Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:01:45 (2742747): wrapper (7.7.26015): starting
06:01:45 (2742747): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:01:45] Arguments: --nthreads 8
[2025-06-05 06:01:45] Threads: 8
[2025-06-05 06:01:45] Checking for CVMFS
[2025-06-05 06:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:01:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:01:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:01:46] 2.12.6.0 1685548 24588 461464 146814 0 519 30921137 32947201 18540 16776704 0 127468585 99.694 98481845 27540 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 06:01:46] CVMFS is ok
[2025-06-05 06:01:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:01:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:01:46] Further information can be found at the LHC@home message board.
[2025-06-05 06:01:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:01:46] Checking for apptainer binary...
[2025-06-05 06:01:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:01:46] Running /usr/bin/apptainer --version
[2025-06-05 06:01:46] apptainer version 1.4.1-1.el9
[2025-06-05 06:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:01:46] c6-6-8-2.aglt2.org
[2025-06-05 06:01:46] apptainer works
[2025-06-05 06:01:46] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:01:46] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:01:46] Starting ATLAS job with PandaID=6667925160
[2025-06-05 06:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:25:31]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:25:31] 2025-06-05 12:25:10,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:25:31] 2025-06-05 12:25:10,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:25:31] 2025-06-05 12:25:10,340 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:25:31] 2025-06-05 12:25:10,343 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:25:31] 2025-06-05 12:25:10,343 | INFO     | sum of square deviations: 869186316.9929086
[2025-06-05 08:25:31] 2025-06-05 12:25:10,344 | INFO     | sum of deviations: 4827430329.609927
[2025-06-05 08:25:31] 2025-06-05 12:25:10,344 | INFO     | mean x: 1749122014.0070922
[2025-06-05 08:25:31] 2025-06-05 12:25:10,345 | INFO     | mean y: 2188776.390070922
[2025-06-05 08:25:31] 2025-06-05 12:25:10,345 | INFO     | -- intersect: -9712373562.578648
[2025-06-05 08:25:31] 2025-06-05 12:25:10,345 | INFO     | intersect: -9712373562.578648
[2025-06-05 08:25:31] 2025-06-05 12:25:10,345 | INFO     | chi2: 2.167579710869937
[2025-06-05 08:25:31] 2025-06-05 12:25:10,345 | INFO     | sum of square deviations: 779957041.9926479
[2025-06-05 08:25:31] 2025-06-05 12:25:10,346 | INFO     | sum of deviations: 12226209420.389704
[2025-06-05 08:25:31] 2025-06-05 12:25:10,346 | INFO     | mean x: 1749121861.5073528
[2025-06-05 08:25:31] 2025-06-05 12:25:10,346 | INFO     | mean y: 2201037.1102941176
[2025-06-05 08:25:31] 2025-06-05 12:25:10,346 | INFO     | -- intersect: -27416142575.681084
[2025-06-05 08:25:31] 2025-06-05 12:25:10,346 | INFO     | intersect: -27416142575.681084
[2025-06-05 08:25:31] 2025-06-05 12:25:10,347 | INFO     | chi2: 1.5139716426491359
[2025-06-05 08:25:31] 2025-06-05 12:25:10,347 | INFO     | current chi2=1.5139716426491359 (change=30.153819254862924 %)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,347 | INFO     | sum of square deviations: 697053466.9923683
[2025-06-05 08:25:31] 2025-06-05 12:25:10,348 | INFO     | sum of deviations: 11385671629.595413
[2025-06-05 08:25:31] 2025-06-05 12:25:10,348 | INFO     | mean x: 1749121709.0076337
[2025-06-05 08:25:31] 2025-06-05 12:25:10,348 | INFO     | mean y: 2199484.4045801526
[2025-06-05 08:25:31] 2025-06-05 12:25:10,348 | INFO     | -- intersect: -28567955262.671227
[2025-06-05 08:25:31] 2025-06-05 12:25:10,348 | INFO     | intersect: -28567955262.671227
[2025-06-05 08:25:31] 2025-06-05 12:25:10,348 | INFO     | chi2: 1.515239751886623
[2025-06-05 08:25:31] 2025-06-05 12:25:10,348 | INFO     | current chi2=1.515239751886623 (change=-0.08376043525281458 %)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,349 | INFO     | right removable region: 130
[2025-06-05 08:25:31] 2025-06-05 12:25:10,349 | INFO     | sum of square deviations: 779956431.9926479
[2025-06-05 08:25:31] 2025-06-05 12:25:10,350 | INFO     | sum of deviations: -13027214937.588236
[2025-06-05 08:25:31] 2025-06-05 12:25:10,350 | INFO     | mean x: 1749122166.5073528
[2025-06-05 08:25:31] 2025-06-05 12:25:10,350 | INFO     | mean y: 2218833.588235294
[2025-06-05 08:25:31] 2025-06-05 12:25:10,350 | INFO     | -- intersect: 29216915296.795395
[2025-06-05 08:25:31] 2025-06-05 12:25:10,350 | INFO     | intersect: 29216915296.795395
[2025-06-05 08:25:31] 2025-06-05 12:25:10,350 | INFO     | chi2: 0.8640045678171184
[2025-06-05 08:25:31] 2025-06-05 12:25:10,350 | INFO     | current chi2=0.8640045678171184 (change=60.13966344654709 %)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,351 | INFO     | sum of square deviations: 697052246.9923683
[2025-06-05 08:25:31] 2025-06-05 12:25:10,351 | INFO     | sum of deviations: -6147477069.801527
[2025-06-05 08:25:31] 2025-06-05 12:25:10,351 | INFO     | mean x: 1749122319.0076337
[2025-06-05 08:25:31] 2025-06-05 12:25:10,351 | INFO     | mean y: 2206145.8015267174
[2025-06-05 08:25:31] 2025-06-05 12:25:10,352 | INFO     | -- intersect: 15428150750.05904
[2025-06-05 08:25:31] 2025-06-05 12:25:10,352 | INFO     | intersect: 15428150750.05904
[2025-06-05 08:25:31] 2025-06-05 12:25:10,352 | INFO     | chi2: 0.7736450076716762
[2025-06-05 08:25:31] 2025-06-05 12:25:10,352 | INFO     | current chi2=0.7736450076716762 (change=10.458227133420477 %)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,352 | INFO     | left removable region: 20
[2025-06-05 08:25:31] 2025-06-05 12:25:10,352 | INFO     | sum of square deviations: 412684185.4909094
[2025-06-05 08:25:31] 2025-06-05 12:25:10,353 | INFO     | sum of deviations: 1996253337.236364
[2025-06-05 08:25:31] 2025-06-05 12:25:10,353 | INFO     | mean x: 1749122288.509091
[2025-06-05 08:25:31] 2025-06-05 12:25:10,353 | INFO     | mean y: 2216200.7636363637
[2025-06-05 08:25:31] 2025-06-05 12:25:10,353 | INFO     | -- intersect: -8458711861.011325
[2025-06-05 08:25:31] 2025-06-05 12:25:10,353 | INFO     | intersect: -8458711861.011325
[2025-06-05 08:25:31] 2025-06-05 12:25:10,353 | INFO     | chi2: 0.02887821752446514
[2025-06-05 08:25:31] 2025-06-05 12:25:10,354 | INFO     | -- intersect: -8458711861.011325
[2025-06-05 08:25:31] 2025-06-05 12:25:10,354 | INFO     | current memory leak: 4.84 B/s (using 110 data points, chi2=0.03)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,354 | INFO     | ..............................
[2025-06-05 08:25:31] 2025-06-05 12:25:10,354 | INFO     | . Timing measurements:
[2025-06-05 08:25:31] 2025-06-05 12:25:10,354 | INFO     | . get job = 0 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,355 | INFO     | . initial setup = 2 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,355 | INFO     | . payload setup = 7 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,355 | INFO     | . stage-in = 0 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,355 | INFO     | . payload execution = 8557 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,355 | INFO     | . stage-out = 0 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,355 | INFO     | . log creation = 0 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,355 | INFO     | ..............................
[2025-06-05 08:25:31] 2025-06-05 12:25:10,459 | INFO     | 
[2025-06-05 08:25:31] 2025-06-05 12:25:10,459 | INFO     | job summary report
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | --------------------------------------------------
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | PanDA job id: 6667925160
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | task id: 44871837
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | errors: (none)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | pilot state: finished 
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | transexitcode: 0
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | exeerrorcode: 0
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | exeerrordiag: 
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | exitcode: 0
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | exitmsg: OK
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | cpuconsumptiontime: 55074 s
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | nevents: 400
[2025-06-05 08:25:31] 2025-06-05 12:25:10,460 | INFO     | neventsw: 0
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | pid: 2752805
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | pgrp: 2752805
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | corecount: 8
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | event service: False
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | sizes: {0: 2397390, 5: 2397596, 11: 2397652, 8568: 2425410, 8570: 2434407, 8578: 2434521}
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | --------------------------------------------------
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | 
[2025-06-05 08:25:31] 2025-06-05 12:25:10,461 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:25:31] 2025-06-05 12:25:10,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:25:31] 2025-06-05 12:25:10,483 | INFO     | job 6667925160 has completed (purged errors)
[2025-06-05 08:25:31] 2025-06-05 12:25:10,483 | INFO     | overall cleanup function is called
[2025-06-05 08:25:31] 2025-06-05 12:25:11,491 | INFO     | --- collectZombieJob: --- 10, [2752805]
[2025-06-05 08:25:31] 2025-06-05 12:25:11,491 | INFO     | zombie collector waiting for pid 2752805
[2025-06-05 08:25:31] 2025-06-05 12:25:11,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:25:31] 2025-06-05 12:25:11,491 | INFO     | collected zombie processes
[2025-06-05 08:25:31] 2025-06-05 12:25:11,491 | INFO     | will attempt to kill all subprocesses of pid=2752805
[2025-06-05 08:25:31] 2025-06-05 12:25:12,232 | INFO     | process IDs to be killed: [2752805] (in reverse order)
[2025-06-05 08:25:31] 2025-06-05 12:25:12,329 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:25:31] 2025-06-05 12:25:12,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:25:31] 2025-06-05 12:25:12,358 | INFO     | did not find any defunct processes belonging to 2752805
[2025-06-05 08:25:31] 2025-06-05 12:25:12,390 | INFO     | did not find any defunct processes belonging to 2752805
[2025-06-05 08:25:31] 2025-06-05 12:25:12,390 | INFO     | ready for new job
[2025-06-05 08:25:31] 2025-06-05 12:25:12,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:25:31] 2025-06-05 12:25:12,392 | INFO     | **************************************
[2025-06-05 08:25:31] 2025-06-05 12:25:12,392 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:25:31] 2025-06-05 12:25:12,392 | INFO     | **************************************
[2025-06-05 08:25:31] 2025-06-05 12:25:12,392 | INFO     | 
[2025-06-05 08:25:31] 2025-06-05 12:25:12,414 | INFO     | architecture information:
[2025-06-05 08:25:31] 2025-06-05 12:25:12,415 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:25:31] 2025-06-05 12:25:12,425 | INFO     | PID=2746334 has CPU usage=15.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:25:31] 2025-06-05 12:25:12,425 | INFO     | .. there are 13 such processes running
[2025-06-05 08:25:31] 2025-06-05 12:25:12,437 | INFO     | cat /etc/os-release:
[2025-06-05 08:25:31] NAME="CentOS Linux"
[2025-06-05 08:25:31] VERSION="7 (Core)"
[2025-06-05 08:25:31] ID="centos"
[2025-06-05 08:25:31] ID_LIKE="rhel fedora"
[2025-06-05 08:25:31] VERSION_ID="7"
[2025-06-05 08:25:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:25:31] ANSI_COLOR="0;31"
[2025-06-05 08:25:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:25:31] HOME_URL="https://www.centos.org/"
[2025-06-05 08:25:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:25:31] 
[2025-06-05 08:25:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:25:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:25:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:25:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:25:31] 
[2025-06-05 08:25:31] 2025-06-05 12:25:12,437 | INFO     | **************************************
[2025-06-05 08:25:31] 2025-06-05 12:25:12,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:25:31] 2025-06-05 12:25:12,958 | INFO     | sufficient remaining disk space (76111937536 B)
[2025-06-05 08:25:31] 2025-06-05 12:25:12,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:25:31] 2025-06-05 12:25:12,958 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:25:31] 2025-06-05 12:25:12,959 | INFO     | update_server=False
[2025-06-05 08:25:31] 2025-06-05 12:25:12,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:25:31] 2025-06-05 12:25:12,959 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:25:31] 2025-06-05 12:25:12,959 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:25:31] 2025-06-05 12:25:12,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:25:31] 2025-06-05 12:25:12,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:25:31] 2025-06-05 12:25:13,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:25:31] 2025-06-05 12:25:13,174 | INFO     | aborting loop
[2025-06-05 08:25:31] 2025-06-05 12:25:13,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:25:31] 2025-06-05 12:25:13,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:25:31] 2025-06-05 12:25:13,851 | INFO     | all data control threads have been joined
[2025-06-05 08:25:31] 2025-06-05 12:25:13,964 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,043 | INFO     | all payload control threads have been joined
[2025-06-05 08:25:31] 2025-06-05 12:25:14,180 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,561 | INFO     | all job control threads have been joined
[2025-06-05 08:25:31] 2025-06-05 12:25:14,605 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,826 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,835 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,856 | INFO     | [data] control thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,866 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,898 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:14,943 | INFO     | [job] validate thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:15,048 | INFO     | [payload] control thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:15,157 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:15,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:25:31] 2025-06-05 12:25:15,566 | INFO     | [job] control thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:15,594 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:16,479 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:17,838 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:23,244 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:25:31] 2025-06-05 12:25:24,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:25:31] 2025-06-05 12:25:25,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495386109760)>', '<ExcThread(monitor, started 140494755591936)>']
[2025-06-05 08:25:31] 2025-06-05 12:25:26,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:25:31] 2025-06-05 12:25:26,029 | INFO     | [monitor] control thread has ended
[2025-06-05 08:25:31] 2025-06-05 12:25:30,662 | INFO     | all workflow threads have been joined
[2025-06-05 08:25:31] 2025-06-05 12:25:30,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:25:31] 2025-06-05 12:25:30,662 | INFO     | traces error code: 0
[2025-06-05 08:25:31] 2025-06-05 12:25:30,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:25:31] 2025-06-05 12:25:30,848 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:25:31] 2025-06-05 12:25:30,852 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:25:31] 2025-06-05 12:25:30,854 [wrapper] pilotpid: 2746334
[2025-06-05 08:25:31] 2025-06-05 12:25:30,856 [wrapper] Pilot exit status: 0
[2025-06-05 08:25:31] 2025-06-05 12:25:30,865 [wrapper] pandaids: 6667925160
[2025-06-05 08:25:31] 2025-06-05 12:25:30,927 [wrapper] cleanup supervisor_pilot 3133793 2746335
[2025-06-05 08:25:31] 2025-06-05 12:25:30,930 [wrapper] Test setup, not cleaning
[2025-06-05 08:25:31] 2025-06-05 12:25:30,933 [wrapper] apfmon messages muted
[2025-06-05 08:25:31] 2025-06-05 12:25:30,936 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:25:31] 2025-06-05 12:25:30,938 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:25:31]  *** Error codes and diagnostics ***
[2025-06-05 08:25:31]     "exeErrorCode": 0,
[2025-06-05 08:25:31]     "exeErrorDiag": "",
[2025-06-05 08:25:31]     "pilotErrorCode": 0,
[2025-06-05 08:25:31]     "pilotErrorDiag": "",
[2025-06-05 08:25:31]  *** Listing of results directory ***
[2025-06-05 08:25:31] total 422184
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas      5111 May 28 00:00 queuedata.json
[2025-06-05 08:25:31] -rwx------ 1 boincer umatlas     37140 May 28 00:00 runpilot2-wrapper.sh
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas       100 Jun  5 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:25:31] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 06:01 run_atlas
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas       105 Jun  5 06:01 job.xml
[2025-06-05 08:25:31] -rw-r--r-- 2 boincer umatlas 224471838 Jun  5 06:01 EVNT.44871834._003063.pool.root.1
[2025-06-05 08:25:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 06:01 start_atlas.sh
[2025-06-05 08:25:31] drwxrwx--x 2 boincer umatlas      4096 Jun  5 06:01 shared
[2025-06-05 08:25:31] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 06:01 input.tar.gz
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas         0 Jun  5 06:01 boinc_lockfile
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 06:01 pandaJob.out
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas    983289 Jun  5 06:01 agis_schedconf.cvmfs.json
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas   1598969 Jun  5 06:01 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:25:31] drwx------ 4 boincer umatlas      4096 Jun  5 06:01 pilot3
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas      6856 Jun  5 08:22 init_data.xml
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas 201775719 Jun  5 08:24 HITS.44871837._078344.pool.root.1
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas       529 Jun  5 08:24 boinc_task_state.xml
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas        95 Jun  5 08:24 pilot_heartbeat.json
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas      1043 Jun  5 08:24 memory_monitor_summary.json
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas    332279 Jun  5 08:25 log.44871837._078344.job.log.tgz.1
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas      7718 Jun  5 08:25 heartbeat.json
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 08:25 boinc_mmap_file
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas      4944 Jun  5 08:25 pilotlog.txt
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas    782353 Jun  5 08:25 log.44871837._078344.job.log.1
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas       357 Jun  5 08:25 output.list
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas       620 Jun  5 08:25 runtime_log
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas   1136640 Jun  5 08:25 result.tar.gz
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas       654 Jun  5 08:25 usXNDmE9Me7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYsSKDmYfM88m.diag
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 08:25 runtime_log.err
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas        27 Jun  5 08:25 wrapper_checkpoint.txt
[2025-06-05 08:25:31] -rw-r--r-- 1 boincer umatlas     20970 Jun  5 08:25 stderr.txt
[2025-06-05 08:25:31] HITS file was successfully produced:
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas 201775719 Jun  5 08:24 shared/HITS.pool.root.1
[2025-06-05 08:25:31]  *** Contents of shared directory: ***
[2025-06-05 08:25:31] total 417896
[2025-06-05 08:25:31] -rw-r--r-- 2 boincer umatlas 224471838 Jun  5 06:01 ATLAS.root_0
[2025-06-05 08:25:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 06:01 start_atlas.sh
[2025-06-05 08:25:31] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 06:01 input.tar.gz
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas 201775719 Jun  5 08:24 HITS.pool.root.1
[2025-06-05 08:25:31] -rw------- 1 boincer umatlas   1136640 Jun  5 08:25 result.tar.gz
08:25:32 (2742747): run_atlas exited; CPU time 55346.634278
08:25:32 (2742747): called boinc_finish(0)

</stderr_txt>
]]>

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