Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:31:33 (3667470): wrapper (7.7.26015): starting
06:31:33 (3667470): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:31:33] Arguments: --nthreads 8
[2025-06-05 06:31:33] Threads: 8
[2025-06-05 06:31:33] Checking for CVMFS
[2025-06-05 06:31:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:31:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:31:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:31:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:31:33] 2.12.6.0 2939844 24570 510376 146816 2 346 37524071 40960001 10503 16776704 1 129441705 99.694 107663600 27897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 06:31:33] CVMFS is ok
[2025-06-05 06:31:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:31:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:31:33] Further information can be found at the LHC@home message board.
[2025-06-05 06:31:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:31:33] Checking for apptainer binary...
[2025-06-05 06:31:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:31:33] Running /usr/bin/apptainer --version
[2025-06-05 06:31:33] apptainer version 1.4.1-1.el9
[2025-06-05 06:31:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:31:33] c7-11-15.aglt2.org
[2025-06-05 06:31:33] apptainer works
[2025-06-05 06:31:33] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:31:33] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:31:33] Starting ATLAS job with PandaID=6680607154
[2025-06-05 06:31:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:37:30]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:37:30]  is_altstaged=None
[2025-06-05 07:37:30]  is_tar=False
[2025-06-05 07:37:30]  lfn=log.45006595._057083.job.log.tgz.1
[2025-06-05 07:37:30]  mtime=0
[2025-06-05 07:37:30]  protocol_id=None
[2025-06-05 07:37:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 07:37:30]  replicas=None
[2025-06-05 07:37:30]  scope=mc23_13p6TeV
[2025-06-05 07:37:30]  status=None
[2025-06-05 07:37:30]  status_code=0
[2025-06-05 07:37:30]  storage_token=
[2025-06-05 07:37:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680607154/log.45006595._057083.job.log.tgz.1
[2025-06-05 07:37:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/70/log.45006595._057083.job.log.tgz.1
[2025-06-05 07:37:30]  workdir=None
[2025-06-05 07:37:30] ]
[2025-06-05 07:37:30] 2025-06-05 11:36:52,493 | INFO     | transferring file log.45006595._057083.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680607154/log.45006595._057083.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 07:37:30] 2025-06-05 11:36:52,493 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680607154/log.45006595._057083.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057083.job
[2025-06-05 07:37:30] 2025-06-05 11:36:52,516 | INFO     | adding to output.list: log.45006595._057083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/70/log.45006595._057083.job.log.tg
[2025-06-05 07:37:30] 2025-06-05 11:36:52,517 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 07:37:30] 2025-06-05 11:36:52,517 | INFO     | summary of transferred files:
[2025-06-05 07:37:30] 2025-06-05 11:36:52,517 | INFO     |  -- lfn=log.45006595._057083.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 07:37:30] 2025-06-05 11:36:52,517 | INFO     | stage-out finished correctly
[2025-06-05 07:37:30] 2025-06-05 11:36:52,608 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 07:37:30] 2025-06-05 11:36:54,147 | INFO     | job 6680607154 has state=finished
[2025-06-05 07:37:30] 2025-06-05 11:36:54,147 | INFO     | preparing for final server update for job 6680607154 in state='finished'
[2025-06-05 07:37:30] 2025-06-05 11:36:54,148 | INFO     | this job has now completed (state=finished)
[2025-06-05 07:37:30] 2025-06-05 11:36:54,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 07:37:30] 2025-06-05 11:36:54,148 | INFO     | log transfer has been attempted: DONE
[2025-06-05 07:37:30] 2025-06-05 11:36:54,148 | INFO     | job 6680607154 has finished - writing final server update
[2025-06-05 07:37:30] 2025-06-05 11:36:54,148 | INFO     | total number of processed events: 400 (read)
[2025-06-05 07:37:30] 2025-06-05 11:36:54,167 | INFO     | executing command: lscpu
[2025-06-05 07:37:30] 2025-06-05 11:36:54,236 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 07:37:30] 2025-06-05 11:36:54,738 | INFO     | monitor loop #293: job 0:6680607154 is in state 'finished'
[2025-06-05 07:37:30] 2025-06-05 11:36:54,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:37:30] 2025-06-05 11:36:57,244 | INFO     | monitor loop #294: job 0:6680607154 is in state 'finished'
[2025-06-05 07:37:30] 2025-06-05 11:36:57,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:37:30] 2025-06-05 11:36:58,432 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 07:37:30] 2025-06-05 11:36:58,436 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3244.823843749999
[2025-06-05 07:37:30] 2025-06-05 11:36:58,460 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680607154/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:37:30] 2025-06-05 11:36:58,460 | INFO     | extracted standard info from prmon json
[2025-06-05 07:37:30] 2025-06-05 11:36:58,460 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:37:30] 2025-06-05 11:36:58,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:37:30] 2025-06-05 11:36:58,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:37:30] 2025-06-05 11:36:58,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:37:30] 2025-06-05 11:36:58,462 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:37:30] 2025-06-05 11:36:58,462 | INFO     | sum of square deviations: 57407588.0
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | sum of deviations: 382668372.00000006
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | mean x: 1749121543.0
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | mean y: 2634207.1578947366
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | -- intersect: -11656686739.925583
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | intersect: -11656686739.925583
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | chi2: 0.010054618730706217
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | -- intersect: -11656686739.925583
[2025-06-05 07:37:30] 2025-06-05 11:36:58,463 | INFO     | current memory leak: 6.67 B/s (using 57 data points, chi2=0.01)
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | could have reported an average CPU frequency of 3246 MHz (6 samples)
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | ..............................
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . Timing measurements:
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . get job = 0 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . initial setup = 2 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . payload setup = 6 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . stage-in = 0 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . payload execution = 3882 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . stage-out = 0 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | . log creation = 0 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,464 | INFO     | ..............................
[2025-06-05 07:37:30] 2025-06-05 11:36:58,542 | INFO     | 
[2025-06-05 07:37:30] 2025-06-05 11:36:58,542 | INFO     | job summary report
[2025-06-05 07:37:30] 2025-06-05 11:36:58,542 | INFO     | --------------------------------------------------
[2025-06-05 07:37:30] 2025-06-05 11:36:58,542 | INFO     | PanDA job id: 6680607154
[2025-06-05 07:37:30] 2025-06-05 11:36:58,542 | INFO     | task id: 45006595
[2025-06-05 07:37:30] 2025-06-05 11:36:58,542 | INFO     | errors: (none)
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | pilot state: finished 
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | transexitcode: 0
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | exeerrorcode: 0
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | exeerrordiag: 
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | exitcode: 0
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | exitmsg: OK
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | cpuconsumptiontime: 27626 s
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | nevents: 400
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | neventsw: 0
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | pid: 3678799
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | pgrp: 3678799
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | corecount: 8
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | event service: False
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | sizes: {0: 2397630, 4: 2397892, 11: 2397920, 3893: 2423897, 3894: 2432894, 3900: 2433032}
[2025-06-05 07:37:30] 2025-06-05 11:36:58,543 | INFO     | --------------------------------------------------
[2025-06-05 07:37:30] 2025-06-05 11:36:58,544 | INFO     | 
[2025-06-05 07:37:30] 2025-06-05 11:36:58,544 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 07:37:30] 2025-06-05 11:36:58,566 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | job 6680607154 has completed (purged errors)
[2025-06-05 07:37:30] 2025-06-05 11:36:58,568 | INFO     | overall cleanup function is called
[2025-06-05 07:37:30] 2025-06-05 11:36:59,577 | INFO     | --- collectZombieJob: --- 10, [3678799]
[2025-06-05 07:37:30] 2025-06-05 11:36:59,577 | INFO     | zombie collector waiting for pid 3678799
[2025-06-05 07:37:30] 2025-06-05 11:36:59,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:37:30] 2025-06-05 11:36:59,577 | INFO     | collected zombie processes
[2025-06-05 07:37:30] 2025-06-05 11:36:59,577 | INFO     | will attempt to kill all subprocesses of pid=3678799
[2025-06-05 07:37:30] 2025-06-05 11:36:59,884 | INFO     | process IDs to be killed: [3678799] (in reverse order)
[2025-06-05 07:37:30] 2025-06-05 11:36:59,995 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:37:30] 2025-06-05 11:36:59,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:37:30] 2025-06-05 11:37:00,009 | INFO     | did not find any defunct processes belonging to 3678799
[2025-06-05 07:37:30] 2025-06-05 11:37:00,026 | INFO     | did not find any defunct processes belonging to 3678799
[2025-06-05 07:37:30] 2025-06-05 11:37:00,027 | INFO     | ready for new job
[2025-06-05 07:37:30] 2025-06-05 11:37:00,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:37:30] 2025-06-05 11:37:00,030 | INFO     | ***************************************
[2025-06-05 07:37:30] 2025-06-05 11:37:00,030 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 07:37:30] 2025-06-05 11:37:00,030 | INFO     | ***************************************
[2025-06-05 07:37:30] 2025-06-05 11:37:00,030 | INFO     | 
[2025-06-05 07:37:30] 2025-06-05 11:37:00,046 | INFO     | architecture information:
[2025-06-05 07:37:30] 2025-06-05 11:37:00,047 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:37:30] 2025-06-05 11:37:00,067 | INFO     | cat /etc/os-release:
[2025-06-05 07:37:30] NAME="CentOS Linux"
[2025-06-05 07:37:30] VERSION="7 (Core)"
[2025-06-05 07:37:30] ID="centos"
[2025-06-05 07:37:30] ID_LIKE="rhel fedora"
[2025-06-05 07:37:30] VERSION_ID="7"
[2025-06-05 07:37:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:37:30] ANSI_COLOR="0;31"
[2025-06-05 07:37:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:37:30] HOME_URL="https://www.centos.org/"
[2025-06-05 07:37:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:37:30] 
[2025-06-05 07:37:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:37:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:37:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:37:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:37:30] 
[2025-06-05 07:37:30] 2025-06-05 11:37:00,068 | INFO     | ***************************************
[2025-06-05 07:37:30] 2025-06-05 11:37:00,571 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 07:37:30] 2025-06-05 11:37:00,596 | INFO     | sufficient remaining disk space (86523248640 B)
[2025-06-05 07:37:30] 2025-06-05 11:37:00,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:37:30] 2025-06-05 11:37:00,596 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:37:30] 2025-06-05 11:37:00,597 | INFO     | update_server=False
[2025-06-05 07:37:30] 2025-06-05 11:37:00,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:37:30] 2025-06-05 11:37:00,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:37:30] 2025-06-05 11:37:00,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:37:30] 2025-06-05 11:37:00,756 | INFO     | aborting loop
[2025-06-05 07:37:30] 2025-06-05 11:37:00,831 | INFO     | all payload control threads have been joined
[2025-06-05 07:37:30] 2025-06-05 11:37:01,040 | INFO     | all data control threads have been joined
[2025-06-05 07:37:30] 2025-06-05 11:37:01,602 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:01,748 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:01,762 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:01,837 | INFO     | [payload] control thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:01,864 | INFO     | [job] validate thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:02,023 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:02,046 | INFO     | [data] control thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:02,136 | INFO     | all job control threads have been joined
[2025-06-05 07:37:30] 2025-06-05 11:37:02,139 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:02,245 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:02,423 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:02,630 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:02,802 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:03,142 | INFO     | [job] control thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:03,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:37:30] 2025-06-05 11:37:03,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:37:30] 2025-06-05 11:37:04,558 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:07,205 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:11,341 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:37:30] 2025-06-05 11:37:12,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:37:30] 2025-06-05 11:37:13,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816277796672)>', '<ExcThread(monitor, started 139815764858624)>']
[2025-06-05 07:37:30] 2025-06-05 11:37:18,212 | INFO     | all workflow threads have been joined
[2025-06-05 07:37:30] 2025-06-05 11:37:18,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:37:30] 2025-06-05 11:37:18,212 | INFO     | traces error code: 0
[2025-06-05 07:37:30] 2025-06-05 11:37:18,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:37:30] 2025-06-05 11:37:30,265 | INFO     | PID=3671670 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 07:37:30] 2025-06-05 11:37:30,267 | INFO     | .. there are 12 such processes running
[2025-06-05 07:37:30] 2025-06-05 11:37:30,269 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:37:30] 2025-06-05 11:37:30,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:37:30] 2025-06-05 11:37:30,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:37:30] 2025-06-05 11:37:30,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:37:30] 2025-06-05 11:37:30,269 | INFO     | [monitor] control thread has ended
[2025-06-05 07:37:30] 2025-06-05 11:37:30,386 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:37:30] 2025-06-05 11:37:30,389 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:37:30] 2025-06-05 11:37:30,392 [wrapper] pilotpid: 3671670
[2025-06-05 07:37:30] 2025-06-05 11:37:30,395 [wrapper] Pilot exit status: 0
[2025-06-05 07:37:30] 2025-06-05 11:37:30,413 [wrapper] pandaids: 6680607154
[2025-06-05 07:37:30] 2025-06-05 11:37:30,492 [wrapper] cleanup supervisor_pilot 3923152 3671671
[2025-06-05 07:37:30] 2025-06-05 11:37:30,496 [wrapper] Test setup, not cleaning
[2025-06-05 07:37:30] 2025-06-05 11:37:30,501 [wrapper] apfmon messages muted
[2025-06-05 07:37:30] 2025-06-05 11:37:30,504 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:37:30] 2025-06-05 11:37:30,507 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:37:30]  *** Error codes and diagnostics ***
[2025-06-05 07:37:30]     "exeErrorCode": 0,
[2025-06-05 07:37:30]     "exeErrorDiag": "",
[2025-06-05 07:37:30]     "pilotErrorCode": 0,
[2025-06-05 07:37:30]     "pilotErrorDiag": "",
[2025-06-05 07:37:30]  *** Listing of results directory ***
[2025-06-05 07:37:30] total 387384
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas    529402 Jun  5 05:53 pilot3.tar.gz
[2025-06-05 07:37:30] -rwx------. 1 boincer umatlas     37140 Jun  5 06:31 runpilot2-wrapper.sh
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 06:31 queuedata.json
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas       100 Jun  5 06:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:37:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 06:31 run_atlas
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas       105 Jun  5 06:31 job.xml
[2025-06-05 07:37:30] -rw-r--r--. 2 boincer umatlas 216084338 Jun  5 06:31 EVNT.45006593._000952.pool.root.1
[2025-06-05 07:37:30] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 06:31 start_atlas.sh
[2025-06-05 07:37:30] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 06:31 shared
[2025-06-05 07:37:30] -rw-r--r--. 2 boincer umatlas    541918 Jun  5 06:31 input.tar.gz
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas         0 Jun  5 06:31 boinc_lockfile
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas      2523 Jun  5 06:31 pandaJob.out
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas    982836 Jun  5 06:31 agis_schedconf.cvmfs.json
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas   1598969 Jun  5 06:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:37:30] drwx------. 4 boincer umatlas      4096 Jun  5 06:31 pilot3
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas       529 Jun  5 07:36 boinc_task_state.xml
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas 175296011 Jun  5 07:36 HITS.45006595._057083.pool.root.1
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas      1025 Jun  5 07:36 memory_monitor_summary.json
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas    305922 Jun  5 07:36 log.45006595._057083.job.log.tgz.1
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas      7691 Jun  5 07:36 heartbeat.json
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 07:37 init_data.xml
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 07:37 boinc_mmap_file
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas        27 Jun  5 07:37 wrapper_checkpoint.txt
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas        95 Jun  5 07:37 pilot_heartbeat.json
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas       823 Jun  5 07:37 pilotlog.txt
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas    401831 Jun  5 07:37 log.45006595._057083.job.log.1
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas       357 Jun  5 07:37 output.list
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas       620 Jun  5 07:37 runtime_log
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas    727040 Jun  5 07:37 result.tar.gz
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas      8660 Jun  5 07:37 runtime_log.err
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas       652 Jun  5 07:37 dvCMDmS3Mh7n9Rq4apOajLDm4fhM0noT9bVof3QYDm34aKDmCLZYqn.diag
[2025-06-05 07:37:30] -rw-r--r--. 1 boincer umatlas     21470 Jun  5 07:37 stderr.txt
[2025-06-05 07:37:30] HITS file was successfully produced:
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas 175296011 Jun  5 07:36 shared/HITS.pool.root.1
[2025-06-05 07:37:30]  *** Contents of shared directory: ***
[2025-06-05 07:37:30] total 383472
[2025-06-05 07:37:30] -rw-r--r--. 2 boincer umatlas 216084338 Jun  5 06:31 ATLAS.root_0
[2025-06-05 07:37:30] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 06:31 start_atlas.sh
[2025-06-05 07:37:30] -rw-r--r--. 2 boincer umatlas    541918 Jun  5 06:31 input.tar.gz
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas 175296011 Jun  5 07:36 HITS.pool.root.1
[2025-06-05 07:37:30] -rw-------. 1 boincer umatlas    727040 Jun  5 07:37 result.tar.gz
07:37:32 (3667470): run_atlas exited; CPU time 27639.191581
07:37:32 (3667470): called boinc_finish(0)

</stderr_txt>
]]>

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