Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:58:39 (4619): wrapper (7.7.26015): starting
05:58:39 (4619): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:58:39] Arguments: --nthreads 8
[2025-06-05 05:58:39] Threads: 8
[2025-06-05 05:58:39] Checking for CVMFS
[2025-06-05 05:58:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:58:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:58:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:58:39] 2.11.2.0 2791 8132 79716 146814 3 1 13748054 20275200 1 130560 0 2799206 99.985 1272311 45384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 05:58:39] CVMFS is ok
[2025-06-05 05:58:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:58:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:58:39] Further information can be found at the LHC@home message board.
[2025-06-05 05:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:58:39] Checking for apptainer binary...
[2025-06-05 05:58:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:58:39] Running /usr/bin/apptainer --version
[2025-06-05 05:58:39] apptainer version 1.3.2-1.el7
[2025-06-05 05:58:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:58:41] c-204-3.aglt2.org
[2025-06-05 05:58:41] apptainer works
[2025-06-05 05:58:41] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:58:41] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:58:41] Starting ATLAS job with PandaID=6667923999
[2025-06-05 05:58:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:37:42]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:37:42] 2025-06-05 12:37:26,665 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 08:37:42] 2025-06-05 12:37:26,665 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667923999/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:37:42] 2025-06-05 12:37:26,666 | INFO     | extracted standard info from prmon json
[2025-06-05 08:37:42] 2025-06-05 12:37:26,667 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:37:42] 2025-06-05 12:37:26,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:37:42] 2025-06-05 12:37:26,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:37:42] 2025-06-05 12:37:26,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:37:42] 2025-06-05 12:37:26,673 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:37:42] 2025-06-05 12:37:26,673 | INFO     | sum of square deviations: 1177156955.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,674 | INFO     | sum of deviations: 9687190460.999996
[2025-06-05 08:37:42] 2025-06-05 12:37:26,675 | INFO     | mean x: 1749122300.5
[2025-06-05 08:37:42] 2025-06-05 12:37:26,675 | INFO     | mean y: 2488485.6923076925
[2025-06-05 08:37:42] 2025-06-05 12:37:26,675 | INFO     | -- intersect: -14391582578.96531
[2025-06-05 08:37:42] 2025-06-05 12:37:26,675 | INFO     | intersect: -14391582578.96531
[2025-06-05 08:37:42] 2025-06-05 12:37:26,675 | INFO     | chi2: 2.2781894612994305
[2025-06-05 08:37:42] 2025-06-05 12:37:26,676 | INFO     | sum of square deviations: 1067554900.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,676 | INFO     | sum of deviations: 19494513895.000004
[2025-06-05 08:37:42] 2025-06-05 12:37:26,677 | INFO     | mean x: 1749122148.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,677 | INFO     | mean y: 2501756.205298013
[2025-06-05 08:37:42] 2025-06-05 12:37:26,677 | INFO     | -- intersect: -31938043894.644367
[2025-06-05 08:37:42] 2025-06-05 12:37:26,677 | INFO     | intersect: -31938043894.644367
[2025-06-05 08:37:42] 2025-06-05 12:37:26,677 | INFO     | chi2: 1.5128515124571786
[2025-06-05 08:37:42] 2025-06-05 12:37:26,677 | INFO     | current chi2=1.5128515124571786 (change=33.59413085888473 %)
[2025-06-05 08:37:42] 2025-06-05 12:37:26,678 | INFO     | sum of square deviations: 964976232.5
[2025-06-05 08:37:42] 2025-06-05 12:37:26,678 | INFO     | sum of deviations: 18729683878.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,678 | INFO     | mean x: 1749121995.5
[2025-06-05 08:37:42] 2025-06-05 12:37:26,679 | INFO     | mean y: 2500618.7671232875
[2025-06-05 08:37:42] 2025-06-05 12:37:26,679 | INFO     | -- intersect: -33947042319.609383
[2025-06-05 08:37:42] 2025-06-05 12:37:26,679 | INFO     | intersect: -33947042319.609383
[2025-06-05 08:37:42] 2025-06-05 12:37:26,679 | INFO     | chi2: 1.514685718797307
[2025-06-05 08:37:42] 2025-06-05 12:37:26,679 | INFO     | current chi2=1.514685718797307 (change=-0.12124166350928295 %)
[2025-06-05 08:37:42] 2025-06-05 12:37:26,679 | INFO     | right removable region: 145
[2025-06-05 08:37:42] 2025-06-05 12:37:26,680 | INFO     | sum of square deviations: 1067554900.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,680 | INFO     | sum of deviations: -13184164484.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,680 | INFO     | mean x: 1749122453.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,681 | INFO     | mean y: 2519812.450331126
[2025-06-05 08:37:42] 2025-06-05 12:37:26,681 | INFO     | -- intersect: 21603955132.55383
[2025-06-05 08:37:42] 2025-06-05 12:37:26,681 | INFO     | intersect: 21603955132.55383
[2025-06-05 08:37:42] 2025-06-05 12:37:26,681 | INFO     | chi2: 0.862740137233275
[2025-06-05 08:37:42] 2025-06-05 12:37:26,681 | INFO     | current chi2=0.862740137233275 (change=62.13044824019217 %)
[2025-06-05 08:37:42] 2025-06-05 12:37:26,681 | INFO     | sum of square deviations: 964976232.5
[2025-06-05 08:37:42] 2025-06-05 12:37:26,682 | INFO     | sum of deviations: -10972197551.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,682 | INFO     | mean x: 1749122605.5
[2025-06-05 08:37:42] 2025-06-05 12:37:26,682 | INFO     | mean y: 2516437.602739726
[2025-06-05 08:37:42] 2025-06-05 12:37:26,683 | INFO     | -- intersect: 19890797746.60984
[2025-06-05 08:37:42] 2025-06-05 12:37:26,683 | INFO     | intersect: 19890797746.60984
[2025-06-05 08:37:42] 2025-06-05 12:37:26,683 | INFO     | chi2: 0.8429165115900027
[2025-06-05 08:37:42] 2025-06-05 12:37:26,683 | INFO     | current chi2=0.8429165115900027 (change=2.297751638963362 %)
[2025-06-05 08:37:42] 2025-06-05 12:37:26,683 | INFO     | left removable region: 20
[2025-06-05 08:37:42] 2025-06-05 12:37:26,683 | INFO     | sum of square deviations: 605592750.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,684 | INFO     | sum of deviations: 3046655126.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,684 | INFO     | mean x: 1749122575.0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,684 | INFO     | mean y: 2523570.968
[2025-06-05 08:37:42] 2025-06-05 12:37:26,684 | INFO     | -- intersect: -8797075266.907898
[2025-06-05 08:37:42] 2025-06-05 12:37:26,685 | INFO     | intersect: -8797075266.907898
[2025-06-05 08:37:42] 2025-06-05 12:37:26,685 | INFO     | chi2: 0.0003240327807649892
[2025-06-05 08:37:42] 2025-06-05 12:37:26,685 | INFO     | -- intersect: -8797075266.907898
[2025-06-05 08:37:42] 2025-06-05 12:37:26,685 | INFO     | current memory leak: 5.03 B/s (using 125 data points, chi2=0.00)
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | ..............................
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | . Timing measurements:
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | . get job = 0 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | . initial setup = 3 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | . payload setup = 11 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | . stage-in = 0 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | . payload execution = 9465 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,686 | INFO     | . stage-out = 0 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,687 | INFO     | . log creation = 0 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,687 | INFO     | ..............................
[2025-06-05 08:37:42] 2025-06-05 12:37:26,976 | INFO     | 
[2025-06-05 08:37:42] 2025-06-05 12:37:26,976 | INFO     | job summary report
[2025-06-05 08:37:42] 2025-06-05 12:37:26,977 | INFO     | --------------------------------------------------
[2025-06-05 08:37:42] 2025-06-05 12:37:26,977 | INFO     | PanDA job id: 6667923999
[2025-06-05 08:37:42] 2025-06-05 12:37:26,977 | INFO     | task id: 44871837
[2025-06-05 08:37:42] 2025-06-05 12:37:26,977 | INFO     | errors: (none)
[2025-06-05 08:37:42] 2025-06-05 12:37:26,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:37:42] 2025-06-05 12:37:26,977 | INFO     | pilot state: finished 
[2025-06-05 08:37:42] 2025-06-05 12:37:26,978 | INFO     | transexitcode: 0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,978 | INFO     | exeerrorcode: 0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,978 | INFO     | exeerrordiag: 
[2025-06-05 08:37:42] 2025-06-05 12:37:26,978 | INFO     | exitcode: 0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,978 | INFO     | exitmsg: OK
[2025-06-05 08:37:42] 2025-06-05 12:37:26,979 | INFO     | cpuconsumptiontime: 71107 s
[2025-06-05 08:37:42] 2025-06-05 12:37:26,979 | INFO     | nevents: 400
[2025-06-05 08:37:42] 2025-06-05 12:37:26,979 | INFO     | neventsw: 0
[2025-06-05 08:37:42] 2025-06-05 12:37:26,979 | INFO     | pid: 14861
[2025-06-05 08:37:42] 2025-06-05 12:37:26,979 | INFO     | pgrp: 14861
[2025-06-05 08:37:42] 2025-06-05 12:37:26,979 | INFO     | corecount: 8
[2025-06-05 08:37:42] 2025-06-05 12:37:26,980 | INFO     | event service: False
[2025-06-05 08:37:42] 2025-06-05 12:37:26,980 | INFO     | sizes: {0: 2397165, 1: 2397420, 7: 2397626, 12: 2397654, 9480: 2425859, 9481: 2425858, 9482: 2434983, 9485: 2435039, 9491: 2435209}
[2025-06-05 08:37:42] 2025-06-05 12:37:26,980 | INFO     | --------------------------------------------------
[2025-06-05 08:37:42] 2025-06-05 12:37:26,980 | INFO     | 
[2025-06-05 08:37:42] 2025-06-05 12:37:26,980 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:37:42] 2025-06-05 12:37:27,008 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,009 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,009 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,009 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:37:42] 2025-06-05 12:37:27,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:37:42] 2025-06-05 12:37:27,013 | INFO     | job 6667923999 has completed (purged errors)
[2025-06-05 08:37:42] 2025-06-05 12:37:27,013 | INFO     | overall cleanup function is called
[2025-06-05 08:37:42] 2025-06-05 12:37:28,021 | INFO     | --- collectZombieJob: --- 10, [14861]
[2025-06-05 08:37:42] 2025-06-05 12:37:28,021 | INFO     | zombie collector waiting for pid 14861
[2025-06-05 08:37:42] 2025-06-05 12:37:28,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:37:42] 2025-06-05 12:37:28,037 | INFO     | collected zombie processes
[2025-06-05 08:37:42] 2025-06-05 12:37:28,037 | INFO     | will attempt to kill all subprocesses of pid=14861
[2025-06-05 08:37:42] 2025-06-05 12:37:28,128 | INFO     | process IDs to be killed: [14861] (in reverse order)
[2025-06-05 08:37:42] 2025-06-05 12:37:28,187 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:37:42] 2025-06-05 12:37:28,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:37:42] 2025-06-05 12:37:28,192 | INFO     | did not find any defunct processes belonging to 14861
[2025-06-05 08:37:42] 2025-06-05 12:37:28,195 | INFO     | did not find any defunct processes belonging to 14861
[2025-06-05 08:37:42] 2025-06-05 12:37:28,196 | INFO     | ready for new job
[2025-06-05 08:37:42] 2025-06-05 12:37:28,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:37:42] 2025-06-05 12:37:28,198 | INFO     | **************************************
[2025-06-05 08:37:42] 2025-06-05 12:37:28,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:37:42] 2025-06-05 12:37:28,198 | INFO     | **************************************
[2025-06-05 08:37:42] 2025-06-05 12:37:28,198 | INFO     | 
[2025-06-05 08:37:42] 2025-06-05 12:37:28,199 | INFO     | architecture information:
[2025-06-05 08:37:42] 2025-06-05 12:37:28,199 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:37:42] 2025-06-05 12:37:28,217 | INFO     | cat /etc/os-release:
[2025-06-05 08:37:42] NAME="CentOS Linux"
[2025-06-05 08:37:42] VERSION="7 (Core)"
[2025-06-05 08:37:42] ID="centos"
[2025-06-05 08:37:42] ID_LIKE="rhel fedora"
[2025-06-05 08:37:42] VERSION_ID="7"
[2025-06-05 08:37:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:37:42] ANSI_COLOR="0;31"
[2025-06-05 08:37:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:37:42] HOME_URL="https://www.centos.org/"
[2025-06-05 08:37:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:37:42] 
[2025-06-05 08:37:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:37:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:37:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:37:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:37:42] 
[2025-06-05 08:37:42] 2025-06-05 12:37:28,217 | INFO     | **************************************
[2025-06-05 08:37:42] 2025-06-05 12:37:28,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:37:42] 2025-06-05 12:37:28,740 | INFO     | sufficient remaining disk space (18612224000 B)
[2025-06-05 08:37:42] 2025-06-05 12:37:28,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:37:42] 2025-06-05 12:37:28,741 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:37:42] 2025-06-05 12:37:28,741 | INFO     | update_server=False
[2025-06-05 08:37:42] 2025-06-05 12:37:28,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:37:42] 2025-06-05 12:37:28,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:37:42] 2025-06-05 12:37:28,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:37:42] 2025-06-05 12:37:28,743 | INFO     | aborting loop
[2025-06-05 08:37:42] 2025-06-05 12:37:28,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:37:42] 2025-06-05 12:37:29,281 | INFO     | all data control threads have been joined
[2025-06-05 08:37:42] 2025-06-05 12:37:29,454 | INFO     | all job control threads have been joined
[2025-06-05 08:37:42] 2025-06-05 12:37:29,607 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:37:42] 2025-06-05 12:37:29,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:37:42] 2025-06-05 12:37:29,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:37:42] 2025-06-05 12:37:29,745 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:29,746 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:29,749 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:29,919 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,089 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,090 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,145 | INFO     | all payload control threads have been joined
[2025-06-05 08:37:42] 2025-06-05 12:37:30,287 | INFO     | [data] control thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,458 | INFO     | [job] control thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,475 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,698 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,747 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,751 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:30,885 | INFO     | [job] validate thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:31,150 | INFO     | [payload] control thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:31,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:37:42] 2025-06-05 12:37:35,550 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:37:42] 2025-06-05 12:37:37,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140584458721088)>', '<ExcThread(monitor, started 140583775483648)>']
[2025-06-05 08:37:42] 2025-06-05 12:37:37,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:37:42] 2025-06-05 12:37:37,650 | INFO     | [monitor] control thread has ended
[2025-06-05 08:37:42] 2025-06-05 12:37:42,234 | INFO     | all workflow threads have been joined
[2025-06-05 08:37:42] 2025-06-05 12:37:42,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:37:42] 2025-06-05 12:37:42,235 | INFO     | traces error code: 0
[2025-06-05 08:37:42] 2025-06-05 12:37:42,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:37:42] 2025-06-05 12:37:42,357 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:37:42] 2025-06-05 12:37:42,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:37:42] 2025-06-05 12:37:42,367 [wrapper] pilotpid: 8296
[2025-06-05 08:37:42] 2025-06-05 12:37:42,372 [wrapper] Pilot exit status: 0
[2025-06-05 08:37:42] 2025-06-05 12:37:42,392 [wrapper] pandaids: 6667923999
[2025-06-05 08:37:42] 2025-06-05 12:37:42,434 [wrapper] cleanup supervisor_pilot 20225 8297
[2025-06-05 08:37:42] 2025-06-05 12:37:42,439 [wrapper] Test setup, not cleaning
[2025-06-05 08:37:42] 2025-06-05 12:37:42,444 [wrapper] apfmon messages muted
[2025-06-05 08:37:42] 2025-06-05 12:37:42,449 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:37:42] 2025-06-05 12:37:42,453 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:37:42]  *** Error codes and diagnostics ***
[2025-06-05 08:37:42]     "exeErrorCode": 0,
[2025-06-05 08:37:42]     "exeErrorDiag": "",
[2025-06-05 08:37:42]     "pilotErrorCode": 0,
[2025-06-05 08:37:42]     "pilotErrorDiag": "",
[2025-06-05 08:37:42]  *** Listing of results directory ***
[2025-06-05 08:37:42] total 413432
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas      5111 May 27 23:50 queuedata.json
[2025-06-05 08:37:42] -rwx------ 1 boincer umatlas     37140 May 27 23:54 runpilot2-wrapper.sh
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas       100 Jun  5 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:37:42] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 05:58 run_atlas
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas       105 Jun  5 05:58 job.xml
[2025-06-05 08:37:42] -rw-r--r-- 2 boincer umatlas 223410783 Jun  5 05:58 EVNT.44871834._003056.pool.root.1
[2025-06-05 08:37:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:58 start_atlas.sh
[2025-06-05 08:37:42] drwxrwx--x 2 boincer umatlas      4096 Jun  5 05:58 shared
[2025-06-05 08:37:42] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 05:58 input.tar.gz
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas         0 Jun  5 05:58 boinc_lockfile
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 05:58 pandaJob.out
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas    983289 Jun  5 05:58 agis_schedconf.cvmfs.json
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas   1598969 Jun  5 05:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:37:42] drwx------ 4 boincer umatlas      4096 Jun  5 05:58 pilot3
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas      5824 Jun  5 08:28 init_data.xml
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas 193674595 Jun  5 08:36 HITS.44871837._078185.pool.root.1
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas       529 Jun  5 08:37 boinc_task_state.xml
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas        95 Jun  5 08:37 pilot_heartbeat.json
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas      1048 Jun  5 08:37 memory_monitor_summary.json
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 08:37 boinc_mmap_file
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas        27 Jun  5 08:37 wrapper_checkpoint.txt
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas    359008 Jun  5 08:37 log.44871837._078185.job.log.tgz.1
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas      7745 Jun  5 08:37 heartbeat.json
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas      4353 Jun  5 08:37 pilotlog.txt
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas    857832 Jun  5 08:37 log.44871837._078185.job.log.1
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas       357 Jun  5 08:37 output.list
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas       620 Jun  5 08:37 runtime_log
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas   1239040 Jun  5 08:37 result.tar.gz
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas       660 Jun  5 08:37 ZIeMDmN3Me7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AbKDmPQMB6n.diag
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas      8654 Jun  5 08:37 runtime_log.err
[2025-06-05 08:37:42] -rw-r--r-- 1 boincer umatlas     20772 Jun  5 08:37 stderr.txt
[2025-06-05 08:37:42] HITS file was successfully produced:
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas 193674595 Jun  5 08:36 shared/HITS.pool.root.1
[2025-06-05 08:37:42]  *** Contents of shared directory: ***
[2025-06-05 08:37:42] total 409048
[2025-06-05 08:37:42] -rw-r--r-- 2 boincer umatlas 223410783 Jun  5 05:58 ATLAS.root_0
[2025-06-05 08:37:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:58 start_atlas.sh
[2025-06-05 08:37:42] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 05:58 input.tar.gz
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas 193674595 Jun  5 08:36 HITS.pool.root.1
[2025-06-05 08:37:42] -rw------- 1 boincer umatlas   1239040 Jun  5 08:37 result.tar.gz
08:37:44 (4619): run_atlas exited; CPU time 71072.010223
08:37:44 (4619): called boinc_finish(0)

</stderr_txt>
]]>

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