Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:33:13 (20962): wrapper (7.7.26015): starting
12:33:13 (20962): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 12:33:13] Arguments: --nthreads 8
[2025-06-05 12:33:13] Threads: 8
[2025-06-05 12:33:13] Checking for CVMFS
[2025-06-05 12:33:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:33:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:33:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:33:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:33:14] 2.11.2.0 16729 34645 88024 146816 1 159 20138487 25165824 3708 130560 0 17890553 99.822 20700487 2720 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 12:33:14] CVMFS is ok
[2025-06-05 12:33:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:33:14] Checking for apptainer binary...
[2025-06-05 12:33:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:33:14] Running /usr/bin/apptainer --version
[2025-06-05 12:33:15] apptainer version 1.3.2-1.el7
[2025-06-05 12:33:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:33:16] cg-vwn332.simple-grid.lan
[2025-06-05 12:33:16] apptainer works
[2025-06-05 12:33:16] Set ATHENA_PROC_NUMBER=8
[2025-06-05 12:33:16] Set ATHENA_CORE_NUMBER=8
[2025-06-05 12:33:16] Starting ATLAS job with PandaID=6667930980
[2025-06-05 12:33:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:48:44]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:48:44] 2025-06-05 15:43:21,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:48:44] 2025-06-05 15:43:21,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:48:44] 2025-06-05 15:43:21,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:48:44] 2025-06-05 15:43:21,356 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:48:44] 2025-06-05 15:43:21,357 | INFO     | sum of square deviations: 8540720135.5
[2025-06-05 18:48:44] 2025-06-05 15:43:21,360 | INFO     | sum of deviations: -51110314823.5
[2025-06-05 18:48:44] 2025-06-05 15:43:21,360 | INFO     | mean x: 1749128906.5
[2025-06-05 18:48:44] 2025-06-05 15:43:21,360 | INFO     | mean y: 2524775.341059603
[2025-06-05 18:48:44] 2025-06-05 15:43:21,360 | INFO     | -- intersect: 10469853953.651106
[2025-06-05 18:48:44] 2025-06-05 15:43:21,360 | INFO     | intersect: 10469853953.651106
[2025-06-05 18:48:44] 2025-06-05 15:43:21,361 | INFO     | chi2: 2.824552468033364
[2025-06-05 18:48:44] 2025-06-05 15:43:21,362 | INFO     | sum of square deviations: 8123493708.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,364 | INFO     | sum of deviations: -30058182063.000015
[2025-06-05 18:48:44] 2025-06-05 15:43:21,365 | INFO     | mean x: 1749128754.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,365 | INFO     | mean y: 2532372.1043771044
[2025-06-05 18:48:44] 2025-06-05 15:43:21,367 | INFO     | -- intersect: 6474579059.059276
[2025-06-05 18:48:44] 2025-06-05 15:43:21,367 | INFO     | intersect: 6474579059.059276
[2025-06-05 18:48:44] 2025-06-05 15:43:21,368 | INFO     | chi2: 2.0591807418416024
[2025-06-05 18:48:44] 2025-06-05 15:43:21,368 | INFO     | current chi2=2.0591807418416024 (change=27.097097145611276 %)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,368 | INFO     | sum of square deviations: 7720081493.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,371 | INFO     | sum of deviations: -29165316645.00001
[2025-06-05 18:48:44] 2025-06-05 15:43:21,371 | INFO     | mean x: 1749128601.5
[2025-06-05 18:48:44] 2025-06-05 15:43:21,371 | INFO     | mean y: 2532709.671232877
[2025-06-05 18:48:44] 2025-06-05 15:43:21,371 | INFO     | -- intersect: 6610479732.229114
[2025-06-05 18:48:44] 2025-06-05 15:43:21,372 | INFO     | intersect: 6610479732.229114
[2025-06-05 18:48:44] 2025-06-05 15:43:21,372 | INFO     | chi2: 2.0583386008518745
[2025-06-05 18:48:44] 2025-06-05 15:43:21,372 | INFO     | current chi2=2.0583386008518745 (change=0.040896895188265205 %)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,372 | INFO     | right removable region: 291
[2025-06-05 18:48:44] 2025-06-05 15:43:21,373 | INFO     | sum of square deviations: 8123493708.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,375 | INFO     | sum of deviations: -107989977805.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,376 | INFO     | mean x: 1749129059.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,376 | INFO     | mean y: 2545444.414141414
[2025-06-05 18:48:44] 2025-06-05 15:43:21,376 | INFO     | -- intersect: 23254660242.44416
[2025-06-05 18:48:44] 2025-06-05 15:43:21,376 | INFO     | intersect: 23254660242.44416
[2025-06-05 18:48:44] 2025-06-05 15:43:21,376 | INFO     | chi2: 1.0461214997848165
[2025-06-05 18:48:44] 2025-06-05 15:43:21,377 | INFO     | current chi2=1.0461214997848165 (change=62.96328315284602 %)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,377 | INFO     | sum of square deviations: 7720081493.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,380 | INFO     | sum of deviations: -109115367964.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,380 | INFO     | mean x: 1749129211.5
[2025-06-05 18:48:44] 2025-06-05 15:43:21,380 | INFO     | mean y: 2545851.4589041094
[2025-06-05 18:48:44] 2025-06-05 15:43:21,380 | INFO     | -- intersect: 24724678344.808697
[2025-06-05 18:48:44] 2025-06-05 15:43:21,380 | INFO     | intersect: 24724678344.808697
[2025-06-05 18:48:44] 2025-06-05 15:43:21,381 | INFO     | chi2: 1.0222525847972397
[2025-06-05 18:48:44] 2025-06-05 15:43:21,381 | INFO     | current chi2=1.0222525847972397 (change=2.2816580093695205 %)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,386 | INFO     | left removable region: 20
[2025-06-05 18:48:44] 2025-06-05 15:43:21,387 | INFO     | sum of square deviations: 6171352920.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,389 | INFO     | sum of deviations: -70456239337.00003
[2025-06-05 18:48:44] 2025-06-05 15:43:21,389 | INFO     | mean x: 1749129181.0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,389 | INFO     | mean y: 2548422.302583026
[2025-06-05 18:48:44] 2025-06-05 15:43:21,389 | INFO     | -- intersect: 19971761948.96423
[2025-06-05 18:48:44] 2025-06-05 15:43:21,390 | INFO     | intersect: 19971761948.96423
[2025-06-05 18:48:44] 2025-06-05 15:43:21,390 | INFO     | chi2: 0.22277483019390443
[2025-06-05 18:48:44] 2025-06-05 15:43:21,390 | INFO     | -- intersect: 19971761948.96423
[2025-06-05 18:48:44] 2025-06-05 15:43:21,390 | INFO     | current memory leak: -11.42 B/s (using 271 data points, chi2=0.22)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,391 | INFO     | ..............................
[2025-06-05 18:48:44] 2025-06-05 15:43:21,391 | INFO     | . Timing measurements:
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | . get job = 0 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | . initial setup = 2 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | . payload setup = 20 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | . stage-in = 0 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | . payload execution = 18407 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | . stage-out = 3 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | . log creation = 0 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,392 | INFO     | ..............................
[2025-06-05 18:48:44] 2025-06-05 15:43:21,526 | INFO     | 
[2025-06-05 18:48:44] 2025-06-05 15:43:21,531 | INFO     | job summary report
[2025-06-05 18:48:44] 2025-06-05 15:43:21,531 | INFO     | --------------------------------------------------
[2025-06-05 18:48:44] 2025-06-05 15:43:21,531 | INFO     | PanDA job id: 6667930980
[2025-06-05 18:48:44] 2025-06-05 15:43:21,531 | INFO     | task id: 44871837
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | errors: (none)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | pilot state: finished 
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | transexitcode: 0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | exeerrorcode: 0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | exeerrordiag: 
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | exitcode: 0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | exitmsg: OK
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | cpuconsumptiontime: 70129 s
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | nevents: 400
[2025-06-05 18:48:44] 2025-06-05 15:43:21,532 | INFO     | neventsw: 0
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | pid: 10816
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | pgrp: 10816
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | corecount: 8
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | event service: False
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | sizes: {0: 2396564, 1: 2397250, 2: 2397449, 12: 2397449, 23: 2397477, 24: 2397711, 34: 2397867, 18431: 2429564, 18432: 2429563, 18436: 2438562, 18439: 2438618, 185
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | --------------------------------------------------
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | 
[2025-06-05 18:48:44] 2025-06-05 15:43:21,533 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-06-05 18:48:44] 2025-06-05 15:43:21,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:48:44] 2025-06-05 15:43:21,913 | INFO     | job 6667930980 has completed (purged errors)
[2025-06-05 18:48:44] 2025-06-05 15:43:21,913 | INFO     | overall cleanup function is called
[2025-06-05 18:48:44] 2025-06-05 15:43:22,922 | INFO     | --- collectZombieJob: --- 10, [10816]
[2025-06-05 18:48:44] 2025-06-05 15:43:22,922 | INFO     | zombie collector waiting for pid 10816
[2025-06-05 18:48:44] 2025-06-05 15:43:22,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:48:44] 2025-06-05 15:43:22,923 | INFO     | collected zombie processes
[2025-06-05 18:48:44] 2025-06-05 15:43:22,923 | INFO     | will attempt to kill all subprocesses of pid=10816
[2025-06-05 18:48:44] 2025-06-05 15:43:23,025 | INFO     | process IDs to be killed: [10816] (in reverse order)
[2025-06-05 18:48:44] 2025-06-05 15:43:23,800 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:48:44] 2025-06-05 15:43:23,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:48:44] 2025-06-05 15:43:23,804 | INFO     | did not find any defunct processes belonging to 10816
[2025-06-05 18:48:44] 2025-06-05 15:43:23,809 | INFO     | did not find any defunct processes belonging to 10816
[2025-06-05 18:48:44] 2025-06-05 15:43:23,809 | INFO     | ready for new job
[2025-06-05 18:48:44] 2025-06-05 15:43:23,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:48:44] 2025-06-05 15:43:23,813 | INFO     | **************************************
[2025-06-05 18:48:44] 2025-06-05 15:43:23,813 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:48:44] 2025-06-05 15:43:23,813 | INFO     | **************************************
[2025-06-05 18:48:44] 2025-06-05 15:43:23,813 | INFO     | 
[2025-06-05 18:48:44] 2025-06-05 15:43:23,814 | INFO     | pilot is running in a VM
[2025-06-05 18:48:44] 2025-06-05 15:43:23,814 | INFO     | architecture information:
[2025-06-05 18:48:44] 2025-06-05 15:43:23,823 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:48:44] 2025-06-05 15:43:24,036 | INFO     | cat /etc/os-release:
[2025-06-05 18:48:44] NAME="CentOS Linux"
[2025-06-05 18:48:44] VERSION="7 (Core)"
[2025-06-05 18:48:44] ID="centos"
[2025-06-05 18:48:44] ID_LIKE="rhel fedora"
[2025-06-05 18:48:44] VERSION_ID="7"
[2025-06-05 18:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:48:44] ANSI_COLOR="0;31"
[2025-06-05 18:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:48:44] HOME_URL="https://www.centos.org/"
[2025-06-05 18:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:48:44] 
[2025-06-05 18:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:48:44] 
[2025-06-05 18:48:44] 2025-06-05 15:43:24,036 | INFO     | **************************************
[2025-06-05 18:48:44] 2025-06-05 15:43:24,540 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-06-05 18:48:44] 2025-06-05 15:43:24,647 | INFO     | sufficient remaining disk space (496653828096 B)
[2025-06-05 18:48:44] 2025-06-05 15:43:24,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:48:44] 2025-06-05 15:43:24,647 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:48:44] 2025-06-05 15:43:24,648 | INFO     | update_server=False
[2025-06-05 18:48:44] 2025-06-05 15:43:24,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:48:44] 2025-06-05 15:43:24,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:48:44] 2025-06-05 15:43:24,654 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:48:44] 2025-06-05 15:43:24,655 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:48:44] 2025-06-05 15:43:24,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:48:44] 2025-06-05 15:43:24,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:48:44] 2025-06-05 15:43:24,781 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 18:48:44] 2025-06-05 15:43:24,782 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 18:48:44] 2025-06-05 15:43:24,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:48:44] 2025-06-05 15:43:24,782 | INFO     | will abort loop
[2025-06-05 18:48:44] 2025-06-05 15:43:24,802 | INFO     | all payload control threads have been joined
[2025-06-05 18:48:44] 2025-06-05 15:43:25,347 | INFO     | all data control threads have been joined
[2025-06-05 18:48:44] 2025-06-05 15:43:25,654 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:25,760 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:25,788 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:25,808 | INFO     | [payload] control thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:25,850 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:25,980 | INFO     | all job control threads have been joined
[2025-06-05 18:48:44] 2025-06-05 15:43:26,041 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,051 | INFO     | [job] validate thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,076 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,208 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,281 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,353 | INFO     | [data] control thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:48:44] 2025-06-05 15:43:26,655 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,853 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:26,986 | INFO     | [job] control thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:27,546 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:27,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:48:44] 2025-06-05 15:43:31,678 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:48:44] 2025-06-05 15:43:32,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140689861834560)>', '<ExcThread(monitor, started 140689438406400)>']
[2025-06-05 18:48:44] 2025-06-05 15:43:32,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:48:44] 2025-06-05 15:43:32,702 | INFO     | [monitor] control thread has ended
[2025-06-05 18:48:44] 2025-06-05 15:43:37,399 | INFO     | all workflow threads have been joined
[2025-06-05 18:48:44] 2025-06-05 15:43:37,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:48:44] 2025-06-05 15:43:37,400 | INFO     | traces error code: 0
[2025-06-05 18:48:44] 2025-06-05 15:43:37,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:48:44] 2025-06-05 15:43:37,929 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:48:44] 2025-06-05 15:43:38,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:48:44] 2025-06-05 15:43:38,165 [wrapper] pilotpid: 30494
[2025-06-05 18:48:44] 2025-06-05 15:43:38,258 [wrapper] Pilot exit status: 0
[2025-06-05 18:48:44] 2025-06-05 15:43:38,755 [wrapper] pandaids: 6667930980
[2025-06-05 18:48:44] 2025-06-05 15:43:39,693 [wrapper] cleanup supervisor_pilot 14286 30495
[2025-06-05 18:48:44] 2025-06-05 15:43:39,753 [wrapper] Test setup, not cleaning
[2025-06-05 18:48:44] 2025-06-05 15:43:39,850 [wrapper] apfmon messages muted
[2025-06-05 18:48:44] 2025-06-05 15:43:39,942 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:48:44] 2025-06-05 15:43:40,030 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:48:44]  *** Error codes and diagnostics ***
[2025-06-05 18:48:44]     "exeErrorCode": 0,
[2025-06-05 18:48:44]     "exeErrorDiag": "",
[2025-06-05 18:48:44]     "pilotErrorCode": 0,
[2025-06-05 18:48:44]     "pilotErrorDiag": "",
[2025-06-05 18:48:44]  *** Listing of results directory ***
[2025-06-05 18:48:44] total 419628
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc    495897 May 28 06:31 pilot3.tar.gz
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc      5111 May 28 06:36 queuedata.json
[2025-06-05 18:48:44] -rwx------. 1 boinc boinc     37140 May 28 06:37 runpilot2-wrapper.sh
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc       100 Jun  5 12:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 12:33 run_atlas
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc       105 Jun  5 12:33 job.xml
[2025-06-05 18:48:44] -rw-r--r--. 2 boinc boinc 222130878 Jun  5 12:33 EVNT.44871834._003076.pool.root.1
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc      6391 Jun  5 12:33 init_data.xml
[2025-06-05 18:48:44] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:33 start_atlas.sh
[2025-06-05 18:48:44] drwxrwx--x. 2 boinc boinc        68 Jun  5 12:33 shared
[2025-06-05 18:48:44] -rw-r--r--. 2 boinc boinc    508878 Jun  5 12:33 input.tar.gz
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc         0 Jun  5 12:33 boinc_lockfile
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc      2559 Jun  5 12:33 pandaJob.out
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc    982836 Jun  5 12:33 agis_schedconf.cvmfs.json
[2025-06-05 18:48:44] drwx------. 4 boinc boinc      4096 Jun  5 12:33 pilot3
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc 199749871 Jun  5 17:40 HITS.44871837._078673.pool.root.1
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc       531 Jun  5 17:40 boinc_task_state.xml
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc      1019 Jun  5 17:41 memory_monitor_summary.json
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc   1598969 Jun  5 17:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc    416784 Jun  5 17:41 log.44871837._078673.job.log.tgz.1
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc        95 Jun  5 17:42 pilot_heartbeat.json
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc      7693 Jun  5 17:43 heartbeat.json
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc      4726 Jun  5 17:43 pilotlog.txt
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc   1586023 Jun  5 17:43 log.44871837._078673.job.log.1
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc       357 Jun  5 17:43 output.list
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc       620 Jun  5 17:43 runtime_log
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc   2017280 Jun  5 17:43 result.tar.gz
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc      8673 Jun  5 17:43 runtime_log.err
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc       657 Jun  5 17:43 Hw7KDmPiNe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhuSKDmpoLSDm.diag
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc      8192 Jun  5 18:48 boinc_mmap_file
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc        28 Jun  5 18:48 wrapper_checkpoint.txt
[2025-06-05 18:48:44] -rw-r--r--. 1 boinc boinc     20538 Jun  5 18:48 stderr.txt
[2025-06-05 18:48:44] HITS file was successfully produced:
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc 199749871 Jun  5 17:40 shared/HITS.pool.root.1
[2025-06-05 18:48:44]  *** Contents of shared directory: ***
[2025-06-05 18:48:44] total 414488
[2025-06-05 18:48:44] -rw-r--r--. 2 boinc boinc 222130878 Jun  5 12:33 ATLAS.root_0
[2025-06-05 18:48:44] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:33 start_atlas.sh
[2025-06-05 18:48:44] -rw-r--r--. 2 boinc boinc    508878 Jun  5 12:33 input.tar.gz
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc 199749871 Jun  5 17:40 HITS.pool.root.1
[2025-06-05 18:48:44] -rw-------. 1 boinc boinc   2017280 Jun  5 17:43 result.tar.gz
18:48:46 (20962): run_atlas exited; CPU time 70366.897974
18:48:46 (20962): called boinc_finish(0)

</stderr_txt>
]]>

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