13898182139234003 %)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,356 | INFO     | right removable region: 127
[2025-06-05 08:58:06] 2025-06-05 12:57:52,356 | INFO     | sum of square deviations: 650245851.875
[2025-06-05 08:58:06] 2025-06-05 12:57:52,357 | INFO     | sum of deviations: -51427465385.75
[2025-06-05 08:58:06] 2025-06-05 12:57:52,357 | INFO     | mean x: 1749124337.53125
[2025-06-05 08:58:06] 2025-06-05 12:57:52,357 | INFO     | mean y: 2343692.9375
[2025-06-05 08:58:06] 2025-06-05 12:57:52,357 | INFO     | -- intersect: 138339298960.5174
[2025-06-05 08:58:06] 2025-06-05 12:57:52,357 | INFO     | intersect: 138339298960.5174
[2025-06-05 08:58:06] 2025-06-05 12:57:52,358 | INFO     | chi2: 0.3182769113794311
[2025-06-05 08:58:06] 2025-06-05 12:57:52,364 | INFO     | current chi2=0.3182769113794311 (change=81.28359738126659 %)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,365 | INFO     | sum of square deviations: 576978141.8699183
[2025-06-05 08:58:06] 2025-06-05 12:57:52,366 | INFO     | sum of deviations: -46839692618.06505
[2025-06-05 08:58:06] 2025-06-05 12:57:52,366 | INFO     | mean x: 1749124490.0325203
[2025-06-05 08:58:06] 2025-06-05 12:57:52,366 | INFO     | mean y: 2334091.0162601625
[2025-06-05 08:58:06] 2025-06-05 12:57:52,366 | INFO     | -- intersect: 141998100513.52325
[2025-06-05 08:58:06] 2025-06-05 12:57:52,366 | INFO     | intersect: 141998100513.52325
[2025-06-05 08:58:06] 2025-06-05 12:57:52,366 | INFO     | chi2: 0.3114770258397178
[2025-06-05 08:58:06] 2025-06-05 12:57:52,367 | INFO     | current chi2=0.3114770258397178 (change=2.1364683697105677 %)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,367 | INFO     | left removable region: 20
[2025-06-05 08:58:06] 2025-06-05 12:57:52,367 | INFO     | sum of square deviations: 379823701.8504669
[2025-06-05 08:58:06] 2025-06-05 12:57:52,367 | INFO     | sum of deviations: -33453645294.2056
[2025-06-05 08:58:06] 2025-06-05 12:57:52,367 | INFO     | mean x: 1749124612.037383
[2025-06-05 08:58:06] 2025-06-05 12:57:52,367 | INFO     | mean y: 2320476.551401869
[2025-06-05 08:58:06] 2025-06-05 12:57:52,367 | INFO     | -- intersect: 154059568777.23868
[2025-06-05 08:58:06] 2025-06-05 12:57:52,368 | INFO     | intersect: 154059568777.23868
[2025-06-05 08:58:06] 2025-06-05 12:57:52,368 | INFO     | chi2: 0.293568015568618
[2025-06-05 08:58:06] 2025-06-05 12:57:52,368 | INFO     | -- intersect: 154059568777.23868
[2025-06-05 08:58:06] 2025-06-05 12:57:52,368 | INFO     | current memory leak: -88.08 B/s (using 107 data points, chi2=0.29)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,369 | INFO     | ..............................
[2025-06-05 08:58:06] 2025-06-05 12:57:52,369 | INFO     | . Timing measurements:
[2025-06-05 08:58:06] 2025-06-05 12:57:52,369 | INFO     | . get job = 0 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,369 | INFO     | . initial setup = 2 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,369 | INFO     | . payload setup = 6 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,370 | INFO     | . stage-in = 0 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,370 | INFO     | . payload execution = 8100 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,370 | INFO     | . stage-out = 1 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,370 | INFO     | . log creation = 0 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,370 | INFO     | ..............................
[2025-06-05 08:58:06] 2025-06-05 12:57:52,416 | INFO     | sufficient remaining disk space (85984280576 B)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,417 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,417 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6668044004: 3982088 B (within 2537553920 B limit)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,417 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6668044004/HITS.44871837._078886.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,418 | INFO     | total size of present files: 0 B (workdir size: 3982088 B)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,418 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6668044004/HITS.44871837._078886.pool.root.1 since it does not exist
[2025-06-05 08:58:06] 2025-06-05 12:57:52,867 | INFO     | number of running child processes to parent process 3177761: 1
[2025-06-05 08:58:06] 2025-06-05 12:57:52,867 | INFO     | maximum number of monitored processes: 6
[2025-06-05 08:58:06] 2025-06-05 12:57:52,867 | INFO     | aborting job monitoring since job object (job id=6668044004) has expired
[2025-06-05 08:58:06] 2025-06-05 12:57:52,970 | INFO     | 
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | job summary report
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | --------------------------------------------------
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | PanDA job id: 6668044004
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | task id: 44871837
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | errors: (none)
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | pilot state: finished 
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | transexitcode: 0
[2025-06-05 08:58:06] 2025-06-05 12:57:52,978 | INFO     | exeerrorcode: 0
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | exeerrordiag: 
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | exitcode: 0
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | exitmsg: OK
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | cpuconsumptiontime: 44218 s
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | nevents: 400
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | neventsw: 0
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | pid: 3177761
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | pgrp: 3177761
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | corecount: 8
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | event service: False
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 8110: 2425314, 8112: 2434439, 8123: 2434581}
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | --------------------------------------------------
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | 
[2025-06-05 08:58:06] 2025-06-05 12:57:52,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:58:06] 2025-06-05 12:57:53,104 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,106 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:58:06] 2025-06-05 12:57:53,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,106 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:58:06] 2025-06-05 12:57:53,106 | INFO     | job 6668044004 has completed (purged errors)
[2025-06-05 08:58:06] 2025-06-05 12:57:53,106 | INFO     | overall cleanup function is called
[2025-06-05 08:58:06] 2025-06-05 12:57:54,115 | INFO     | --- collectZombieJob: --- 10, [3177761]
[2025-06-05 08:58:06] 2025-06-05 12:57:54,115 | INFO     | zombie collector waiting for pid 3177761
[2025-06-05 08:58:06] 2025-06-05 12:57:54,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:58:06] 2025-06-05 12:57:54,115 | INFO     | collected zombie processes
[2025-06-05 08:58:06] 2025-06-05 12:57:54,115 | INFO     | will attempt to kill all subprocesses of pid=3177761
[2025-06-05 08:58:06] 2025-06-05 12:57:54,478 | INFO     | process IDs to be killed: [3177761] (in reverse order)
[2025-06-05 08:58:06] 2025-06-05 12:57:54,967 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:58:06] 2025-06-05 12:57:54,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:58:06] 2025-06-05 12:57:54,983 | INFO     | did not find any defunct processes belonging to 3177761
[2025-06-05 08:58:06] 2025-06-05 12:57:54,998 | INFO     | did not find any defunct processes belonging to 3177761
[2025-06-05 08:58:06] 2025-06-05 12:57:54,999 | INFO     | ready for new job
[2025-06-05 08:58:06] 2025-06-05 12:57:54,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:58:06] 2025-06-05 12:57:55,000 | INFO     | **************************************
[2025-06-05 08:58:06] 2025-06-05 12:57:55,001 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:58:06] 2025-06-05 12:57:55,001 | INFO     | **************************************
[2025-06-05 08:58:06] 2025-06-05 12:57:55,001 | INFO     | 
[2025-06-05 08:58:06] 2025-06-05 12:57:55,019 | INFO     | architecture information:
[2025-06-05 08:58:06] 2025-06-05 12:57:55,045 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:58:06] 2025-06-05 12:57:55,162 | INFO     | cat /etc/os-release:
[2025-06-05 08:58:06] NAME="CentOS Linux"
[2025-06-05 08:58:06] VERSION="7 (Core)"
[2025-06-05 08:58:06] ID="centos"
[2025-06-05 08:58:06] ID_LIKE="rhel fedora"
[2025-06-05 08:58:06] VERSION_ID="7"
[2025-06-05 08:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:58:06] ANSI_COLOR="0;31"
[2025-06-05 08:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:58:06] HOME_URL="https://www.centos.org/"
[2025-06-05 08:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:58:06] 
[2025-06-05 08:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:58:06] 
[2025-06-05 08:58:06] 2025-06-05 12:57:55,162 | INFO     | **************************************
[2025-06-05 08:58:06] 2025-06-05 12:57:55,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:58:06] 2025-06-05 12:57:55,759 | INFO     | sufficient remaining disk space (85989523456 B)
[2025-06-05 08:58:06] 2025-06-05 12:57:55,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:58:06] 2025-06-05 12:57:55,760 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:58:06] 2025-06-05 12:57:55,760 | INFO     | update_server=False
[2025-06-05 08:58:06] 2025-06-05 12:57:55,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:58:06] 2025-06-05 12:57:55,852 | INFO     | all data control threads have been joined
[2025-06-05 08:58:06] 2025-06-05 12:57:55,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:58:06] 2025-06-05 12:57:56,006 | INFO     | all job control threads have been joined
[2025-06-05 08:58:06] 2025-06-05 12:57:56,202 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:58:06] 2025-06-05 12:57:56,232 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:58:06] 2025-06-05 12:57:56,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:58:06] 2025-06-05 12:57:56,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:58:06] 2025-06-05 12:57:56,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:58:06] 2025-06-05 12:57:56,386 | INFO     | aborting loop
[2025-06-05 08:58:06] 2025-06-05 12:57:56,766 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:56,858 | INFO     | [data] control thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:56,935 | INFO     | all payload control threads have been joined
[2025-06-05 08:58:06] 2025-06-05 12:57:56,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,011 | INFO     | [job] control thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,392 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,446 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:58:06] 2025-06-05 12:57:57,519 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,522 | INFO     | [job] validate thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,554 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,941 | INFO     | [payload] control thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:57,993 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:58,157 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:58,209 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:58,236 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:58,518 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:57:59,883 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:58:06] 2025-06-05 12:58:01,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090094081856)>', '<ExcThread(monitor, started 140089594201856)>']
[2025-06-05 08:58:06] 2025-06-05 12:58:01,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:58:06] 2025-06-05 12:58:01,262 | INFO     | [monitor] control thread has ended
[2025-06-05 08:58:06] 2025-06-05 12:58:06,198 | INFO     | all workflow threads have been joined
[2025-06-05 08:58:06] 2025-06-05 12:58:06,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:58:06] 2025-06-05 12:58:06,198 | INFO     | traces error code: 0
[2025-06-05 08:58:06] 2025-06-05 12:58:06,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:58:06] 2025-06-05 12:58:06,401 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:58:06] 2025-06-05 12:58:06,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:58:06] 2025-06-05 12:58:06,406 [wrapper] pilotpid: 3169737
[2025-06-05 08:58:06] 2025-06-05 12:58:06,408 [wrapper] Pilot exit status: 0
[2025-06-05 08:58:06] 2025-06-05 12:58:06,511 [wrapper] pandaids: 6668044004
[2025-06-05 08:58:06] 2025-06-05 12:58:06,608 [wrapper] cleanup supervisor_pilot 4109354 3169738
[2025-06-05 08:58:06] 2025-06-05 12:58:06,613 [wrapper] Test setup, not cleaning
[2025-06-05 08:58:06] 2025-06-05 12:58:06,625 [wrapper] apfmon messages muted
[2025-06-05 08:58:06] 2025-06-05 12:58:06,627 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:58:06] 2025-06-05 12:58:06,630 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:58:06]  *** Error codes and diagnostics ***
[2025-06-05 08:58:06]     "exeErrorCode": 0,
[2025-06-05 08:58:06]     "exeErrorDiag": "",
[2025-06-05 08:58:06]     "pilotErrorCode": 0,
[2025-06-05 08:58:06]     "pilotErrorDiag": "",
[2025-06-05 08:58:06]  *** Listing of results directory ***
[2025-06-05 08:58:06] total 425568
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas      5111 May 28 00:46 queuedata.json
[2025-06-05 08:58:06] -rwx------. 1 boincer umatlas     37140 May 28 00:48 runpilot2-wrapper.sh
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas       100 Jun  5 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:58:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 06:42 run_atlas
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas       105 Jun  5 06:42 job.xml
[2025-06-05 08:58:06] -rw-r--r--. 2 boincer umatlas 224977742 Jun  5 06:42 EVNT.44871834._001556.pool.root.1
[2025-06-05 08:58:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:42 start_atlas.sh
[2025-06-05 08:58:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 06:42 shared
[2025-06-05 08:58:06] -rw-r--r--. 2 boincer umatlas    508884 Jun  5 06:42 input.tar.gz
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas         0 Jun  5 06:42 boinc_lockfile
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 06:42 pandaJob.out
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas    982836 Jun  5 06:42 agis_schedconf.cvmfs.json
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas   1598969 Jun  5 06:42 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:58:06] drwx------. 4 boincer umatlas      4096 Jun  5 06:42 pilot3
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas      6897 Jun  5 08:56 init_data.xml
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas       529 Jun  5 08:57 boinc_task_state.xml
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas 204755766 Jun  5 08:57 HITS.44871837._078886.pool.root.1
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas      1033 Jun  5 08:57 memory_monitor_summary.json
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas    350848 Jun  5 08:57 log.44871837._078886.job.log.tgz.1
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas        95 Jun  5 08:57 pilot_heartbeat.json
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas      7694 Jun  5 08:57 heartbeat.json
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 08:58 boinc_mmap_file
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas      4353 Jun  5 08:58 pilotlog.txt
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas        27 Jun  5 08:58 wrapper_checkpoint.txt
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas    758064 Jun  5 08:58 log.44871837._078886.job.log.1
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas       357 Jun  5 08:58 output.list
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas       620 Jun  5 08:58 runtime_log
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas   1126400 Jun  5 08:58 result.tar.gz
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 08:58 runtime_log.err
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas       654 Jun  5 08:58 h6LODmttNe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0HbKDmfhyZ8m.diag
[2025-06-05 08:58:06] -rw-r--r--. 1 boincer umatlas     21295 Jun  5 08:58 stderr.txt
[2025-06-05 08:58:06] HITS file was successfully produced:
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas 204755766 Jun  5 08:57 shared/HITS.pool.root.1
[2025-06-05 08:58:06]  *** Contents of shared directory: ***
[2025-06-05 08:58:06] total 421292
[2025-06-05 08:58:06] -rw-r--r--. 2 boincer umatlas 224977742 Jun  5 06:42 ATLAS.root_0
[2025-06-05 08:58:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:42 start_atlas.sh
[2025-06-05 08:58:06] -rw-r--r--. 2 boincer umatlas    508884 Jun  5 06:42 input.tar.gz
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas 204755766 Jun  5 08:57 HITS.pool.root.1
[2025-06-05 08:58:06] -rw-------. 1 boincer umatlas   1126400 Jun  5 08:58 result.tar.gz
08:58:28 (3165156): run_atlas exited; CPU time 44302.965590
08:58:28 (3165156): called boinc_finish(0)

</stderr_txt>
]]>

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