Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:13:58 (1914165): wrapper (7.7.26015): starting
08:13:58 (1914165): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 08:13:58] Arguments: --nthreads 4
[2025-06-06 08:13:58] Threads: 4
[2025-06-06 08:13:58] Checking for CVMFS
[2025-06-06 08:13:58] No cvmfs_config command found, will try listing directly
[2025-06-06 08:13:58] CVMFS is ok
[2025-06-06 08:13:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 08:13:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 08:13:58] Further information can be found at the LHC@home message board.
[2025-06-06 08:13:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 08:13:58] Checking for apptainer binary...
[2025-06-06 08:13:58] which: no apptainer in ((null))
[2025-06-06 08:13:58] apptainer is not installed, using version from CVMFS
[2025-06-06 08:13:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 08:13:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-06 08:13:58] apptainer works
[2025-06-06 08:13:58] Set ATHENA_PROC_NUMBER=4
[2025-06-06 08:13:58] Set ATHENA_CORE_NUMBER=4
[2025-06-06 08:13:58] Starting ATLAS job with PandaID=6668687111
[2025-06-06 08:13:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:30:32]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:30:32] 2025-06-06 09:28:37,193 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 11:30:32] 2025-06-06 09:28:38,688 | INFO     | PID=1917820 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 11:30:32] 2025-06-06 09:28:38,688 | INFO     | .. there are 2 such processes running
[2025-06-06 11:30:32] 2025-06-06 09:28:38,991 | WARNING  | process 1924713 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 11:30:32] 2025-06-06 09:28:38,991 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6668687111/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:30:32] 2025-06-06 09:28:39,233 | INFO     | number of running child processes to parent process 1924713: 1
[2025-06-06 11:30:32] 2025-06-06 09:28:39,234 | INFO     | maximum number of monitored processes: 6
[2025-06-06 11:30:32] 2025-06-06 09:28:41,502 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 11:30:32] 2025-06-06 09:28:41,503 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6668687111/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,504 | INFO     | extracted standard info from prmon json
[2025-06-06 11:30:32] 2025-06-06 09:28:41,504 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:30:32] 2025-06-06 09:28:41,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:30:32] 2025-06-06 09:28:41,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:30:32] 2025-06-06 09:28:41,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:30:32] 2025-06-06 09:28:41,506 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:30:32] 2025-06-06 09:28:41,507 | INFO     | sum of square deviations: 2160561440.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,507 | INFO     | sum of deviations: 40177906565.99999
[2025-06-06 11:30:32] 2025-06-06 09:28:41,507 | INFO     | mean x: 1749196266.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,507 | INFO     | mean y: 2338602.5392670156
[2025-06-06 11:30:32] 2025-06-06 09:28:41,508 | INFO     | -- intersect: -32525801000.35213
[2025-06-06 11:30:32] 2025-06-06 09:28:41,508 | INFO     | intersect: -32525801000.35213
[2025-06-06 11:30:32] 2025-06-06 09:28:41,508 | INFO     | chi2: 1.6869154277994698
[2025-06-06 11:30:32] 2025-06-06 09:28:41,508 | INFO     | sum of square deviations: 1995283922.5
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | sum of deviations: 39315367450.49999
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | mean x: 1749196113.5
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | mean y: 2337806.5430107526
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | -- intersect: -34464079313.218544
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | intersect: -34464079313.218544
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | chi2: 1.6864606870469205
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | current chi2=1.6864606870469205 (change=0.026956938389166893 %)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,509 | INFO     | right removable region: 185
[2025-06-06 11:30:32] 2025-06-06 09:28:41,510 | INFO     | sum of square deviations: 1995283922.5
[2025-06-06 11:30:32] 2025-06-06 09:28:41,510 | INFO     | sum of deviations: 6959849534.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,510 | INFO     | mean x: 1749196418.5
[2025-06-06 11:30:32] 2025-06-06 09:28:41,510 | INFO     | mean y: 2368985.8387096776
[2025-06-06 11:30:32] 2025-06-06 09:28:41,511 | INFO     | -- intersect: -6099090430.983556
[2025-06-06 11:30:32] 2025-06-06 09:28:41,511 | INFO     | intersect: -6099090430.983556
[2025-06-06 11:30:32] 2025-06-06 09:28:41,511 | INFO     | chi2: 0.010876859164724088
[2025-06-06 11:30:32] 2025-06-06 09:28:41,511 | INFO     | current chi2=0.010876859164724088 (change=99.35522202325741 %)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,511 | INFO     | sum of square deviations: 1838657730.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | sum of deviations: 5144740549.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | mean x: 1749196571.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | mean y: 2370748.2099447516
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | -- intersect: -4892048903.780128
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | intersect: -4892048903.780128
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | chi2: 0.008556279654852011
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | current chi2=0.008556279654852011 (change=21.33501477520457 %)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,512 | INFO     | left removable region: 20
[2025-06-06 11:30:32] 2025-06-06 09:28:41,513 | INFO     | sum of square deviations: 1392881930.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,513 | INFO     | sum of deviations: 3715716302.0000014
[2025-06-06 11:30:32] 2025-06-06 09:28:41,513 | INFO     | mean x: 1749196693.0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,513 | INFO     | mean y: 2372541.1333333333
[2025-06-06 11:30:32] 2025-06-06 09:28:41,513 | INFO     | -- intersect: -4663865513.64895
[2025-06-06 11:30:32] 2025-06-06 09:28:41,513 | INFO     | intersect: -4663865513.64895
[2025-06-06 11:30:32] 2025-06-06 09:28:41,514 | INFO     | chi2: 0.007771805377953947
[2025-06-06 11:30:32] 2025-06-06 09:28:41,514 | INFO     | -- intersect: -4663865513.64895
[2025-06-06 11:30:32] 2025-06-06 09:28:41,514 | INFO     | current memory leak: 2.67 B/s (using 165 data points, chi2=0.01)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,514 | INFO     | ..............................
[2025-06-06 11:30:32] 2025-06-06 09:28:41,514 | INFO     | . Timing measurements:
[2025-06-06 11:30:32] 2025-06-06 09:28:41,514 | INFO     | . get job = 0 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,514 | INFO     | . initial setup = 1 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,515 | INFO     | . payload setup = 6 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,515 | INFO     | . stage-in = 0 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,515 | INFO     | . payload execution = 11642 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,515 | INFO     | . stage-out = 0 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,515 | INFO     | . log creation = 0 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,515 | INFO     | ..............................
[2025-06-06 11:30:32] 2025-06-06 09:28:41,706 | INFO     | 
[2025-06-06 11:30:32] 2025-06-06 09:28:41,706 | INFO     | job summary report
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | --------------------------------------------------
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | PanDA job id: 6668687111
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | task id: 44871837
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | errors: (none)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | pilot state: finished 
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | transexitcode: 0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,707 | INFO     | exeerrorcode: 0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | exeerrordiag: 
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | exitcode: 0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | exitmsg: OK
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | cpuconsumptiontime: 44910 s
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | nevents: 400
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | neventsw: 0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | pid: 1924713
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | pgrp: 1924713
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | corecount: 4
[2025-06-06 11:30:32] 2025-06-06 09:28:41,708 | INFO     | event service: False
[2025-06-06 11:30:32] 2025-06-06 09:28:41,709 | INFO     | sizes: {0: 2397288, 1: 2397430, 4: 2397636, 11: 2397664, 11652: 2426883, 11654: 2436030, 11659: 2436144}
[2025-06-06 11:30:32] 2025-06-06 09:28:41,709 | INFO     | --------------------------------------------------
[2025-06-06 11:30:32] 2025-06-06 09:28:41,709 | INFO     | 
[2025-06-06 11:30:32] 2025-06-06 09:28:41,709 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-06 11:30:32] 2025-06-06 09:28:41,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:30:32] 2025-06-06 09:28:41,727 | INFO     | job 6668687111 has completed (purged errors)
[2025-06-06 11:30:32] 2025-06-06 09:28:41,727 | INFO     | overall cleanup function is called
[2025-06-06 11:30:32] 2025-06-06 09:28:42,735 | INFO     | --- collectZombieJob: --- 10, [1924713]
[2025-06-06 11:30:32] 2025-06-06 09:28:42,736 | INFO     | zombie collector waiting for pid 1924713
[2025-06-06 11:30:32] 2025-06-06 09:28:42,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:30:32] 2025-06-06 09:28:42,736 | INFO     | collected zombie processes
[2025-06-06 11:30:32] 2025-06-06 09:28:42,736 | INFO     | will attempt to kill all subprocesses of pid=1924713
[2025-06-06 11:30:32] 2025-06-06 09:28:42,905 | INFO     | process IDs to be killed: [1924713] (in reverse order)
[2025-06-06 11:30:32] 2025-06-06 09:28:42,973 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:30:32] 2025-06-06 09:28:42,974 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:30:32] 2025-06-06 09:28:42,980 | INFO     | did not find any defunct processes belonging to 1924713
[2025-06-06 11:30:32] 2025-06-06 09:28:42,986 | INFO     | did not find any defunct processes belonging to 1924713
[2025-06-06 11:30:32] 2025-06-06 09:28:42,986 | INFO     | ready for new job
[2025-06-06 11:30:32] 2025-06-06 09:28:42,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:30:32] 2025-06-06 09:28:42,988 | INFO     | **************************************
[2025-06-06 11:30:32] 2025-06-06 09:28:42,988 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:30:32] 2025-06-06 09:28:42,988 | INFO     | **************************************
[2025-06-06 11:30:32] 2025-06-06 09:28:42,988 | INFO     | 
[2025-06-06 11:30:32] 2025-06-06 09:28:42,991 | INFO     | architecture information:
[2025-06-06 11:30:32] 2025-06-06 09:28:42,991 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:30:32] 2025-06-06 09:28:43,001 | INFO     | cat /etc/os-release:
[2025-06-06 11:30:32] NAME="CentOS Linux"
[2025-06-06 11:30:32] VERSION="7 (Core)"
[2025-06-06 11:30:32] ID="centos"
[2025-06-06 11:30:32] ID_LIKE="rhel fedora"
[2025-06-06 11:30:32] VERSION_ID="7"
[2025-06-06 11:30:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:30:32] ANSI_COLOR="0;31"
[2025-06-06 11:30:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:30:32] HOME_URL="https://www.centos.org/"
[2025-06-06 11:30:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:30:32] 
[2025-06-06 11:30:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:30:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:30:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:30:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:30:32] 
[2025-06-06 11:30:32] 2025-06-06 09:28:43,001 | INFO     | **************************************
[2025-06-06 11:30:32] 2025-06-06 09:28:43,504 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-06 11:30:32] 2025-06-06 09:28:43,513 | INFO     | sufficient remaining disk space (1658187677696 B)
[2025-06-06 11:30:32] 2025-06-06 09:28:43,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:30:32] 2025-06-06 09:28:43,514 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:30:32] 2025-06-06 09:28:43,514 | INFO     | update_server=False
[2025-06-06 11:30:32] 2025-06-06 09:28:43,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:30:32] 2025-06-06 09:28:43,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:30:32] 2025-06-06 09:28:43,514 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 11:30:32] 2025-06-06 09:28:43,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:30:32] 2025-06-06 09:28:43,515 | INFO     | aborting loop
[2025-06-06 11:30:32] 2025-06-06 09:28:43,515 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:30:32] 2025-06-06 09:28:43,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:30:32] 2025-06-06 09:28:43,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:30:32] 2025-06-06 09:28:43,681 | INFO     | all job control threads have been joined
[2025-06-06 11:30:32] 2025-06-06 09:28:43,749 | INFO     | all data control threads have been joined
[2025-06-06 11:30:32] 2025-06-06 09:28:44,060 | INFO     | all payload control threads have been joined
[2025-06-06 11:30:32] 2025-06-06 09:28:44,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:30:32] 2025-06-06 09:28:44,519 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,521 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,521 | INFO     | [job] validate thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,521 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,631 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,687 | INFO     | [job] control thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,689 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,755 | INFO     | [data] control thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:44,992 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:45,063 | INFO     | [payload] control thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:45,183 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:45,433 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:45,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:45,969 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:46,329 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:46,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:30:32] 2025-06-06 09:28:50,934 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:30:32] 2025-06-06 09:28:51,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23073761855296)>', '<ExcThread(monitor, started 23073522677504)>']
[2025-06-06 11:30:32] 2025-06-06 09:28:52,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:30:32] 2025-06-06 09:28:52,562 | INFO     | [monitor] control thread has ended
[2025-06-06 11:30:32] 2025-06-06 09:28:56,601 | INFO     | all workflow threads have been joined
[2025-06-06 11:30:32] 2025-06-06 09:28:56,602 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:30:32] 2025-06-06 09:28:56,602 | INFO     | traces error code: 0
[2025-06-06 11:30:32] 2025-06-06 09:28:56,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:30:32] 2025-06-06 09:28:56,708 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:30:32] 2025-06-06 09:28:56,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:30:32] 2025-06-06 09:28:56,711 [wrapper] pilotpid: 1917820
[2025-06-06 11:30:32] 2025-06-06 09:28:56,713 [wrapper] Pilot exit status: 0
[2025-06-06 11:30:32] 2025-06-06 09:28:56,720 [wrapper] pandaids: 6668687111
[2025-06-06 11:30:32] 2025-06-06 09:28:56,749 [wrapper] cleanup supervisor_pilot 2042629 1917821
[2025-06-06 11:30:32] 2025-06-06 09:28:56,752 [wrapper] Test setup, not cleaning
[2025-06-06 11:30:32] 2025-06-06 09:28:56,754 [wrapper] apfmon messages muted
[2025-06-06 11:30:32] 2025-06-06 09:28:56,756 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:30:32] 2025-06-06 09:28:56,758 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:30:32]  *** Error codes and diagnostics ***
[2025-06-06 11:30:32]     "exeErrorCode": 0,
[2025-06-06 11:30:32]     "exeErrorDiag": "",
[2025-06-06 11:30:32]     "pilotErrorCode": 0,
[2025-06-06 11:30:32]     "pilotErrorDiag": "",
[2025-06-06 11:30:32]  *** Listing of results directory ***
[2025-06-06 11:30:32] total 420080
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc    495897 May 28 17:15 pilot3.tar.gz
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc      5111 May 28 17:39 queuedata.json
[2025-06-06 11:30:32] -rwx------ 1 boinc boinc     37140 May 28 17:41 runpilot2-wrapper.sh
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc       100 Jun  6 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:30:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 08:13 run_atlas
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc       105 Jun  6 08:13 job.xml
[2025-06-06 11:30:32] -rw-r--r-- 2 boinc boinc 223800463 Jun  6 08:13 EVNT.44871834._003369.pool.root.1
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc      6419 Jun  6 08:13 init_data.xml
[2025-06-06 11:30:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:13 start_atlas.sh
[2025-06-06 11:30:32] drwxrwx--x 2 boinc boinc      4096 Jun  6 08:13 shared
[2025-06-06 11:30:32] -rw-r--r-- 2 boinc boinc    508880 Jun  6 08:13 input.tar.gz
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc         0 Jun  6 08:13 boinc_lockfile
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc      2558 Jun  6 08:13 pandaJob.out
[2025-06-06 11:30:32] -rw------- 1 boinc boinc    988109 Jun  6 08:14 agis_schedconf.cvmfs.json
[2025-06-06 11:30:32] drwx------ 4 boinc boinc      4096 Jun  6 08:14 pilot3
[2025-06-06 11:30:32] -rw------- 1 boinc boinc 199738883 Jun  6 11:28 HITS.44871837._086504.pool.root.1
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc       529 Jun  6 11:28 boinc_task_state.xml
[2025-06-06 11:30:32] -rw------- 1 boinc boinc      1035 Jun  6 11:28 memory_monitor_summary.json
[2025-06-06 11:30:32] -rw------- 1 boinc boinc   1598969 Jun  6 11:28 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:30:32] -rw------- 1 boinc boinc    303599 Jun  6 11:28 log.44871837._086504.job.log.tgz.1
[2025-06-06 11:30:32] -rw------- 1 boinc boinc        95 Jun  6 11:28 pilot_heartbeat.json
[2025-06-06 11:30:32] -rw------- 1 boinc boinc      7731 Jun  6 11:28 heartbeat.json
[2025-06-06 11:30:32] -rw------- 1 boinc boinc      4487 Jun  6 11:28 pilotlog.txt
[2025-06-06 11:30:32] -rw------- 1 boinc boinc   1092828 Jun  6 11:28 log.44871837._086504.job.log.1
[2025-06-06 11:30:32] -rw------- 1 boinc boinc       357 Jun  6 11:28 output.list
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc       620 Jun  6 11:28 runtime_log
[2025-06-06 11:30:32] -rw------- 1 boinc boinc   1413120 Jun  6 11:28 result.tar.gz
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc      9026 Jun  6 11:28 runtime_log.err
[2025-06-06 11:30:32] -rw------- 1 boinc boinc       664 Jun  6 11:28 SYyMDmY5Xe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyTcKDmv9BePm.diag
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc        26 Jun  6 11:30 wrapper_checkpoint.txt
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc      8192 Jun  6 11:30 boinc_mmap_file
[2025-06-06 11:30:32] -rw-r--r-- 1 boinc boinc     21075 Jun  6 11:30 stderr.txt
[2025-06-06 11:30:32] HITS file was successfully produced:
[2025-06-06 11:30:32] -rw------- 1 boinc boinc 199738883 Jun  6 11:28 shared/HITS.pool.root.1
[2025-06-06 11:30:32]  *** Contents of shared directory: ***
[2025-06-06 11:30:32] total 415516
[2025-06-06 11:30:32] -rw-r--r-- 2 boinc boinc 223800463 Jun  6 08:13 ATLAS.root_0
[2025-06-06 11:30:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:13 start_atlas.sh
[2025-06-06 11:30:32] -rw-r--r-- 2 boinc boinc    508880 Jun  6 08:13 input.tar.gz
[2025-06-06 11:30:32] -rw------- 1 boinc boinc 199738883 Jun  6 11:28 HITS.pool.root.1
[2025-06-06 11:30:32] -rw------- 1 boinc boinc   1413120 Jun  6 11:28 result.tar.gz
11:30:34 (1914165): run_atlas exited; CPU time 45332.792524
11:30:34 (1914165): called boinc_finish(0)

</stderr_txt>
]]>

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